Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6744 and GFF6745 are separated by 177 nucleotides GFF6745 and GFF6746 overlap by 8 nucleotides
GFF6744 - hypothetical protein, at 57,694 to 58,497
GFF6744
GFF6745 - hypothetical protein, at 58,675 to 59,538
GFF6745
GFF6746 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein, at 59,531 to 61,147
GFF6746
Position (kb) 58
59
60 Strain fitness (log2 ratio) -2
-1
0
1
2 at 57.852 kb on - strand, within GFF6744 at 57.852 kb on - strand, within GFF6744 at 57.899 kb on + strand, within GFF6744 at 57.947 kb on + strand, within GFF6744 at 57.947 kb on + strand, within GFF6744 at 58.538 kb on + strand at 58.556 kb on + strand at 58.557 kb on - strand at 58.676 kb on + strand at 58.676 kb on + strand at 58.676 kb on + strand at 58.684 kb on + strand at 58.684 kb on + strand at 58.685 kb on - strand at 58.685 kb on - strand at 58.899 kb on - strand, within GFF6745 at 58.925 kb on + strand, within GFF6745 at 58.926 kb on - strand, within GFF6745 at 58.926 kb on - strand, within GFF6745 at 58.926 kb on - strand, within GFF6745 at 59.057 kb on + strand, within GFF6745 at 59.159 kb on + strand, within GFF6745 at 59.160 kb on - strand, within GFF6745 at 59.220 kb on - strand, within GFF6745 at 59.220 kb on - strand, within GFF6745 at 59.249 kb on + strand, within GFF6745 at 59.250 kb on - strand, within GFF6745 at 59.250 kb on - strand, within GFF6745 at 59.771 kb on + strand, within GFF6746 at 59.771 kb on + strand, within GFF6746 at 59.771 kb on + strand, within GFF6746 at 59.771 kb on + strand, within GFF6746 at 59.772 kb on - strand, within GFF6746 at 59.832 kb on + strand, within GFF6746 at 59.832 kb on + strand, within GFF6746 at 59.833 kb on - strand, within GFF6746 at 59.833 kb on - strand, within GFF6746 at 59.919 kb on + strand, within GFF6746 at 59.935 kb on - strand, within GFF6746 at 59.937 kb on + strand, within GFF6746 at 59.938 kb on - strand, within GFF6746 at 59.938 kb on - strand, within GFF6746 at 59.938 kb on - strand, within GFF6746 at 59.938 kb on - strand, within GFF6746 at 59.938 kb on - strand, within GFF6746 at 59.940 kb on + strand, within GFF6746 at 59.940 kb on + strand, within GFF6746 at 59.940 kb on + strand, within GFF6746 at 59.940 kb on + strand, within GFF6746 at 59.940 kb on + strand, within GFF6746 at 59.941 kb on - strand, within GFF6746 at 59.941 kb on - strand, within GFF6746 at 59.941 kb on - strand, within GFF6746 at 59.941 kb on - strand, within GFF6746 at 59.941 kb on - strand, within GFF6746 at 59.941 kb on - strand, within GFF6746 at 60.024 kb on + strand, within GFF6746 at 60.342 kb on - strand, within GFF6746 at 60.342 kb on - strand, within GFF6746 at 60.342 kb on - strand, within GFF6746 at 60.345 kb on + strand, within GFF6746 at 60.345 kb on + strand, within GFF6746 at 60.346 kb on - strand, within GFF6746 at 60.346 kb on - strand, within GFF6746 at 60.417 kb on + strand, within GFF6746 at 60.417 kb on + strand, within GFF6746 at 60.418 kb on - strand, within GFF6746 at 60.418 kb on - strand, within GFF6746 at 60.418 kb on - strand, within GFF6746 at 60.436 kb on - strand, within GFF6746
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 57,852 - GFF6744 0.20 +0.8 57,852 - GFF6744 0.20 -0.5 57,899 + GFF6744 0.25 -1.4 57,947 + GFF6744 0.31 -0.7 57,947 + GFF6744 0.31 -0.1 58,538 + +1.2 58,556 + +0.0 58,557 - -0.4 58,676 + -0.7 58,676 + +0.3 58,676 + +0.3 58,684 + -0.0 58,684 + +0.3 58,685 - -1.7 58,685 - -0.1 58,899 - GFF6745 0.26 -0.2 58,925 + GFF6745 0.29 -1.9 58,926 - GFF6745 0.29 +0.5 58,926 - GFF6745 0.29 -1.3 58,926 - GFF6745 0.29 +1.5 59,057 + GFF6745 0.44 +0.7 59,159 + GFF6745 0.56 -0.8 59,160 - GFF6745 0.56 -0.4 59,220 - GFF6745 0.63 -0.2 59,220 - GFF6745 0.63 +1.2 59,249 + GFF6745 0.66 -0.1 59,250 - GFF6745 0.67 +0.4 59,250 - GFF6745 0.67 -0.0 59,771 + GFF6746 0.15 +0.5 59,771 + GFF6746 0.15 +0.6 59,771 + GFF6746 0.15 +2.0 59,771 + GFF6746 0.15 -0.3 59,772 - GFF6746 0.15 +0.7 59,832 + GFF6746 0.19 +0.0 59,832 + GFF6746 0.19 +0.2 59,833 - GFF6746 0.19 +0.8 59,833 - GFF6746 0.19 -0.4 59,919 + GFF6746 0.24 +0.1 59,935 - GFF6746 0.25 -0.3 59,937 + GFF6746 0.25 +0.7 59,938 - GFF6746 0.25 -1.4 59,938 - GFF6746 0.25 -0.0 59,938 - GFF6746 0.25 -0.3 59,938 - GFF6746 0.25 -0.1 59,938 - GFF6746 0.25 +0.4 59,940 + GFF6746 0.25 +1.6 59,940 + GFF6746 0.25 -1.8 59,940 + GFF6746 0.25 -0.2 59,940 + GFF6746 0.25 +0.4 59,940 + GFF6746 0.25 -0.1 59,941 - GFF6746 0.25 +0.5 59,941 - GFF6746 0.25 +0.5 59,941 - GFF6746 0.25 +0.1 59,941 - GFF6746 0.25 +0.1 59,941 - GFF6746 0.25 +2.0 59,941 - GFF6746 0.25 +0.8 60,024 + GFF6746 0.30 -0.3 60,342 - GFF6746 0.50 -1.1 60,342 - GFF6746 0.50 -0.3 60,342 - GFF6746 0.50 -0.8 60,345 + GFF6746 0.50 -0.0 60,345 + GFF6746 0.50 -0.4 60,346 - GFF6746 0.50 -0.7 60,346 - GFF6746 0.50 -0.8 60,417 + GFF6746 0.55 +0.2 60,417 + GFF6746 0.55 -0.8 60,418 - GFF6746 0.55 -0.7 60,418 - GFF6746 0.55 +0.2 60,418 - GFF6746 0.55 +0.4 60,436 - GFF6746 0.56 +0.0
Or see this region's nucleotide sequence