Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6725 and GFF6726 overlap by 4 nucleotides GFF6726 and GFF6727 overlap by 1 nucleotides GFF6727 and GFF6728 are separated by 18 nucleotides
GFF6725 - Tellurite resistance protein, at 35,058 to 36,308
GFF6725
GFF6726 - hypothetical protein, at 36,305 to 37,909
GFF6726
GFF6727 - no description, at 37,909 to 38,538
GFF6727
GFF6728 - Probable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-), at 38,557 to 40,008
GFF6728
Position (kb) 36
37
38 Strain fitness (log2 ratio) -1
0
1
2 at 35.685 kb on + strand, within GFF6725 at 35.685 kb on + strand, within GFF6725 at 35.686 kb on - strand, within GFF6725 at 35.686 kb on - strand, within GFF6725 at 35.793 kb on + strand, within GFF6725 at 36.133 kb on + strand, within GFF6725 at 36.136 kb on - strand, within GFF6725 at 36.136 kb on - strand, within GFF6725 at 36.237 kb on + strand at 36.238 kb on - strand at 36.238 kb on - strand at 36.768 kb on - strand, within GFF6726 at 36.986 kb on + strand, within GFF6726 at 36.986 kb on + strand, within GFF6726 at 36.987 kb on - strand, within GFF6726 at 37.118 kb on + strand, within GFF6726 at 37.119 kb on - strand, within GFF6726 at 37.284 kb on + strand, within GFF6726 at 37.295 kb on + strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.452 kb on - strand, within GFF6726 at 37.524 kb on + strand, within GFF6726 at 37.613 kb on + strand, within GFF6726 at 37.614 kb on - strand, within GFF6726 at 37.614 kb on - strand, within GFF6726 at 37.614 kb on - strand, within GFF6726 at 38.056 kb on + strand, within GFF6727 at 38.057 kb on - strand, within GFF6727 at 38.057 kb on - strand, within GFF6727 at 38.305 kb on + strand, within GFF6727 at 38.330 kb on - strand, within GFF6727 at 38.330 kb on - strand, within GFF6727 at 38.330 kb on - strand, within GFF6727 at 38.883 kb on - strand, within GFF6728
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 35,685 + GFF6725 0.50 -1.0 35,685 + GFF6725 0.50 +0.0 35,686 - GFF6725 0.50 -0.0 35,686 - GFF6725 0.50 +0.5 35,793 + GFF6725 0.59 +0.4 36,133 + GFF6725 0.86 -0.5 36,136 - GFF6725 0.86 -1.0 36,136 - GFF6725 0.86 -0.2 36,237 + +0.2 36,238 - +0.2 36,238 - +2.5 36,768 - GFF6726 0.29 -0.7 36,986 + GFF6726 0.42 +0.2 36,986 + GFF6726 0.42 -0.2 36,987 - GFF6726 0.42 -0.4 37,118 + GFF6726 0.51 +0.5 37,119 - GFF6726 0.51 +0.8 37,284 + GFF6726 0.61 +0.7 37,295 + GFF6726 0.62 -1.0 37,296 - GFF6726 0.62 -0.3 37,296 - GFF6726 0.62 +0.6 37,296 - GFF6726 0.62 -0.8 37,452 - GFF6726 0.71 -0.4 37,524 + GFF6726 0.76 -0.5 37,613 + GFF6726 0.81 +2.6 37,614 - GFF6726 0.82 +1.5 37,614 - GFF6726 0.82 +1.0 37,614 - GFF6726 0.82 -0.5 38,056 + GFF6727 0.23 +0.0 38,057 - GFF6727 0.23 +0.5 38,057 - GFF6727 0.23 -0.4 38,305 + GFF6727 0.63 -0.3 38,330 - GFF6727 0.67 -0.1 38,330 - GFF6727 0.67 +0.2 38,330 - GFF6727 0.67 +0.2 38,883 - GFF6728 0.22 -0.5
Or see this region's nucleotide sequence