Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4674 and GFF4675 are separated by 3 nucleotides GFF4675 and GFF4676 are separated by 11 nucleotides GFF4676 and GFF4677 are separated by 131 nucleotides
GFF4674 - Amidohydrolase family protein, at 31,850 to 33,190
GFF4674
GFF4675 - no description, at 33,194 to 33,754
GFF4675
GFF4676 - hypothetical protein, at 33,766 to 34,902
GFF4676
GFF4677 - Small-conductance mechanosensitive channel, at 35,034 to 36,113
GFF4677
Position (kb) 33
34
35 Strain fitness (log2 ratio) -2
-1
0
1
2 at 32.783 kb on + strand, within GFF4674 at 32.784 kb on - strand, within GFF4674 at 32.784 kb on - strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.888 kb on + strand, within GFF4674 at 32.889 kb on - strand, within GFF4674 at 33.011 kb on + strand, within GFF4674 at 33.011 kb on + strand, within GFF4674 at 33.011 kb on + strand, within GFF4674 at 33.012 kb on - strand, within GFF4674 at 33.012 kb on - strand, within GFF4674 at 33.107 kb on + strand at 33.107 kb on + strand at 33.107 kb on + strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.108 kb on - strand at 33.167 kb on + strand at 33.167 kb on + strand at 33.167 kb on + strand at 33.167 kb on + strand at 33.167 kb on + strand at 33.167 kb on + strand at 33.168 kb on - strand at 33.168 kb on - strand at 33.168 kb on - strand at 33.168 kb on - strand at 33.168 kb on - strand at 33.188 kb on + strand at 33.188 kb on + strand at 33.188 kb on + strand at 33.188 kb on + strand at 33.189 kb on - strand at 33.189 kb on - strand at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.297 kb on + strand, within GFF4675 at 33.298 kb on - strand, within GFF4675 at 33.298 kb on - strand, within GFF4675 at 33.298 kb on - strand, within GFF4675 at 33.313 kb on + strand, within GFF4675 at 33.313 kb on + strand, within GFF4675 at 33.314 kb on - strand, within GFF4675 at 33.404 kb on + strand, within GFF4675 at 33.404 kb on + strand, within GFF4675 at 33.405 kb on - strand, within GFF4675 at 33.405 kb on - strand, within GFF4675 at 33.552 kb on + strand, within GFF4675 at 33.553 kb on - strand, within GFF4675 at 33.575 kb on - strand, within GFF4675 at 33.638 kb on + strand, within GFF4675 at 33.639 kb on - strand, within GFF4675 at 33.643 kb on + strand, within GFF4675 at 33.643 kb on + strand, within GFF4675 at 33.643 kb on + strand, within GFF4675 at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.767 kb on + strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.768 kb on - strand at 33.828 kb on + strand at 33.828 kb on + strand at 33.829 kb on - strand at 33.829 kb on - strand at 33.933 kb on + strand, within GFF4676 at 33.933 kb on + strand, within GFF4676 at 33.933 kb on + strand, within GFF4676 at 33.933 kb on + strand, within GFF4676 at 33.933 kb on + strand, within GFF4676 at 33.933 kb on + strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 33.934 kb on - strand, within GFF4676 at 34.040 kb on + strand, within GFF4676 at 34.040 kb on + strand, within GFF4676 at 34.041 kb on - strand, within GFF4676 at 34.041 kb on - strand, within GFF4676 at 34.041 kb on - strand, within GFF4676 at 34.151 kb on + strand, within GFF4676 at 34.151 kb on + strand, within GFF4676 at 34.152 kb on - strand, within GFF4676 at 34.152 kb on - strand, within GFF4676 at 34.152 kb on - strand, within GFF4676 at 34.226 kb on + strand, within GFF4676 at 34.227 kb on - strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.331 kb on + strand, within GFF4676 at 34.332 kb on - strand, within GFF4676 at 34.332 kb on - strand, within GFF4676 at 34.332 kb on - strand, within GFF4676 at 34.332 kb on - strand, within GFF4676 at 34.332 kb on - strand, within GFF4676 at 34.332 kb on - strand, within GFF4676 at 34.523 kb on + strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.524 kb on - strand, within GFF4676 at 34.526 kb on + strand, within GFF4676 at 34.526 kb on + strand, within GFF4676 at 34.527 kb on - strand, within GFF4676 at 34.527 kb on - strand, within GFF4676 at 34.627 kb on + strand, within GFF4676 at 34.627 kb on + strand, within GFF4676 at 34.627 kb on + strand, within GFF4676 at 34.627 kb on + strand, within GFF4676 at 34.627 kb on + strand, within GFF4676 at 34.628 kb on - strand, within GFF4676 at 34.628 kb on - strand, within GFF4676 at 34.628 kb on - strand, within GFF4676 at 34.628 kb on - strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.694 kb on + strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.695 kb on - strand, within GFF4676 at 34.697 kb on + strand, within GFF4676 at 34.697 kb on + strand, within GFF4676 at 34.697 kb on + strand, within GFF4676 at 34.697 kb on + strand, within GFF4676 at 34.697 kb on + strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.698 kb on - strand, within GFF4676 at 34.728 kb on - strand, within GFF4676 at 34.728 kb on - strand, within GFF4676 at 34.728 kb on - strand, within GFF4676 at 34.804 kb on + strand at 34.805 kb on + strand at 34.805 kb on + strand at 34.805 kb on + strand at 34.805 kb on + strand at 34.805 kb on + strand at 34.805 kb on + strand at 34.805 kb on + strand at 34.806 kb on - strand at 34.806 kb on - strand at 34.958 kb on + strand at 34.972 kb on + strand at 34.972 kb on + strand at 35.330 kb on - strand, within GFF4677 at 35.338 kb on + strand, within GFF4677 at 35.407 kb on + strand, within GFF4677 at 35.407 kb on + strand, within GFF4677 at 35.407 kb on + strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677 at 35.408 kb on - strand, within GFF4677
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 32,783 + GFF4674 0.70 -0.0 32,784 - GFF4674 0.70 -0.2 32,784 - GFF4674 0.70 +0.5 32,888 + GFF4674 0.77 -1.0 32,888 + GFF4674 0.77 +0.4 32,888 + GFF4674 0.77 +0.8 32,888 + GFF4674 0.77 -0.2 32,888 + GFF4674 0.77 -0.4 32,888 + GFF4674 0.77 +0.9 32,888 + GFF4674 0.77 -0.2 32,888 + GFF4674 0.77 +0.3 32,889 - GFF4674 0.77 -0.5 33,011 + GFF4674 0.87 +0.0 33,011 + GFF4674 0.87 -0.1 33,011 + GFF4674 0.87 -0.3 33,012 - GFF4674 0.87 -1.3 33,012 - GFF4674 0.87 -0.7 33,107 + +0.8 33,107 + +0.1 33,107 + +0.8 33,108 - -0.7 33,108 - -0.4 33,108 - -0.6 33,108 - -0.4 33,108 - +0.2 33,108 - -1.0 33,108 - +0.2 33,108 - -0.6 33,108 - -0.7 33,167 + -0.5 33,167 + +1.6 33,167 + +1.8 33,167 + -1.0 33,167 + -1.1 33,167 + +0.2 33,168 - -0.5 33,168 - -0.2 33,168 - +1.2 33,168 - +1.0 33,168 - -0.9 33,188 + -0.7 33,188 + -0.6 33,188 + -0.9 33,188 + -0.0 33,189 - +0.2 33,189 - +0.0 33,297 + GFF4675 0.18 -0.2 33,297 + GFF4675 0.18 +0.5 33,297 + GFF4675 0.18 -1.2 33,297 + GFF4675 0.18 -0.1 33,297 + GFF4675 0.18 -1.3 33,297 + GFF4675 0.18 +0.3 33,297 + GFF4675 0.18 -1.0 33,297 + GFF4675 0.18 +0.2 33,297 + GFF4675 0.18 +0.7 33,298 - GFF4675 0.19 +0.2 33,298 - GFF4675 0.19 +1.0 33,298 - GFF4675 0.19 -0.3 33,313 + GFF4675 0.21 +0.8 33,313 + GFF4675 0.21 +0.6 33,314 - GFF4675 0.21 -0.5 33,404 + GFF4675 0.37 -2.0 33,404 + GFF4675 0.37 -0.6 33,405 - GFF4675 0.38 -0.4 33,405 - GFF4675 0.38 +0.1 33,552 + GFF4675 0.64 -0.4 33,553 - GFF4675 0.64 -0.6 33,575 - GFF4675 0.68 -0.9 33,638 + GFF4675 0.79 +0.1 33,639 - GFF4675 0.79 -0.6 33,643 + GFF4675 0.80 +0.6 33,643 + GFF4675 0.80 +0.8 33,643 + GFF4675 0.80 -0.1 33,767 + +0.1 33,767 + -0.1 33,767 + +0.0 33,767 + -0.2 33,767 + -0.3 33,767 + +0.2 33,767 + -0.5 33,767 + -1.4 33,767 + +0.8 33,767 + -0.5 33,767 + -0.5 33,767 + -0.9 33,767 + -0.0 33,767 + +0.0 33,767 + +1.0 33,767 + +0.6 33,767 + -0.7 33,767 + -0.3 33,767 + +1.4 33,768 - +0.6 33,768 - +0.3 33,768 - +0.2 33,768 - +0.9 33,768 - +0.5 33,768 - +0.1 33,768 - +1.1 33,768 - +0.2 33,768 - -0.4 33,768 - -0.6 33,768 - -0.5 33,828 + +0.3 33,828 + -0.4 33,829 - +0.8 33,829 - +0.5 33,933 + GFF4676 0.15 -0.1 33,933 + GFF4676 0.15 +0.4 33,933 + GFF4676 0.15 +0.4 33,933 + GFF4676 0.15 -0.2 33,933 + GFF4676 0.15 +0.2 33,933 + GFF4676 0.15 +0.1 33,934 - GFF4676 0.15 -1.2 33,934 - GFF4676 0.15 +1.0 33,934 - GFF4676 0.15 -0.0 33,934 - GFF4676 0.15 +1.4 33,934 - GFF4676 0.15 -0.2 33,934 - GFF4676 0.15 -0.8 33,934 - GFF4676 0.15 +1.0 34,040 + GFF4676 0.24 +0.3 34,040 + GFF4676 0.24 +0.4 34,041 - GFF4676 0.24 -0.3 34,041 - GFF4676 0.24 -0.4 34,041 - GFF4676 0.24 -0.2 34,151 + GFF4676 0.34 -0.7 34,151 + GFF4676 0.34 -1.5 34,152 - GFF4676 0.34 +0.2 34,152 - GFF4676 0.34 -0.1 34,152 - GFF4676 0.34 -0.4 34,226 + GFF4676 0.40 +1.2 34,227 - GFF4676 0.41 -0.3 34,331 + GFF4676 0.50 +0.2 34,331 + GFF4676 0.50 -0.2 34,331 + GFF4676 0.50 +0.5 34,331 + GFF4676 0.50 -0.2 34,331 + GFF4676 0.50 +0.8 34,331 + GFF4676 0.50 +0.4 34,331 + GFF4676 0.50 -0.5 34,331 + GFF4676 0.50 +0.2 34,331 + GFF4676 0.50 -0.0 34,331 + GFF4676 0.50 -0.4 34,331 + GFF4676 0.50 +0.7 34,331 + GFF4676 0.50 -0.5 34,332 - GFF4676 0.50 -1.8 34,332 - GFF4676 0.50 -0.2 34,332 - GFF4676 0.50 -0.2 34,332 - GFF4676 0.50 -0.5 34,332 - GFF4676 0.50 -0.1 34,332 - GFF4676 0.50 +1.6 34,523 + GFF4676 0.67 +0.8 34,524 - GFF4676 0.67 -0.1 34,524 - GFF4676 0.67 +0.6 34,524 - GFF4676 0.67 -0.4 34,524 - GFF4676 0.67 +0.0 34,524 - GFF4676 0.67 +0.0 34,524 - GFF4676 0.67 -0.6 34,524 - GFF4676 0.67 +0.1 34,526 + GFF4676 0.67 -1.0 34,526 + GFF4676 0.67 -0.8 34,527 - GFF4676 0.67 -1.2 34,527 - GFF4676 0.67 +0.2 34,627 + GFF4676 0.76 -0.6 34,627 + GFF4676 0.76 +1.4 34,627 + GFF4676 0.76 +1.3 34,627 + GFF4676 0.76 -0.2 34,627 + GFF4676 0.76 -0.1 34,628 - GFF4676 0.76 +0.6 34,628 - GFF4676 0.76 -0.6 34,628 - GFF4676 0.76 +1.5 34,628 - GFF4676 0.76 -0.4 34,694 + GFF4676 0.82 -0.9 34,694 + GFF4676 0.82 +0.4 34,694 + GFF4676 0.82 +0.8 34,694 + GFF4676 0.82 -0.2 34,694 + GFF4676 0.82 +0.9 34,694 + GFF4676 0.82 -0.5 34,694 + GFF4676 0.82 -0.5 34,694 + GFF4676 0.82 -0.5 34,694 + GFF4676 0.82 +0.4 34,695 - GFF4676 0.82 -0.0 34,695 - GFF4676 0.82 -0.1 34,695 - GFF4676 0.82 +0.1 34,695 - GFF4676 0.82 +0.8 34,695 - GFF4676 0.82 -0.4 34,695 - GFF4676 0.82 -0.6 34,695 - GFF4676 0.82 -0.8 34,697 + GFF4676 0.82 -0.3 34,697 + GFF4676 0.82 -1.2 34,697 + GFF4676 0.82 +0.3 34,697 + GFF4676 0.82 +0.6 34,697 + GFF4676 0.82 -0.9 34,698 - GFF4676 0.82 -0.2 34,698 - GFF4676 0.82 -1.0 34,698 - GFF4676 0.82 -2.1 34,698 - GFF4676 0.82 +0.8 34,698 - GFF4676 0.82 -0.7 34,698 - GFF4676 0.82 -0.5 34,698 - GFF4676 0.82 -2.0 34,698 - GFF4676 0.82 +0.8 34,698 - GFF4676 0.82 -0.1 34,698 - GFF4676 0.82 -0.6 34,728 - GFF4676 0.85 -0.3 34,728 - GFF4676 0.85 +0.5 34,728 - GFF4676 0.85 +0.8 34,804 + -0.7 34,805 + +0.3 34,805 + -0.6 34,805 + -0.2 34,805 + -0.1 34,805 + -0.2 34,805 + -0.2 34,805 + -1.0 34,806 - -0.2 34,806 - -0.9 34,958 + -0.6 34,972 + -0.6 34,972 + +0.3 35,330 - GFF4677 0.27 -0.4 35,338 + GFF4677 0.28 -1.0 35,407 + GFF4677 0.35 +0.6 35,407 + GFF4677 0.35 +1.2 35,407 + GFF4677 0.35 -1.8 35,408 - GFF4677 0.35 +0.3 35,408 - GFF4677 0.35 -1.2 35,408 - GFF4677 0.35 -0.9 35,408 - GFF4677 0.35 -0.1 35,408 - GFF4677 0.35 -0.6 35,408 - GFF4677 0.35 -0.9 35,408 - GFF4677 0.35 +0.0 35,408 - GFF4677 0.35 +0.2 35,408 - GFF4677 0.35 -0.2 35,408 - GFF4677 0.35 -0.3
Or see this region's nucleotide sequence