Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5451 and GFF5452 are separated by 72 nucleotides GFF5452 and GFF5453 are separated by 27 nucleotides
GFF5451 - Membrane-bound lytic murein transglycosylase A, at 80,274 to 81,392
GFF5451
GFF5452 - no description, at 81,465 to 81,590
GFF5452
GFF5453 - Alkaline phosphatase (EC 3.1.3.1), at 81,618 to 83,612
GFF5453
Position (kb) 81
82 Strain fitness (log2 ratio) -2
-1
0
1
2 at 80.595 kb on + strand, within GFF5451 at 80.643 kb on + strand, within GFF5451 at 80.643 kb on + strand, within GFF5451 at 80.643 kb on + strand, within GFF5451 at 80.643 kb on + strand, within GFF5451 at 80.643 kb on + strand, within GFF5451 at 80.643 kb on + strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.644 kb on - strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.646 kb on + strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.647 kb on - strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.658 kb on + strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.659 kb on - strand, within GFF5451 at 80.703 kb on + strand, within GFF5451 at 80.703 kb on + strand, within GFF5451 at 80.703 kb on + strand, within GFF5451 at 80.704 kb on - strand, within GFF5451 at 80.704 kb on - strand, within GFF5451 at 80.704 kb on - strand, within GFF5451 at 80.704 kb on - strand, within GFF5451 at 80.704 kb on - strand, within GFF5451 at 80.704 kb on - strand, within GFF5451 at 80.742 kb on + strand, within GFF5451 at 80.742 kb on + strand, within GFF5451 at 80.742 kb on + strand, within GFF5451 at 80.743 kb on - strand, within GFF5451 at 80.887 kb on - strand, within GFF5451 at 80.934 kb on + strand, within GFF5451 at 80.935 kb on - strand, within GFF5451 at 81.063 kb on + strand, within GFF5451 at 81.063 kb on + strand, within GFF5451 at 81.063 kb on + strand, within GFF5451 at 81.063 kb on + strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.064 kb on - strand, within GFF5451 at 81.156 kb on - strand, within GFF5451 at 81.183 kb on + strand, within GFF5451 at 81.291 kb on + strand at 81.291 kb on + strand at 81.291 kb on + strand at 81.291 kb on + strand at 81.292 kb on - strand at 81.292 kb on - strand at 81.292 kb on - strand at 81.292 kb on - strand at 81.292 kb on - strand at 81.292 kb on - strand at 81.468 kb on + strand at 81.468 kb on + strand at 81.468 kb on + strand at 81.468 kb on + strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.469 kb on - strand at 81.479 kb on + strand, within GFF5452 at 81.479 kb on + strand, within GFF5452 at 81.479 kb on + strand, within GFF5452 at 81.479 kb on + strand, within GFF5452 at 81.480 kb on - strand, within GFF5452 at 81.480 kb on - strand, within GFF5452 at 81.480 kb on - strand, within GFF5452 at 81.480 kb on - strand, within GFF5452 at 81.480 kb on - strand, within GFF5452 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.855 kb on + strand, within GFF5453 at 81.856 kb on - strand, within GFF5453 at 81.856 kb on - strand, within GFF5453 at 81.856 kb on - strand, within GFF5453 at 81.867 kb on + strand, within GFF5453 at 81.867 kb on + strand, within GFF5453 at 81.867 kb on + strand, within GFF5453 at 81.868 kb on - strand, within GFF5453 at 81.868 kb on - strand, within GFF5453 at 81.868 kb on - strand, within GFF5453 at 81.868 kb on - strand, within GFF5453 at 81.936 kb on + strand, within GFF5453 at 81.936 kb on + strand, within GFF5453 at 81.936 kb on + strand, within GFF5453 at 81.937 kb on - strand, within GFF5453 at 81.937 kb on - strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.939 kb on + strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 81.940 kb on - strand, within GFF5453 at 82.098 kb on + strand, within GFF5453 at 82.098 kb on + strand, within GFF5453 at 82.098 kb on + strand, within GFF5453 at 82.099 kb on - strand, within GFF5453 at 82.099 kb on - strand, within GFF5453 at 82.099 kb on - strand, within GFF5453 at 82.099 kb on - strand, within GFF5453 at 82.131 kb on + strand, within GFF5453 at 82.131 kb on + strand, within GFF5453 at 82.131 kb on + strand, within GFF5453 at 82.131 kb on + strand, within GFF5453 at 82.132 kb on - strand, within GFF5453 at 82.132 kb on - strand, within GFF5453 at 82.132 kb on - strand, within GFF5453 at 82.132 kb on - strand, within GFF5453 at 82.132 kb on - strand, within GFF5453 at 82.132 kb on - strand, within GFF5453 at 82.209 kb on + strand, within GFF5453 at 82.209 kb on + strand, within GFF5453 at 82.209 kb on + strand, within GFF5453 at 82.209 kb on + strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.210 kb on - strand, within GFF5453 at 82.302 kb on + strand, within GFF5453 at 82.303 kb on - strand, within GFF5453 at 82.303 kb on - strand, within GFF5453 at 82.350 kb on + strand, within GFF5453 at 82.350 kb on + strand, within GFF5453 at 82.350 kb on + strand, within GFF5453 at 82.350 kb on + strand, within GFF5453 at 82.350 kb on + strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.351 kb on - strand, within GFF5453 at 82.352 kb on + strand, within GFF5453 at 82.352 kb on + strand, within GFF5453 at 82.352 kb on + strand, within GFF5453 at 82.352 kb on + strand, within GFF5453 at 82.353 kb on - strand, within GFF5453 at 82.353 kb on - strand, within GFF5453 at 82.353 kb on - strand, within GFF5453 at 82.353 kb on - strand, within GFF5453 at 82.353 kb on - strand, within GFF5453 at 82.353 kb on - strand, within GFF5453 at 82.398 kb on + strand, within GFF5453 at 82.398 kb on + strand, within GFF5453 at 82.398 kb on + strand, within GFF5453 at 82.398 kb on + strand, within GFF5453 at 82.399 kb on - strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.458 kb on + strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.459 kb on - strand, within GFF5453 at 82.533 kb on + strand, within GFF5453 at 82.533 kb on + strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453 at 82.534 kb on - strand, within GFF5453
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 80,595 + GFF5451 0.29 -0.7 80,643 + GFF5451 0.33 +0.0 80,643 + GFF5451 0.33 +0.4 80,643 + GFF5451 0.33 -1.0 80,643 + GFF5451 0.33 +0.0 80,643 + GFF5451 0.33 -0.6 80,643 + GFF5451 0.33 -0.4 80,644 - GFF5451 0.33 -0.8 80,644 - GFF5451 0.33 -2.0 80,644 - GFF5451 0.33 -0.7 80,644 - GFF5451 0.33 -0.1 80,644 - GFF5451 0.33 -0.3 80,644 - GFF5451 0.33 +0.3 80,644 - GFF5451 0.33 -0.8 80,646 + GFF5451 0.33 +0.9 80,646 + GFF5451 0.33 -0.4 80,646 + GFF5451 0.33 -1.4 80,646 + GFF5451 0.33 -1.1 80,646 + GFF5451 0.33 +1.2 80,646 + GFF5451 0.33 +1.6 80,646 + GFF5451 0.33 +1.2 80,647 - GFF5451 0.33 -0.4 80,647 - GFF5451 0.33 -1.6 80,647 - GFF5451 0.33 -0.5 80,647 - GFF5451 0.33 -0.1 80,647 - GFF5451 0.33 -0.4 80,647 - GFF5451 0.33 -0.4 80,647 - GFF5451 0.33 +0.3 80,647 - GFF5451 0.33 +0.9 80,658 + GFF5451 0.34 -1.2 80,658 + GFF5451 0.34 -0.2 80,658 + GFF5451 0.34 -0.7 80,658 + GFF5451 0.34 -0.0 80,658 + GFF5451 0.34 -0.5 80,658 + GFF5451 0.34 -2.2 80,658 + GFF5451 0.34 -0.9 80,658 + GFF5451 0.34 +1.7 80,659 - GFF5451 0.34 -1.0 80,659 - GFF5451 0.34 +0.4 80,659 - GFF5451 0.34 -0.3 80,659 - GFF5451 0.34 +0.2 80,659 - GFF5451 0.34 -0.3 80,659 - GFF5451 0.34 -0.2 80,659 - GFF5451 0.34 -0.2 80,703 + GFF5451 0.38 +1.6 80,703 + GFF5451 0.38 -1.9 80,703 + GFF5451 0.38 +0.7 80,704 - GFF5451 0.38 -0.2 80,704 - GFF5451 0.38 +0.6 80,704 - GFF5451 0.38 -0.4 80,704 - GFF5451 0.38 -1.1 80,704 - GFF5451 0.38 -0.6 80,704 - GFF5451 0.38 +0.4 80,742 + GFF5451 0.42 -0.0 80,742 + GFF5451 0.42 -1.5 80,742 + GFF5451 0.42 -0.1 80,743 - GFF5451 0.42 -1.7 80,887 - GFF5451 0.55 +0.8 80,934 + GFF5451 0.59 +0.2 80,935 - GFF5451 0.59 -0.9 81,063 + GFF5451 0.71 -1.0 81,063 + GFF5451 0.71 -2.1 81,063 + GFF5451 0.71 +0.0 81,063 + GFF5451 0.71 -0.8 81,064 - GFF5451 0.71 +0.2 81,064 - GFF5451 0.71 -0.6 81,064 - GFF5451 0.71 -1.5 81,064 - GFF5451 0.71 -0.4 81,064 - GFF5451 0.71 -1.4 81,064 - GFF5451 0.71 +1.0 81,064 - GFF5451 0.71 +0.2 81,064 - GFF5451 0.71 -1.0 81,064 - GFF5451 0.71 +0.4 81,064 - GFF5451 0.71 +0.6 81,156 - GFF5451 0.79 -0.1 81,183 + GFF5451 0.81 +2.2 81,291 + -0.0 81,291 + +0.2 81,291 + +1.2 81,291 + -1.6 81,292 - -0.9 81,292 - -0.4 81,292 - +0.0 81,292 - +0.0 81,292 - -0.4 81,292 - -0.6 81,468 + +0.9 81,468 + -0.6 81,468 + -0.3 81,468 + +0.4 81,469 - -0.2 81,469 - -0.6 81,469 - -2.1 81,469 - -0.2 81,469 - +1.9 81,469 - +1.6 81,469 - +0.3 81,469 - -0.4 81,469 - +0.3 81,469 - +0.2 81,469 - -0.1 81,479 + GFF5452 0.11 -0.6 81,479 + GFF5452 0.11 -0.3 81,479 + GFF5452 0.11 -0.5 81,479 + GFF5452 0.11 -0.8 81,480 - GFF5452 0.12 -1.1 81,480 - GFF5452 0.12 -1.1 81,480 - GFF5452 0.12 -0.7 81,480 - GFF5452 0.12 -0.1 81,480 - GFF5452 0.12 -0.7 81,855 + GFF5453 0.12 +0.2 81,855 + GFF5453 0.12 -0.4 81,855 + GFF5453 0.12 -0.8 81,855 + GFF5453 0.12 +0.9 81,855 + GFF5453 0.12 +0.3 81,855 + GFF5453 0.12 +1.2 81,855 + GFF5453 0.12 +0.1 81,855 + GFF5453 0.12 +1.0 81,855 + GFF5453 0.12 -1.1 81,856 - GFF5453 0.12 -1.3 81,856 - GFF5453 0.12 -0.4 81,856 - GFF5453 0.12 +0.1 81,867 + GFF5453 0.12 +0.0 81,867 + GFF5453 0.12 -0.4 81,867 + GFF5453 0.12 -0.3 81,868 - GFF5453 0.13 -1.0 81,868 - GFF5453 0.13 -0.1 81,868 - GFF5453 0.13 -0.8 81,868 - GFF5453 0.13 +1.2 81,936 + GFF5453 0.16 -0.4 81,936 + GFF5453 0.16 -0.1 81,936 + GFF5453 0.16 +1.2 81,937 - GFF5453 0.16 +0.0 81,937 - GFF5453 0.16 -1.0 81,939 + GFF5453 0.16 -0.0 81,939 + GFF5453 0.16 +1.4 81,939 + GFF5453 0.16 +0.9 81,939 + GFF5453 0.16 -1.4 81,939 + GFF5453 0.16 -0.8 81,939 + GFF5453 0.16 +0.5 81,939 + GFF5453 0.16 +0.6 81,940 - GFF5453 0.16 -1.0 81,940 - GFF5453 0.16 -1.0 81,940 - GFF5453 0.16 +0.2 81,940 - GFF5453 0.16 +0.1 81,940 - GFF5453 0.16 +0.8 81,940 - GFF5453 0.16 -1.4 81,940 - GFF5453 0.16 -0.0 81,940 - GFF5453 0.16 +0.1 81,940 - GFF5453 0.16 +1.0 81,940 - GFF5453 0.16 +0.6 81,940 - GFF5453 0.16 -0.9 82,098 + GFF5453 0.24 +0.0 82,098 + GFF5453 0.24 -0.1 82,098 + GFF5453 0.24 +0.1 82,099 - GFF5453 0.24 +0.1 82,099 - GFF5453 0.24 +0.0 82,099 - GFF5453 0.24 -0.7 82,099 - GFF5453 0.24 +1.8 82,131 + GFF5453 0.26 +1.2 82,131 + GFF5453 0.26 -0.1 82,131 + GFF5453 0.26 -0.1 82,131 + GFF5453 0.26 -0.9 82,132 - GFF5453 0.26 -0.0 82,132 - GFF5453 0.26 +0.2 82,132 - GFF5453 0.26 -0.6 82,132 - GFF5453 0.26 -0.4 82,132 - GFF5453 0.26 +0.3 82,132 - GFF5453 0.26 -0.1 82,209 + GFF5453 0.30 +0.2 82,209 + GFF5453 0.30 -0.3 82,209 + GFF5453 0.30 -0.1 82,209 + GFF5453 0.30 -0.4 82,210 - GFF5453 0.30 +1.4 82,210 - GFF5453 0.30 -0.3 82,210 - GFF5453 0.30 -0.5 82,210 - GFF5453 0.30 +0.9 82,210 - GFF5453 0.30 +0.1 82,210 - GFF5453 0.30 +0.3 82,210 - GFF5453 0.30 -0.5 82,210 - GFF5453 0.30 -0.2 82,210 - GFF5453 0.30 -0.8 82,210 - GFF5453 0.30 -0.4 82,210 - GFF5453 0.30 -0.8 82,302 + GFF5453 0.34 -0.3 82,303 - GFF5453 0.34 -0.8 82,303 - GFF5453 0.34 +0.8 82,350 + GFF5453 0.37 +0.9 82,350 + GFF5453 0.37 +1.3 82,350 + GFF5453 0.37 -1.6 82,350 + GFF5453 0.37 -0.9 82,350 + GFF5453 0.37 -0.1 82,351 - GFF5453 0.37 +0.5 82,351 - GFF5453 0.37 -0.4 82,351 - GFF5453 0.37 -1.2 82,351 - GFF5453 0.37 +0.6 82,351 - GFF5453 0.37 -0.3 82,351 - GFF5453 0.37 +0.3 82,351 - GFF5453 0.37 -0.7 82,351 - GFF5453 0.37 -0.0 82,352 + GFF5453 0.37 -0.3 82,352 + GFF5453 0.37 +0.2 82,352 + GFF5453 0.37 +0.2 82,352 + GFF5453 0.37 +0.1 82,353 - GFF5453 0.37 +0.1 82,353 - GFF5453 0.37 -0.2 82,353 - GFF5453 0.37 -0.2 82,353 - GFF5453 0.37 -0.7 82,353 - GFF5453 0.37 +0.0 82,353 - GFF5453 0.37 +0.3 82,398 + GFF5453 0.39 +0.9 82,398 + GFF5453 0.39 -0.6 82,398 + GFF5453 0.39 +0.2 82,398 + GFF5453 0.39 -0.3 82,399 - GFF5453 0.39 +0.3 82,458 + GFF5453 0.42 +1.1 82,458 + GFF5453 0.42 +0.9 82,458 + GFF5453 0.42 -0.9 82,458 + GFF5453 0.42 +1.2 82,458 + GFF5453 0.42 +1.9 82,458 + GFF5453 0.42 +0.2 82,458 + GFF5453 0.42 -0.3 82,458 + GFF5453 0.42 +0.8 82,459 - GFF5453 0.42 +2.2 82,459 - GFF5453 0.42 -0.3 82,459 - GFF5453 0.42 +0.3 82,459 - GFF5453 0.42 -0.3 82,459 - GFF5453 0.42 +0.8 82,459 - GFF5453 0.42 +0.2 82,459 - GFF5453 0.42 -1.3 82,533 + GFF5453 0.46 -0.2 82,533 + GFF5453 0.46 +0.6 82,534 - GFF5453 0.46 +0.4 82,534 - GFF5453 0.46 -0.7 82,534 - GFF5453 0.46 +1.4 82,534 - GFF5453 0.46 -0.3 82,534 - GFF5453 0.46 -0.9 82,534 - GFF5453 0.46 +2.2 82,534 - GFF5453 0.46 +0.0 82,534 - GFF5453 0.46 +0.7
Or see this region's nucleotide sequence