Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF760 and GFF761 are separated by 99 nucleotides GFF761 and GFF762 are separated by 304 nucleotides GFF762 and GFF763 are separated by 5 nucleotides
GFF760 - hypothetical protein, at 23,620 to 24,579
GFF760
GFF761 - FIG00537905: hypothetical protein, at 24,679 to 26,994
GFF761
GFF762 - hypothetical protein, at 27,299 to 27,487
GFF762
GFF763 - Transporter, LysE family, at 27,493 to 28,122
GFF763
Position (kb) 24
25
26
27 Strain fitness (log2 ratio) -2
-1
0
1
2 at 24.543 kb on - strand at 25.320 kb on - strand, within GFF761 at 25.320 kb on - strand, within GFF761 at 25.406 kb on + strand, within GFF761 at 25.406 kb on + strand, within GFF761 at 25.406 kb on + strand, within GFF761 at 25.407 kb on - strand, within GFF761 at 25.505 kb on + strand, within GFF761 at 25.505 kb on + strand, within GFF761 at 25.506 kb on - strand, within GFF761 at 25.506 kb on - strand, within GFF761 at 25.567 kb on + strand, within GFF761 at 25.567 kb on + strand, within GFF761 at 25.567 kb on + strand, within GFF761 at 25.567 kb on + strand, within GFF761 at 25.637 kb on + strand, within GFF761 at 25.637 kb on + strand, within GFF761 at 25.638 kb on - strand, within GFF761 at 25.638 kb on - strand, within GFF761 at 26.090 kb on + strand, within GFF761 at 26.090 kb on + strand, within GFF761 at 26.091 kb on - strand, within GFF761 at 26.091 kb on - strand, within GFF761 at 26.091 kb on - strand, within GFF761 at 26.930 kb on + strand at 26.930 kb on + strand at 27.021 kb on + strand at 27.021 kb on + strand at 27.021 kb on + strand at 27.021 kb on + strand at 27.022 kb on - strand at 27.022 kb on - strand at 27.080 kb on + strand at 27.081 kb on + strand at 27.081 kb on + strand at 27.081 kb on + strand at 27.114 kb on + strand at 27.114 kb on + strand at 27.114 kb on + strand at 27.115 kb on - strand at 27.115 kb on - strand at 27.115 kb on - strand at 27.115 kb on - strand at 27.115 kb on - strand at 27.115 kb on - strand at 27.278 kb on + strand at 27.278 kb on + strand at 27.278 kb on + strand at 27.279 kb on - strand at 27.279 kb on - strand at 27.279 kb on - strand at 27.279 kb on - strand at 27.279 kb on - strand at 27.407 kb on + strand, within GFF762 at 27.467 kb on + strand, within GFF762 at 27.671 kb on + strand, within GFF763 at 27.671 kb on + strand, within GFF763 at 27.672 kb on - strand, within GFF763 at 27.858 kb on - strand, within GFF763 at 27.858 kb on - strand, within GFF763 at 27.858 kb on - strand, within GFF763 at 27.858 kb on - strand, within GFF763 at 27.875 kb on + strand, within GFF763 at 27.875 kb on + strand, within GFF763 at 27.875 kb on + strand, within GFF763 at 27.875 kb on + strand, within GFF763 at 27.876 kb on - strand, within GFF763
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 24,543 - +1.1 25,320 - GFF761 0.28 -0.2 25,320 - GFF761 0.28 +1.1 25,406 + GFF761 0.31 -0.1 25,406 + GFF761 0.31 +0.8 25,406 + GFF761 0.31 +0.1 25,407 - GFF761 0.31 -0.2 25,505 + GFF761 0.36 +0.2 25,505 + GFF761 0.36 +0.6 25,506 - GFF761 0.36 -0.0 25,506 - GFF761 0.36 +0.3 25,567 + GFF761 0.38 +0.9 25,567 + GFF761 0.38 -0.9 25,567 + GFF761 0.38 -1.3 25,567 + GFF761 0.38 +0.0 25,637 + GFF761 0.41 -0.3 25,637 + GFF761 0.41 +0.8 25,638 - GFF761 0.41 +0.5 25,638 - GFF761 0.41 -0.5 26,090 + GFF761 0.61 -0.3 26,090 + GFF761 0.61 -0.6 26,091 - GFF761 0.61 -1.1 26,091 - GFF761 0.61 -1.4 26,091 - GFF761 0.61 -0.1 26,930 + +0.3 26,930 + -0.8 27,021 + -0.1 27,021 + -1.2 27,021 + -0.4 27,021 + -0.2 27,022 - -0.5 27,022 - -0.8 27,080 + -0.7 27,081 + -1.1 27,081 + -1.5 27,081 + -1.7 27,114 + -0.6 27,114 + +1.0 27,114 + +0.3 27,115 - +1.3 27,115 - -0.6 27,115 - -0.0 27,115 - +0.2 27,115 - +0.4 27,115 - +0.4 27,278 + +0.8 27,278 + -0.3 27,278 + +2.0 27,279 - -1.8 27,279 - -0.1 27,279 - -0.7 27,279 - +1.1 27,279 - -0.1 27,407 + GFF762 0.57 -0.2 27,467 + GFF762 0.89 -0.2 27,671 + GFF763 0.28 -0.2 27,671 + GFF763 0.28 -0.5 27,672 - GFF763 0.28 +0.5 27,858 - GFF763 0.58 -0.6 27,858 - GFF763 0.58 -0.1 27,858 - GFF763 0.58 -0.1 27,858 - GFF763 0.58 -0.6 27,875 + GFF763 0.61 -0.4 27,875 + GFF763 0.61 -0.2 27,875 + GFF763 0.61 -1.1 27,875 + GFF763 0.61 +0.7 27,876 - GFF763 0.61 -0.4
Or see this region's nucleotide sequence