Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2770 and GFF2771 are separated by 34 nucleotides GFF2771 and GFF2772 are separated by 41 nucleotides
GFF2770 - BUG/TctC family periplasmic protein, at 199,972 to 200,964
GFF2770
GFF2771 - BUG/TctC family periplasmic protein, at 200,999 to 201,970
GFF2771
GFF2772 - Site-specific tyrosine recombinase XerD, at 202,012 to 202,923
GFF2772
Position (kb) 200
201
202 Strain fitness (log2 ratio) -2
-1
0
1
2 at 200.036 kb on + strand at 200.141 kb on + strand, within GFF2770 at 200.141 kb on + strand, within GFF2770 at 200.141 kb on + strand, within GFF2770 at 200.142 kb on - strand, within GFF2770 at 200.142 kb on - strand, within GFF2770 at 200.142 kb on - strand, within GFF2770 at 200.142 kb on - strand, within GFF2770 at 200.216 kb on + strand, within GFF2770 at 200.216 kb on + strand, within GFF2770 at 200.216 kb on + strand, within GFF2770 at 200.217 kb on - strand, within GFF2770 at 200.217 kb on - strand, within GFF2770 at 200.217 kb on - strand, within GFF2770 at 200.396 kb on + strand, within GFF2770 at 200.396 kb on + strand, within GFF2770 at 200.396 kb on + strand, within GFF2770 at 200.396 kb on + strand, within GFF2770 at 200.397 kb on - strand, within GFF2770 at 200.397 kb on - strand, within GFF2770 at 200.397 kb on - strand, within GFF2770 at 200.579 kb on + strand, within GFF2770 at 200.579 kb on + strand, within GFF2770 at 200.579 kb on + strand, within GFF2770 at 200.579 kb on + strand, within GFF2770 at 200.579 kb on + strand, within GFF2770 at 200.579 kb on + strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 200.580 kb on - strand, within GFF2770 at 201.420 kb on + strand, within GFF2771 at 201.420 kb on + strand, within GFF2771 at 201.421 kb on - strand, within GFF2771 at 201.421 kb on - strand, within GFF2771 at 201.592 kb on + strand, within GFF2771 at 201.593 kb on - strand, within GFF2771 at 201.593 kb on - strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.594 kb on + strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.595 kb on - strand, within GFF2771 at 201.621 kb on + strand, within GFF2771 at 201.621 kb on + strand, within GFF2771 at 201.621 kb on + strand, within GFF2771 at 201.622 kb on - strand, within GFF2771 at 201.622 kb on - strand, within GFF2771 at 201.622 kb on - strand, within GFF2771 at 201.622 kb on - strand, within GFF2771 at 201.622 kb on - strand, within GFF2771 at 201.622 kb on - strand, within GFF2771 at 201.645 kb on + strand, within GFF2771 at 201.645 kb on + strand, within GFF2771 at 201.646 kb on - strand, within GFF2771 at 201.646 kb on - strand, within GFF2771 at 201.666 kb on + strand, within GFF2771 at 201.666 kb on + strand, within GFF2771 at 201.667 kb on - strand, within GFF2771 at 201.711 kb on + strand, within GFF2771 at 201.712 kb on - strand, within GFF2771 at 201.774 kb on + strand, within GFF2771 at 201.774 kb on + strand, within GFF2771 at 201.774 kb on + strand, within GFF2771 at 201.775 kb on - strand, within GFF2771 at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.073 kb on + strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.074 kb on - strand at 202.331 kb on + strand, within GFF2772 at 202.478 kb on + strand, within GFF2772 at 202.479 kb on - strand, within GFF2772 at 202.479 kb on - strand, within GFF2772 at 202.479 kb on - strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.661 kb on + strand, within GFF2772 at 202.662 kb on - strand, within GFF2772 at 202.662 kb on - strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.733 kb on + strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.734 kb on - strand, within GFF2772 at 202.935 kb on + strand at 202.936 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 200,036 + +0.2 200,141 + GFF2770 0.17 -1.5 200,141 + GFF2770 0.17 +0.2 200,141 + GFF2770 0.17 +0.9 200,142 - GFF2770 0.17 +1.4 200,142 - GFF2770 0.17 -0.6 200,142 - GFF2770 0.17 -0.4 200,142 - GFF2770 0.17 -0.6 200,216 + GFF2770 0.25 -0.5 200,216 + GFF2770 0.25 -0.6 200,216 + GFF2770 0.25 -0.7 200,217 - GFF2770 0.25 -0.2 200,217 - GFF2770 0.25 +1.0 200,217 - GFF2770 0.25 +0.5 200,396 + GFF2770 0.43 -1.0 200,396 + GFF2770 0.43 +0.0 200,396 + GFF2770 0.43 -0.7 200,396 + GFF2770 0.43 -0.5 200,397 - GFF2770 0.43 +0.7 200,397 - GFF2770 0.43 +0.6 200,397 - GFF2770 0.43 +0.1 200,579 + GFF2770 0.61 -0.5 200,579 + GFF2770 0.61 +0.5 200,579 + GFF2770 0.61 -0.6 200,579 + GFF2770 0.61 -0.1 200,579 + GFF2770 0.61 +0.9 200,579 + GFF2770 0.61 +0.7 200,580 - GFF2770 0.61 +0.9 200,580 - GFF2770 0.61 -0.3 200,580 - GFF2770 0.61 -1.0 200,580 - GFF2770 0.61 -0.6 200,580 - GFF2770 0.61 +1.3 200,580 - GFF2770 0.61 -0.8 200,580 - GFF2770 0.61 -0.6 200,580 - GFF2770 0.61 +0.4 201,420 + GFF2771 0.43 -0.8 201,420 + GFF2771 0.43 -0.1 201,421 - GFF2771 0.43 -1.4 201,421 - GFF2771 0.43 -0.2 201,592 + GFF2771 0.61 +0.6 201,593 - GFF2771 0.61 -0.4 201,593 - GFF2771 0.61 +0.8 201,594 + GFF2771 0.61 +0.2 201,594 + GFF2771 0.61 +1.1 201,594 + GFF2771 0.61 +1.4 201,594 + GFF2771 0.61 -0.1 201,594 + GFF2771 0.61 -0.6 201,594 + GFF2771 0.61 +0.1 201,594 + GFF2771 0.61 -1.0 201,594 + GFF2771 0.61 +1.1 201,594 + GFF2771 0.61 -0.8 201,595 - GFF2771 0.61 +0.9 201,595 - GFF2771 0.61 +0.3 201,595 - GFF2771 0.61 -0.4 201,595 - GFF2771 0.61 -0.3 201,595 - GFF2771 0.61 -0.2 201,595 - GFF2771 0.61 +0.4 201,595 - GFF2771 0.61 +0.4 201,595 - GFF2771 0.61 +0.2 201,595 - GFF2771 0.61 -0.9 201,595 - GFF2771 0.61 +0.7 201,621 + GFF2771 0.64 -0.6 201,621 + GFF2771 0.64 -0.3 201,621 + GFF2771 0.64 +0.4 201,622 - GFF2771 0.64 +0.1 201,622 - GFF2771 0.64 -0.5 201,622 - GFF2771 0.64 -0.1 201,622 - GFF2771 0.64 +1.4 201,622 - GFF2771 0.64 +0.3 201,622 - GFF2771 0.64 -0.5 201,645 + GFF2771 0.66 +0.7 201,645 + GFF2771 0.66 -0.8 201,646 - GFF2771 0.67 +0.1 201,646 - GFF2771 0.67 +0.1 201,666 + GFF2771 0.69 -0.1 201,666 + GFF2771 0.69 -1.1 201,667 - GFF2771 0.69 +0.4 201,711 + GFF2771 0.73 -0.5 201,712 - GFF2771 0.73 -1.5 201,774 + GFF2771 0.80 +0.2 201,774 + GFF2771 0.80 +0.9 201,774 + GFF2771 0.80 +2.3 201,775 - GFF2771 0.80 -2.0 202,073 + +0.6 202,073 + +1.1 202,073 + -0.6 202,073 + -1.5 202,073 + -0.9 202,073 + -1.3 202,074 - -1.5 202,074 - -0.3 202,074 - +0.1 202,074 - -1.1 202,074 - -1.0 202,074 - -0.5 202,074 - -0.2 202,331 + GFF2772 0.35 -1.4 202,478 + GFF2772 0.51 +0.2 202,479 - GFF2772 0.51 -0.5 202,479 - GFF2772 0.51 -0.4 202,479 - GFF2772 0.51 -1.7 202,661 + GFF2772 0.71 +2.7 202,661 + GFF2772 0.71 +1.1 202,661 + GFF2772 0.71 -0.3 202,661 + GFF2772 0.71 -0.6 202,662 - GFF2772 0.71 +0.6 202,662 - GFF2772 0.71 -0.7 202,733 + GFF2772 0.79 -0.5 202,733 + GFF2772 0.79 -1.8 202,733 + GFF2772 0.79 -1.3 202,733 + GFF2772 0.79 -0.8 202,733 + GFF2772 0.79 -1.6 202,733 + GFF2772 0.79 -1.4 202,733 + GFF2772 0.79 -0.0 202,733 + GFF2772 0.79 +0.7 202,733 + GFF2772 0.79 -1.2 202,734 - GFF2772 0.79 -0.9 202,734 - GFF2772 0.79 -2.5 202,734 - GFF2772 0.79 +0.4 202,734 - GFF2772 0.79 +0.3 202,734 - GFF2772 0.79 -0.2 202,734 - GFF2772 0.79 +0.1 202,734 - GFF2772 0.79 -0.3 202,734 - GFF2772 0.79 -2.7 202,935 + +0.1 202,936 - -0.5
Or see this region's nucleotide sequence