Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1667 and GFF1668 are separated by 3 nucleotides GFF1668 and GFF1669 are separated by 31 nucleotides
GFF1667 - N-methylhydantoinase B (EC 3.5.2.14), at 312,046 to 313,728
GFF1667
GFF1668 - BUG/TctC family periplasmic protein, at 313,732 to 314,700
GFF1668
GFF1669 - hypothetical protein, at 314,732 to 316,075
GFF1669
Position (kb) 313
314
315 Strain fitness (log2 ratio) -2
-1
0
1 at 312.839 kb on + strand, within GFF1667 at 312.839 kb on + strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 312.840 kb on - strand, within GFF1667 at 313.007 kb on + strand, within GFF1667 at 313.103 kb on + strand, within GFF1667 at 313.307 kb on + strand, within GFF1667 at 313.307 kb on + strand, within GFF1667 at 313.308 kb on - strand, within GFF1667 at 313.308 kb on - strand, within GFF1667 at 313.361 kb on + strand, within GFF1667 at 313.361 kb on + strand, within GFF1667 at 313.367 kb on + strand, within GFF1667 at 313.367 kb on + strand, within GFF1667 at 313.367 kb on + strand, within GFF1667 at 313.433 kb on + strand, within GFF1667 at 313.976 kb on + strand, within GFF1668 at 313.977 kb on - strand, within GFF1668 at 314.391 kb on - strand, within GFF1668 at 314.854 kb on - strand at 314.854 kb on - strand at 314.854 kb on - strand at 315.168 kb on + strand, within GFF1669 at 315.186 kb on + strand, within GFF1669 at 315.186 kb on + strand, within GFF1669 at 315.267 kb on + strand, within GFF1669 at 315.268 kb on - strand, within GFF1669 at 315.375 kb on + strand, within GFF1669 at 315.376 kb on - strand, within GFF1669 at 315.462 kb on + strand, within GFF1669 at 315.462 kb on + strand, within GFF1669 at 315.463 kb on - strand, within GFF1669 at 315.463 kb on - strand, within GFF1669 at 315.501 kb on + strand, within GFF1669 at 315.502 kb on - strand, within GFF1669
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 312,839 + GFF1667 0.47 -1.4 312,839 + GFF1667 0.47 -0.1 312,840 - GFF1667 0.47 +0.1 312,840 - GFF1667 0.47 +0.2 312,840 - GFF1667 0.47 -1.1 312,840 - GFF1667 0.47 -0.6 312,840 - GFF1667 0.47 -1.8 313,007 + GFF1667 0.57 +1.2 313,103 + GFF1667 0.63 +0.1 313,307 + GFF1667 0.75 -0.3 313,307 + GFF1667 0.75 -0.2 313,308 - GFF1667 0.75 -0.3 313,308 - GFF1667 0.75 +0.1 313,361 + GFF1667 0.78 +0.3 313,361 + GFF1667 0.78 +0.1 313,367 + GFF1667 0.78 -2.6 313,367 + GFF1667 0.78 +0.1 313,367 + GFF1667 0.78 +0.0 313,433 + GFF1667 0.82 -0.1 313,976 + GFF1668 0.25 +0.3 313,977 - GFF1668 0.25 +1.0 314,391 - GFF1668 0.68 +0.4 314,854 - -1.5 314,854 - -0.0 314,854 - -0.9 315,168 + GFF1669 0.32 +0.1 315,186 + GFF1669 0.34 +0.1 315,186 + GFF1669 0.34 -0.4 315,267 + GFF1669 0.40 -1.1 315,268 - GFF1669 0.40 -0.5 315,375 + GFF1669 0.48 +0.7 315,376 - GFF1669 0.48 -0.5 315,462 + GFF1669 0.54 -0.5 315,462 + GFF1669 0.54 +0.2 315,463 - GFF1669 0.54 +1.3 315,463 - GFF1669 0.54 +0.3 315,501 + GFF1669 0.57 +0.1 315,502 - GFF1669 0.57 +0.3
Or see this region's nucleotide sequence