Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6738 and GFF6739 overlap by 4 nucleotides GFF6739 and GFF6740 are separated by 204 nucleotides
GFF6738 - Uncharacterized aldehyde oxidase, molybdopterin-binding subunit, at 50,067 to 52,316
GFF6738
GFF6739 - Putative diheme cytochrome c-553, at 52,313 to 53,617
GFF6739
GFF6740 - hypothetical protein, at 53,822 to 54,547
GFF6740
Position (kb) 52
53
54 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 51.393 kb on + strand, within GFF6738 at 51.393 kb on + strand, within GFF6738 at 51.393 kb on + strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.394 kb on - strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.552 kb on + strand, within GFF6738 at 51.553 kb on - strand, within GFF6738 at 51.553 kb on - strand, within GFF6738 at 52.367 kb on + strand at 52.460 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.562 kb on + strand, within GFF6739 at 52.563 kb on - strand, within GFF6739 at 52.563 kb on - strand, within GFF6739 at 52.563 kb on - strand, within GFF6739 at 52.685 kb on + strand, within GFF6739 at 52.685 kb on + strand, within GFF6739 at 52.686 kb on - strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.736 kb on + strand, within GFF6739 at 52.898 kb on + strand, within GFF6739 at 52.898 kb on + strand, within GFF6739 at 52.898 kb on + strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 52.899 kb on - strand, within GFF6739 at 53.012 kb on + strand, within GFF6739 at 53.012 kb on + strand, within GFF6739 at 53.012 kb on + strand, within GFF6739 at 53.013 kb on - strand, within GFF6739 at 53.075 kb on + strand, within GFF6739 at 53.486 kb on + strand, within GFF6739 at 53.487 kb on - strand at 53.487 kb on - strand at 53.510 kb on + strand at 53.511 kb on - strand at 53.511 kb on - strand at 53.543 kb on + strand at 53.544 kb on - strand at 53.544 kb on - strand at 53.623 kb on + strand at 53.624 kb on - strand at 53.658 kb on - strand at 53.672 kb on - strand at 53.672 kb on - strand at 53.672 kb on - strand at 53.758 kb on - strand at 53.828 kb on - strand at 53.828 kb on - strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.864 kb on + strand at 53.865 kb on - strand at 53.865 kb on - strand at 53.895 kb on - strand, within GFF6740 at 54.020 kb on + strand, within GFF6740 at 54.106 kb on - strand, within GFF6740 at 54.106 kb on - strand, within GFF6740
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 51,393 + GFF6738 0.59 -0.2 51,393 + GFF6738 0.59 -0.6 51,393 + GFF6738 0.59 +0.4 51,394 - GFF6738 0.59 +0.1 51,394 - GFF6738 0.59 +0.4 51,394 - GFF6738 0.59 +0.5 51,394 - GFF6738 0.59 -0.1 51,552 + GFF6738 0.66 +0.0 51,552 + GFF6738 0.66 -0.9 51,552 + GFF6738 0.66 +0.9 51,552 + GFF6738 0.66 -0.4 51,553 - GFF6738 0.66 +0.2 51,553 - GFF6738 0.66 +0.1 52,367 + +0.5 52,460 + GFF6739 0.11 -0.6 52,562 + GFF6739 0.19 +0.4 52,562 + GFF6739 0.19 -0.7 52,562 + GFF6739 0.19 +1.0 52,562 + GFF6739 0.19 -0.3 52,562 + GFF6739 0.19 -0.1 52,563 - GFF6739 0.19 -1.5 52,563 - GFF6739 0.19 +1.2 52,563 - GFF6739 0.19 -0.3 52,685 + GFF6739 0.29 -2.1 52,685 + GFF6739 0.29 +1.7 52,686 - GFF6739 0.29 +4.4 52,736 + GFF6739 0.32 +0.1 52,736 + GFF6739 0.32 +0.1 52,736 + GFF6739 0.32 -0.9 52,736 + GFF6739 0.32 -0.5 52,898 + GFF6739 0.45 +0.9 52,898 + GFF6739 0.45 -0.2 52,898 + GFF6739 0.45 -1.9 52,899 - GFF6739 0.45 +0.3 52,899 - GFF6739 0.45 -1.4 52,899 - GFF6739 0.45 +0.1 52,899 - GFF6739 0.45 +1.0 52,899 - GFF6739 0.45 +0.1 53,012 + GFF6739 0.54 +0.4 53,012 + GFF6739 0.54 +0.0 53,012 + GFF6739 0.54 +0.7 53,013 - GFF6739 0.54 -0.5 53,075 + GFF6739 0.58 -0.0 53,486 + GFF6739 0.90 +0.1 53,487 - -1.2 53,487 - +0.4 53,510 + +0.2 53,511 - +0.5 53,511 - +0.4 53,543 + +1.6 53,544 - +0.8 53,544 - +0.7 53,623 + +0.2 53,624 - -0.7 53,658 - -0.2 53,672 - +1.1 53,672 - +0.6 53,672 - +0.9 53,758 - -0.4 53,828 - +0.4 53,828 - +1.4 53,864 + -0.6 53,864 + +0.3 53,864 + -0.6 53,864 + -1.2 53,864 + +0.6 53,864 + +0.0 53,864 + -1.0 53,865 - +2.3 53,865 - -0.8 53,895 - GFF6740 0.10 -0.4 54,020 + GFF6740 0.27 -1.1 54,106 - GFF6740 0.39 +0.5 54,106 - GFF6740 0.39 -0.4
Or see this region's nucleotide sequence