Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5440 and GFF5441 are separated by 87 nucleotides GFF5441 and GFF5442 are separated by 3 nucleotides GFF5442 and GFF5443 are separated by 16 nucleotides
GFF5440 - RNA polymerase ECF-type sigma factor, at 65,327 to 66,217
GFF5440
GFF5441 - 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein, at 66,305 to 66,766
GFF5441
GFF5442 - Septum-associated rare lipoprotein A, at 66,770 to 67,954
GFF5442
GFF5443 - Glutamine synthetase adenylyl-L-tyrosine phosphorylase (EC 2.7.7.89) / Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42), at 67,971 to 70,721
GFF5443
Position (kb) 66
67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 66.054 kb on - strand, within GFF5440 at 66.061 kb on + strand, within GFF5440 at 66.064 kb on + strand, within GFF5440 at 66.215 kb on + strand at 66.216 kb on - strand at 66.216 kb on - strand at 66.265 kb on + strand at 66.266 kb on - strand at 66.266 kb on - strand at 66.458 kb on + strand, within GFF5441 at 66.459 kb on - strand, within GFF5441 at 66.459 kb on - strand, within GFF5441 at 66.459 kb on - strand, within GFF5441 at 66.459 kb on - strand, within GFF5441 at 66.551 kb on + strand, within GFF5441 at 66.551 kb on + strand, within GFF5441 at 66.551 kb on + strand, within GFF5441 at 66.551 kb on + strand, within GFF5441 at 66.551 kb on + strand, within GFF5441 at 66.552 kb on - strand, within GFF5441 at 66.552 kb on - strand, within GFF5441 at 66.552 kb on - strand, within GFF5441 at 66.552 kb on - strand, within GFF5441 at 66.552 kb on - strand, within GFF5441 at 66.552 kb on - strand, within GFF5441 at 67.214 kb on + strand, within GFF5442 at 67.214 kb on + strand, within GFF5442 at 67.215 kb on - strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.224 kb on + strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.225 kb on - strand, within GFF5442 at 67.371 kb on + strand, within GFF5442 at 67.371 kb on + strand, within GFF5442 at 67.371 kb on + strand, within GFF5442 at 67.372 kb on - strand, within GFF5442 at 67.372 kb on - strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.485 kb on + strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.486 kb on - strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.581 kb on + strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.582 kb on - strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.623 kb on + strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.624 kb on - strand, within GFF5442 at 67.632 kb on + strand, within GFF5442 at 67.632 kb on + strand, within GFF5442 at 67.632 kb on + strand, within GFF5442 at 67.632 kb on + strand, within GFF5442 at 67.632 kb on + strand, within GFF5442 at 67.632 kb on + strand, within GFF5442 at 67.633 kb on - strand, within GFF5442 at 67.633 kb on - strand, within GFF5442 at 67.677 kb on + strand, within GFF5442 at 67.677 kb on + strand, within GFF5442 at 67.732 kb on - strand, within GFF5442 at 67.732 kb on - strand, within GFF5442 at 67.752 kb on + strand, within GFF5442 at 67.752 kb on + strand, within GFF5442 at 67.752 kb on + strand, within GFF5442 at 67.752 kb on + strand, within GFF5442 at 67.752 kb on + strand, within GFF5442 at 67.753 kb on - strand, within GFF5442 at 67.753 kb on - strand, within GFF5442 at 67.753 kb on - strand, within GFF5442 at 67.980 kb on + strand at 67.980 kb on + strand at 67.981 kb on - strand at 67.981 kb on - strand at 68.506 kb on + strand, within GFF5443 at 68.506 kb on + strand, within GFF5443 at 68.506 kb on + strand, within GFF5443 at 68.507 kb on - strand, within GFF5443 at 68.507 kb on - strand, within GFF5443 at 68.507 kb on - strand, within GFF5443 at 68.507 kb on - strand, within GFF5443 at 68.515 kb on + strand, within GFF5443 at 68.516 kb on - strand, within GFF5443 at 68.516 kb on - strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.635 kb on + strand, within GFF5443 at 68.636 kb on - strand, within GFF5443 at 68.636 kb on - strand, within GFF5443 at 68.636 kb on - strand, within GFF5443 at 68.636 kb on - strand, within GFF5443 at 68.636 kb on - strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.644 kb on + strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.645 kb on - strand, within GFF5443 at 68.677 kb on + strand, within GFF5443 at 68.678 kb on - strand, within GFF5443 at 68.708 kb on - strand, within GFF5443 at 68.737 kb on + strand, within GFF5443 at 68.738 kb on - strand, within GFF5443
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 66,054 - GFF5440 0.82 -0.8 66,061 + GFF5440 0.82 -0.8 66,064 + GFF5440 0.83 -1.1 66,215 + -0.0 66,216 - -0.1 66,216 - -0.9 66,265 + +0.4 66,266 - +0.1 66,266 - +0.5 66,458 + GFF5441 0.33 -0.2 66,459 - GFF5441 0.33 +0.1 66,459 - GFF5441 0.33 +1.2 66,459 - GFF5441 0.33 -1.1 66,459 - GFF5441 0.33 -0.2 66,551 + GFF5441 0.53 -0.8 66,551 + GFF5441 0.53 -0.5 66,551 + GFF5441 0.53 -1.1 66,551 + GFF5441 0.53 -0.1 66,551 + GFF5441 0.53 -0.3 66,552 - GFF5441 0.53 +0.1 66,552 - GFF5441 0.53 -0.8 66,552 - GFF5441 0.53 -0.3 66,552 - GFF5441 0.53 -0.1 66,552 - GFF5441 0.53 -0.9 66,552 - GFF5441 0.53 -1.1 67,214 + GFF5442 0.37 +0.0 67,214 + GFF5442 0.37 -1.3 67,215 - GFF5442 0.38 -0.4 67,224 + GFF5442 0.38 -0.4 67,224 + GFF5442 0.38 -0.2 67,224 + GFF5442 0.38 +0.1 67,224 + GFF5442 0.38 +1.4 67,224 + GFF5442 0.38 -2.1 67,224 + GFF5442 0.38 +0.9 67,224 + GFF5442 0.38 -0.4 67,224 + GFF5442 0.38 +0.4 67,224 + GFF5442 0.38 -0.6 67,224 + GFF5442 0.38 +0.3 67,225 - GFF5442 0.38 +0.4 67,225 - GFF5442 0.38 -1.0 67,225 - GFF5442 0.38 -0.8 67,225 - GFF5442 0.38 +0.1 67,225 - GFF5442 0.38 -0.0 67,225 - GFF5442 0.38 -0.7 67,225 - GFF5442 0.38 -0.6 67,371 + GFF5442 0.51 +0.7 67,371 + GFF5442 0.51 -0.8 67,371 + GFF5442 0.51 -0.7 67,372 - GFF5442 0.51 -0.3 67,372 - GFF5442 0.51 -2.3 67,485 + GFF5442 0.60 +0.2 67,485 + GFF5442 0.60 -0.3 67,485 + GFF5442 0.60 +0.2 67,485 + GFF5442 0.60 -0.3 67,485 + GFF5442 0.60 -0.2 67,485 + GFF5442 0.60 +0.6 67,485 + GFF5442 0.60 -1.4 67,485 + GFF5442 0.60 +0.5 67,485 + GFF5442 0.60 -0.2 67,485 + GFF5442 0.60 -0.5 67,485 + GFF5442 0.60 -0.7 67,486 - GFF5442 0.60 +1.2 67,486 - GFF5442 0.60 -0.2 67,486 - GFF5442 0.60 -0.7 67,486 - GFF5442 0.60 -0.2 67,486 - GFF5442 0.60 -0.5 67,486 - GFF5442 0.60 +2.2 67,486 - GFF5442 0.60 +0.2 67,581 + GFF5442 0.68 -1.3 67,581 + GFF5442 0.68 +0.0 67,581 + GFF5442 0.68 +1.0 67,581 + GFF5442 0.68 +1.2 67,581 + GFF5442 0.68 +0.2 67,581 + GFF5442 0.68 -0.1 67,581 + GFF5442 0.68 +0.2 67,581 + GFF5442 0.68 +0.3 67,581 + GFF5442 0.68 +0.4 67,581 + GFF5442 0.68 -0.8 67,581 + GFF5442 0.68 -1.1 67,581 + GFF5442 0.68 +0.3 67,581 + GFF5442 0.68 +0.4 67,581 + GFF5442 0.68 -1.4 67,581 + GFF5442 0.68 -0.0 67,582 - GFF5442 0.69 +0.0 67,582 - GFF5442 0.69 -0.4 67,582 - GFF5442 0.69 -0.1 67,582 - GFF5442 0.69 -0.4 67,582 - GFF5442 0.69 +0.4 67,582 - GFF5442 0.69 -0.4 67,582 - GFF5442 0.69 -0.1 67,582 - GFF5442 0.69 +0.1 67,582 - GFF5442 0.69 -0.1 67,582 - GFF5442 0.69 -0.1 67,582 - GFF5442 0.69 -0.7 67,582 - GFF5442 0.69 -0.5 67,623 + GFF5442 0.72 +0.2 67,623 + GFF5442 0.72 -0.8 67,623 + GFF5442 0.72 -0.6 67,623 + GFF5442 0.72 +0.4 67,623 + GFF5442 0.72 -0.6 67,623 + GFF5442 0.72 +2.2 67,623 + GFF5442 0.72 +0.4 67,623 + GFF5442 0.72 +0.6 67,623 + GFF5442 0.72 -0.5 67,623 + GFF5442 0.72 +0.6 67,623 + GFF5442 0.72 -0.1 67,623 + GFF5442 0.72 -0.4 67,623 + GFF5442 0.72 +0.1 67,623 + GFF5442 0.72 -1.3 67,623 + GFF5442 0.72 -1.1 67,623 + GFF5442 0.72 -0.0 67,623 + GFF5442 0.72 -0.2 67,623 + GFF5442 0.72 -2.5 67,623 + GFF5442 0.72 -0.2 67,623 + GFF5442 0.72 -0.6 67,623 + GFF5442 0.72 -0.1 67,623 + GFF5442 0.72 +0.2 67,623 + GFF5442 0.72 -0.6 67,623 + GFF5442 0.72 -0.5 67,623 + GFF5442 0.72 +0.9 67,623 + GFF5442 0.72 -0.1 67,623 + GFF5442 0.72 -1.5 67,623 + GFF5442 0.72 -0.9 67,623 + GFF5442 0.72 -0.0 67,623 + GFF5442 0.72 -0.3 67,624 - GFF5442 0.72 -1.0 67,624 - GFF5442 0.72 -0.8 67,624 - GFF5442 0.72 -0.1 67,624 - GFF5442 0.72 -0.2 67,624 - GFF5442 0.72 -0.3 67,624 - GFF5442 0.72 -0.9 67,624 - GFF5442 0.72 -0.4 67,624 - GFF5442 0.72 -0.3 67,624 - GFF5442 0.72 +0.5 67,624 - GFF5442 0.72 -0.2 67,624 - GFF5442 0.72 -0.3 67,624 - GFF5442 0.72 -0.7 67,624 - GFF5442 0.72 -0.6 67,624 - GFF5442 0.72 -0.5 67,624 - GFF5442 0.72 -1.5 67,624 - GFF5442 0.72 -0.2 67,624 - GFF5442 0.72 +0.4 67,624 - GFF5442 0.72 +1.2 67,624 - GFF5442 0.72 -0.7 67,624 - GFF5442 0.72 -0.4 67,624 - GFF5442 0.72 -0.0 67,624 - GFF5442 0.72 -0.0 67,624 - GFF5442 0.72 -0.4 67,624 - GFF5442 0.72 -0.2 67,624 - GFF5442 0.72 -0.4 67,624 - GFF5442 0.72 +0.1 67,624 - GFF5442 0.72 -0.2 67,624 - GFF5442 0.72 -0.7 67,624 - GFF5442 0.72 -1.4 67,624 - GFF5442 0.72 +0.4 67,624 - GFF5442 0.72 -0.5 67,624 - GFF5442 0.72 -0.6 67,624 - GFF5442 0.72 -0.7 67,624 - GFF5442 0.72 -0.4 67,624 - GFF5442 0.72 -0.3 67,624 - GFF5442 0.72 +0.0 67,624 - GFF5442 0.72 -0.5 67,624 - GFF5442 0.72 +0.2 67,632 + GFF5442 0.73 -0.8 67,632 + GFF5442 0.73 -0.5 67,632 + GFF5442 0.73 +0.6 67,632 + GFF5442 0.73 -0.4 67,632 + GFF5442 0.73 -0.4 67,632 + GFF5442 0.73 -0.2 67,633 - GFF5442 0.73 -0.4 67,633 - GFF5442 0.73 +0.1 67,677 + GFF5442 0.77 -0.2 67,677 + GFF5442 0.77 +1.0 67,732 - GFF5442 0.81 -0.6 67,732 - GFF5442 0.81 +0.2 67,752 + GFF5442 0.83 -0.6 67,752 + GFF5442 0.83 -0.1 67,752 + GFF5442 0.83 +0.5 67,752 + GFF5442 0.83 +0.1 67,752 + GFF5442 0.83 -0.7 67,753 - GFF5442 0.83 +1.6 67,753 - GFF5442 0.83 +0.7 67,753 - GFF5442 0.83 -0.2 67,980 + +1.2 67,980 + -0.4 67,981 - -1.1 67,981 - +0.1 68,506 + GFF5443 0.19 -0.4 68,506 + GFF5443 0.19 +0.2 68,506 + GFF5443 0.19 +0.2 68,507 - GFF5443 0.19 -0.3 68,507 - GFF5443 0.19 +1.2 68,507 - GFF5443 0.19 +0.6 68,507 - GFF5443 0.19 -1.9 68,515 + GFF5443 0.20 +0.1 68,516 - GFF5443 0.20 -0.0 68,516 - GFF5443 0.20 +0.9 68,635 + GFF5443 0.24 -0.6 68,635 + GFF5443 0.24 -0.3 68,635 + GFF5443 0.24 -0.1 68,635 + GFF5443 0.24 -1.1 68,635 + GFF5443 0.24 -0.4 68,635 + GFF5443 0.24 -1.2 68,635 + GFF5443 0.24 -1.7 68,636 - GFF5443 0.24 +2.8 68,636 - GFF5443 0.24 +0.0 68,636 - GFF5443 0.24 +1.4 68,636 - GFF5443 0.24 +0.8 68,636 - GFF5443 0.24 -1.7 68,644 + GFF5443 0.24 -0.1 68,644 + GFF5443 0.24 +0.6 68,644 + GFF5443 0.24 +0.4 68,644 + GFF5443 0.24 +1.2 68,644 + GFF5443 0.24 -1.7 68,644 + GFF5443 0.24 +1.2 68,644 + GFF5443 0.24 -0.1 68,644 + GFF5443 0.24 +0.6 68,644 + GFF5443 0.24 -0.4 68,644 + GFF5443 0.24 -0.9 68,644 + GFF5443 0.24 -1.0 68,644 + GFF5443 0.24 -0.4 68,644 + GFF5443 0.24 -1.3 68,644 + GFF5443 0.24 -2.9 68,645 - GFF5443 0.25 -1.0 68,645 - GFF5443 0.25 -0.8 68,645 - GFF5443 0.25 -0.8 68,645 - GFF5443 0.25 -0.3 68,645 - GFF5443 0.25 +0.3 68,645 - GFF5443 0.25 -0.6 68,645 - GFF5443 0.25 -0.4 68,677 + GFF5443 0.26 -0.1 68,678 - GFF5443 0.26 -1.0 68,708 - GFF5443 0.27 -1.1 68,737 + GFF5443 0.28 +1.8 68,738 - GFF5443 0.28 -0.1
Or see this region's nucleotide sequence