Strain Fitness in Variovorax sp. SCN45 around GFF776

Experiment: phage_bap4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage_bap4
48,267	+				-0.7
48,267	+				+0.2
48,267	+				+1.0
48,267	+				+1.0
48,267	+				-0.2
48,267	+				-0.5
48,267	+				-0.4
48,267	+				-0.1
48,267	+				-0.5
48,267	+				+0.1
48,268	-				+0.3
48,268	-				-0.1
48,268	-				-1.3
48,268	-				-0.5
48,268	-				+1.0
48,268	-				-0.3
48,271	+				-0.2
48,271	+				+2.2
48,272	-				-0.2
48,272	-				+0.9
48,378	+		GFF774	0.37	+0.0
48,379	-		GFF774	0.37	+0.8
48,379	-		GFF774	0.37	-0.0
48,379	-		GFF774	0.37	+0.1
48,379	-		GFF774	0.37	+0.9
48,379	-		GFF774	0.37	+0.5
48,459	+		GFF774	0.76	-0.3
48,459	+		GFF774	0.76	-1.6
48,459	+		GFF774	0.76	+0.5
48,460	-		GFF774	0.76	+0.1
48,460	-		GFF774	0.76	-0.5
48,460	-		GFF774	0.76	+0.8
48,460	-		GFF774	0.76	-0.5
48,460	-		GFF774	0.76	-0.6
48,460	-		GFF774	0.76	-1.8
48,460	-		GFF774	0.76	+0.7
48,545	-				-0.6
48,545	-				-0.1
48,581	+				-0.0
48,581	+				+0.3
48,581	+				+0.2
48,582	-				-0.1
48,582	-				-0.2
48,582	-				-0.5
48,582	-				+0.8
48,582	-				+0.9
48,582	-				-2.2
48,582	-				-0.3
48,582	-				+0.3
48,656	+		GFF775	0.18	-2.5
48,657	-		GFF775	0.18	-1.8
48,657	-		GFF775	0.18	-0.4
48,657	-		GFF775	0.18	-0.6
48,657	-		GFF775	0.18	+1.1
48,657	-		GFF775	0.18	-0.5
48,788	+		GFF775	0.67	-0.6
48,926	-				-0.2
48,929	+				+0.1
48,929	+				-0.8
48,930	-				-0.7
48,957	-				-0.3
48,957	-				-2.0
48,963	+				+0.1
48,963	+				+0.2
48,963	+				-0.1
48,963	+				-0.1
48,964	-				-0.4
48,964	-				-0.1
48,964	-				-2.3
48,964	-				-0.2
48,967	+				+0.9
48,967	+				-0.4
48,967	+				-0.1
48,967	+				-0.9
48,968	-				-0.3
48,968	-				-1.4
48,968	-				-0.8
48,968	-				-0.1
48,968	-				+0.5
48,968	-				-0.8
48,968	-				-0.0
48,970	+				-0.2
48,971	-				+0.1
49,025	+				+0.3
49,025	+				+0.2
49,025	+				+0.5
49,025	+				+0.2
49,025	+				+0.2
49,026	-				-0.1
49,026	-				+0.2
49,026	-				-0.8
49,046	+				-0.8
49,047	-				-0.7
49,098	+				-0.2
49,098	+				+0.5
49,099	-				+2.2
49,099	-				-0.5
49,114	+				-0.1
49,240	+				-0.5
49,240	+				-0.8
49,241	-				-1.2
49,241	-				-0.8
49,241	-				+0.4
49,241	-				+0.1
49,413	+				-0.1
49,413	+				-0.5
49,413	+				-0.5
49,413	+				+0.5
49,413	+				-0.1
49,413	+				+0.1
49,413	+				-0.1
49,414	-				-2.0
49,414	-				-1.5
49,414	-				-0.1
49,414	-				-0.1
49,581	+				-0.1
49,792	-				-0.2
49,792	-				-0.6
49,792	-				+2.1
49,792	-				+0.5
49,792	-				-0.2
49,965	+				-0.1
49,965	+				-1.1
49,965	+				+0.0
49,965	+				+0.5
49,966	-				+0.2
49,966	-				-0.6
49,966	-				-0.5
49,966	-				-0.1
49,981	+				-0.3
49,981	+				-0.2
49,982	-				-0.4
49,982	-				-0.5
49,982	-				-0.4
49,982	-				-0.6
49,982	-				+0.3
50,011	+				-0.3
50,204	+		GFF776	0.12	-0.1
50,204	+		GFF776	0.12	-0.9
50,205	-		GFF776	0.12	+0.2
50,370	+		GFF776	0.14	-1.4
50,370	+		GFF776	0.14	+1.5
50,370	+		GFF776	0.14	+0.3
50,370	+		GFF776	0.14	-1.0
50,370	+		GFF776	0.14	+1.5
50,371	-		GFF776	0.14	+0.1
50,371	-		GFF776	0.14	+0.6
50,371	-		GFF776	0.14	-0.2
50,437	-		GFF776	0.14	+0.5
50,807	+		GFF776	0.19	+0.3
50,941	+		GFF776	0.20	-0.7
50,941	+		GFF776	0.20	+0.1
50,942	-		GFF776	0.20	+0.4
51,100	+		GFF776	0.22	-0.5
51,101	-		GFF776	0.22	-0.3
51,366	-		GFF776	0.25	-0.6
51,423	-		GFF776	0.26	-1.7
51,614	+		GFF776	0.28	-0.4
51,614	+		GFF776	0.28	+0.7
51,615	-		GFF776	0.28	-0.1
51,752	+		GFF776	0.29	-0.8
51,752	+		GFF776	0.29	-0.5
51,752	+		GFF776	0.29	-0.8
51,752	+		GFF776	0.29	+0.0
51,753	-		GFF776	0.29	-0.4
51,756	+		GFF776	0.29	-0.5
51,756	+		GFF776	0.29	+0.2
51,757	-		GFF776	0.29	-0.4
51,757	-		GFF776	0.29	-0.5
51,780	-		GFF776	0.30	-0.4
51,792	-		GFF776	0.30	-0.7
51,878	+		GFF776	0.31	-0.4
51,946	-		GFF776	0.31	-0.5
52,004	+		GFF776	0.32	+0.3
52,088	+		GFF776	0.33	+0.2
52,494	-		GFF776	0.38	-0.1
52,523	-		GFF776	0.38	+0.5
52,665	+		GFF776	0.40	-0.9
52,771	+		GFF776	0.41	+0.8
52,772	-		GFF776	0.41	-0.2
52,925	+		GFF776	0.43	-0.2
53,030	+		GFF776	0.44	-0.0
53,211	+		GFF776	0.46	-0.5
53,212	-		GFF776	0.46	+1.5
53,212	-		GFF776	0.46	-0.4
53,212	-		GFF776	0.46	-0.6
53,307	+		GFF776	0.47	-0.9
53,307	+		GFF776	0.47	+0.0
53,308	-		GFF776	0.47	-2.0
53,363	+		GFF776	0.48	+1.1
53,364	-		GFF776	0.48	+0.3
53,442	+		GFF776	0.48	-0.1
53,442	+		GFF776	0.48	-0.1
53,443	-		GFF776	0.48	-0.5
53,443	-		GFF776	0.48	-1.6
53,443	-		GFF776	0.48	-0.1
53,469	+		GFF776	0.49	-0.2
53,469	+		GFF776	0.49	-0.3
53,472	+		GFF776	0.49	-0.5
53,473	-		GFF776	0.49	-0.5
53,688	+		GFF776	0.51	-1.2
53,689	-		GFF776	0.51	-0.7
53,691	+		GFF776	0.51	-0.2
53,691	+		GFF776	0.51	-1.3
53,691	+		GFF776	0.51	+0.5
53,692	-		GFF776	0.51	-0.1
53,692	-		GFF776	0.51	-0.7
53,692	-		GFF776	0.51	-0.7
53,692	-		GFF776	0.51	-0.2
53,692	-		GFF776	0.51	-0.5
53,692	-		GFF776	0.51	+0.0
53,730	+		GFF776	0.52	+0.1
53,730	+		GFF776	0.52	-1.2
53,825	-		GFF776	0.53	-0.5
53,834	+		GFF776	0.53	+0.1
54,039	+		GFF776	0.55	-0.3
54,072	+		GFF776	0.56	-1.3
54,157	-		GFF776	0.57	-1.4
54,157	-		GFF776	0.57	-0.2
54,157	-		GFF776	0.57	+0.5
54,157	-		GFF776	0.57	+2.7
54,159	+		GFF776	0.57	-0.1
54,160	-		GFF776	0.57	-0.8
54,160	-		GFF776	0.57	-0.8
54,160	-		GFF776	0.57	-0.5
54,160	-		GFF776	0.57	-0.4
54,222	+		GFF776	0.57	-0.3
54,222	+		GFF776	0.57	-1.5
54,223	-		GFF776	0.57	-1.5
54,223	-		GFF776	0.57	-0.4
54,223	-		GFF776	0.57	-1.2
54,285	+		GFF776	0.58	+0.9
54,317	+		GFF776	0.58	+0.5
54,417	+		GFF776	0.59	-0.5
54,417	+		GFF776	0.59	+0.6
54,417	+		GFF776	0.59	-0.8
54,418	-		GFF776	0.59	+0.8
54,418	-		GFF776	0.59	+0.2
54,418	-		GFF776	0.59	-0.1
54,688	+		GFF776	0.63	+0.1
54,688	+		GFF776	0.63	-0.9
54,688	+		GFF776	0.63	-1.7
54,689	-		GFF776	0.63	+0.3
54,689	-		GFF776	0.63	+1.1
54,689	-		GFF776	0.63	+0.3
54,689	-		GFF776	0.63	-0.1
54,786	+		GFF776	0.64	+0.4
54,966	+		GFF776	0.66	-0.9
54,966	+		GFF776	0.66	+0.5
54,967	-		GFF776	0.66	-0.1
54,967	-		GFF776	0.66	+0.3
54,984	-		GFF776	0.66	-0.5
55,118	+		GFF776	0.67	+1.2
55,119	-		GFF776	0.67	-0.9
55,172	+		GFF776	0.68	+0.3
55,273	+		GFF776	0.69	-0.1
55,374	+		GFF776	0.70	-0.4
55,375	-		GFF776	0.70	+0.2
55,461	-		GFF776	0.71	+0.1
55,577	+		GFF776	0.73	-0.5
55,600	+		GFF776	0.73	+0.9
55,640	+		GFF776	0.73	-0.2
55,641	-		GFF776	0.73	-0.1
55,803	+		GFF776	0.75	+0.2
55,804	-		GFF776	0.75	+0.3
55,928	+		GFF776	0.77	-1.0
55,948	+		GFF776	0.77	-0.7
56,003	+		GFF776	0.77	-0.4
56,004	-		GFF776	0.77	-0.2
56,063	+		GFF776	0.78	-0.7
56,063	+		GFF776	0.78	+0.5
56,063	+		GFF776	0.78	-0.8
56,064	-		GFF776	0.78	-0.5
56,064	-		GFF776	0.78	+0.8
56,108	+		GFF776	0.79	+1.2
56,108	+		GFF776	0.79	-0.5
56,108	+		GFF776	0.79	-0.1
56,109	-		GFF776	0.79	+1.2
56,109	-		GFF776	0.79	-0.2
56,109	-		GFF776	0.79	-0.0
56,121	-		GFF776	0.79	+0.0
56,237	+		GFF776	0.80	-0.7
56,237	+		GFF776	0.80	-0.1
56,237	+		GFF776	0.80	-0.6
56,238	-		GFF776	0.80	-0.6
56,238	-		GFF776	0.80	-0.7
56,238	-		GFF776	0.80	+0.3
56,238	-		GFF776	0.80	-0.1
56,379	+		GFF776	0.82	-0.2
56,379	+		GFF776	0.82	-0.8
56,379	+		GFF776	0.82	+0.4
56,380	-		GFF776	0.82	-0.8
56,380	-		GFF776	0.82	-0.8
56,380	-		GFF776	0.82	-0.5
56,380	-		GFF776	0.82	-2.8
56,380	-		GFF776	0.82	+1.5
56,380	-		GFF776	0.82	-0.6
56,431	-		GFF776	0.82	-0.3
56,436	+		GFF776	0.82	+0.0
56,437	-		GFF776	0.82	-0.3
56,437	-		GFF776	0.82	+0.5
56,437	-		GFF776	0.82	-0.7
56,437	-		GFF776	0.82	+0.0
56,437	-		GFF776	0.82	-2.1
56,437	-		GFF776	0.82	+0.1
56,567	+		GFF776	0.84	+1.8
56,567	+		GFF776	0.84	+0.5
56,568	-		GFF776	0.84	+0.2
56,657	-		GFF776	0.85	-0.6
56,657	-		GFF776	0.85	-0.6
56,657	-		GFF776	0.85	-1.8
56,657	-		GFF776	0.85	-0.5
56,695	+		GFF776	0.85	+0.1
56,695	+		GFF776	0.85	-1.6
56,695	+		GFF776	0.85	+0.5
56,696	-		GFF776	0.85	+0.5
56,738	+		GFF776	0.86	-0.4
56,739	-		GFF776	0.86	+0.3
56,739	-		GFF776	0.86	-0.3
56,776	+		GFF776	0.86	+0.0
56,776	+		GFF776	0.86	-0.6
56,777	-		GFF776	0.86	-0.2
56,777	-		GFF776	0.86	+1.1
56,871	-		GFF776	0.87	-0.3
56,871	-		GFF776	0.87	-0.3
56,900	+		GFF776	0.88	-0.1
56,900	+		GFF776	0.88	-0.5
56,901	-		GFF776	0.88	-0.4
56,933	-		GFF776	0.88	-0.1
56,933	-		GFF776	0.88	-1.2
56,933	-		GFF776	0.88	+0.2
57,053	-		GFF776	0.89	-0.2
57,108	+		GFF776	0.90	-0.6
57,108	+		GFF776	0.90	-0.9
57,109	-		GFF776	0.90	-0.0
57,150	+				-0.6
57,150	+				-2.0
57,150	+				-0.5
57,150	+				+0.2
57,150	+				-0.0
57,150	+				-0.5
57,151	-				+1.7
57,151	-				-0.3
57,168	+				-0.5
57,168	+				+1.0
57,209	+				-0.5
57,209	+				-0.5
57,209	+				+0.8
57,210	-				+0.6
57,210	-				+0.2
57,281	+				-0.0
57,281	+				+1.5
57,282	-				-1.1
57,300	-				-0.4
57,327	-				-0.1
57,362	+				-1.1
57,385	+				-0.8
57,421	+				+1.5
57,422	-				+0.9
57,441	-				+0.1
57,470	-				-0.0
57,470	-				+0.2
57,481	+				-0.6
57,481	+				-0.7
57,482	-				+0.3
57,482	-				-0.2
57,482	-				-0.4
57,482	-				-0.2
57,567	+				-0.4
57,567	+				-1.5
57,567	+				+0.5
57,567	+				-0.5
57,567	+				-1.1
57,568	-				-1.5
57,568	-				+0.5
57,568	-				+0.5
57,568	-				-0.3
57,568	-				-0.8
57,568	-				+0.6
57,568	-				-0.5
57,568	-				-1.2
57,568	-				-0.8
57,571	+				-0.4
57,571	+				-0.2
57,571	+				+0.0
57,571	+				+0.6
57,572	-				+0.3
57,611	+				-1.1
57,611	+				+0.5
57,611	+				-0.8
57,611	+				+0.2
57,612	-				-0.1
57,655	+				-2.3
57,655	+				-0.4
57,656	-				+0.5
57,660	+				+0.6
57,660	+				-0.2
57,660	+				-0.4
57,660	+				-0.1
57,660	+				+0.3
57,661	-				-0.0
57,661	-				+0.5
57,661	-				+2.1
57,866	+				-1.0
57,867	-				+0.2
57,867	-				+1.3
57,867	-				-1.2
57,927	-				-0.5
57,930	-				-1.1
57,932	+				-0.2
57,933	-				-1.3
57,933	-				-1.0
57,933	-				+0.2
57,939	-				+0.5
58,033	-				-0.8
58,471	+				-1.1
58,614	+				-0.1
58,669	+				+0.3
58,669	+				-1.0
58,670	-				-0.1
58,773	+				+0.1
58,773	+				+0.2
58,773	+				+0.6
58,774	-				-0.5
58,774	-				-0.4
58,774	-				-1.1
58,774	-				-1.0
58,774	-				-0.9
58,774	-				-1.1
58,780	+				-1.1
58,780	+				-0.2
58,781	-				-0.1
58,781	-				-0.8
58,781	-				+0.8
58,781	-				-0.5
58,858	+		GFF777	0.33	-0.8
58,859	-		GFF777	0.33	-0.7
58,859	-		GFF777	0.33	-0.1
58,859	-		GFF777	0.33	-0.2
58,885	+		GFF777	0.44	-0.1
58,885	+		GFF777	0.44	+0.2
58,885	+		GFF777	0.44	+0.0
58,886	-		GFF777	0.44	+0.1
58,886	-		GFF777	0.44	-0.1
58,886	-		GFF777	0.44	+0.9
58,894	+		GFF777	0.47	-0.1
58,894	+		GFF777	0.47	-0.5
58,894	+		GFF777	0.47	-0.2
58,894	+		GFF777	0.47	-1.5
58,894	+		GFF777	0.47	+0.0
58,895	-		GFF777	0.47	+0.5
58,895	-		GFF777	0.47	+0.1
58,895	-		GFF777	0.47	+0.3
58,895	-		GFF777	0.47	-1.1
58,969	+		GFF777	0.76	-1.1
58,969	+		GFF777	0.76	+0.1
58,969	+		GFF777	0.76	-0.3
58,969	+		GFF777	0.76	-2.0
58,970	-		GFF777	0.77	+0.1