Strain Fitness in Variovorax sp. SCN45 around GFF3294

Experiment: phage_bap4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage_bap4
117,684	+				-0.6
117,684	+				+0.0
117,684	+				-0.3
117,684	+				-0.3
117,684	+				+0.1
117,685	-				+0.1
117,685	-				-0.5
117,690	+				-0.5
117,690	+				-0.0
117,690	+				-0.4
117,690	+				-0.5
117,690	+				-1.3
117,690	+				+0.1
117,690	+				-0.1
117,690	+				-0.4
117,690	+				-0.2
117,690	+				-2.6
117,690	+				-0.8
117,690	+				+0.3
117,691	-				-0.9
117,691	-				-0.7
117,691	-				+1.8
117,691	-				-0.9
117,726	-				-1.6
117,726	-				-0.3
117,732	+				-0.2
117,732	+				-1.2
117,732	+				-0.2
117,765	+				-0.3
117,765	+				+0.3
117,765	+				-0.2
117,765	+				-0.1
117,766	-				-1.5
117,766	-				-0.6
117,766	-				-0.9
117,766	-				+0.5
117,768	+				-0.5
117,768	+				+0.1
117,768	+				-0.0
117,768	+				-0.9
117,768	+				-0.3
117,768	+				-0.7
117,768	+				-0.3
117,769	-				-0.3
117,769	-				+0.2
117,769	-				-0.4
117,769	-				-0.1
117,769	-				-1.1
117,769	-				-1.0
117,769	-				-0.5
117,769	-				-1.0
117,769	-				-1.6
117,769	-				+0.8
117,769	-				-0.4
117,769	-				-0.0
117,769	-				-0.8
118,095	+		GFF3293	0.43	+0.4
118,095	+		GFF3293	0.43	+0.8
118,095	+		GFF3293	0.43	-1.9
118,095	+		GFF3293	0.43	+0.4
118,095	+		GFF3293	0.43	-1.0
118,096	-		GFF3293	0.43	-0.5
118,096	-		GFF3293	0.43	-1.3
118,096	-		GFF3293	0.43	-0.2
118,096	-		GFF3293	0.43	-0.5
118,096	-		GFF3293	0.43	+0.4
118,096	-		GFF3293	0.43	-0.8
118,215	+		GFF3293	0.55	-0.6
118,215	+		GFF3293	0.55	-2.8
118,216	-		GFF3293	0.55	-1.0
118,350	+		GFF3293	0.70	-0.0
118,351	-		GFF3293	0.70	+0.3
118,418	+		GFF3293	0.77	-0.7
118,418	+		GFF3293	0.77	-0.0
118,418	+		GFF3293	0.77	-0.7
118,419	-		GFF3293	0.77	-0.9
118,419	-		GFF3293	0.77	-1.6
118,419	-		GFF3293	0.77	-0.2
118,425	+		GFF3293	0.77	-0.5
118,425	+		GFF3293	0.77	-2.2
118,425	+		GFF3293	0.77	-1.8
118,425	+		GFF3293	0.77	+0.5
118,425	+		GFF3293	0.77	+0.5
118,425	+		GFF3293	0.77	-0.7
118,425	+		GFF3293	0.77	-1.1
118,425	+		GFF3293	0.77	-0.1
118,425	+		GFF3293	0.77	+0.6
118,425	+		GFF3293	0.77	-0.6
118,426	-		GFF3293	0.77	-0.8
118,426	-		GFF3293	0.77	-0.6
118,426	-		GFF3293	0.77	-2.0
118,426	-		GFF3293	0.77	-1.5
118,426	-		GFF3293	0.77	-0.2
118,426	-		GFF3293	0.77	-0.6
118,426	-		GFF3293	0.77	-0.8
118,426	-		GFF3293	0.77	-0.5
118,426	-		GFF3293	0.77	-0.5
118,426	-		GFF3293	0.77	+0.7
118,426	-		GFF3293	0.77	-0.6
118,426	-		GFF3293	0.77	-0.3
118,434	+		GFF3293	0.78	+0.4
118,434	+		GFF3293	0.78	+0.5
118,434	+		GFF3293	0.78	-0.4
118,434	+		GFF3293	0.78	-0.4
118,435	-		GFF3293	0.78	-0.5
118,435	-		GFF3293	0.78	-0.9
118,435	-		GFF3293	0.78	-0.5
118,435	-		GFF3293	0.78	+0.6
118,544	+		GFF3293	0.90	-1.6
118,544	+		GFF3293	0.90	+0.4
118,793	-		GFF3294	0.11	-0.4
119,063	-		GFF3294	0.32	-0.3
119,063	-		GFF3294	0.32	+0.4
119,068	+		GFF3294	0.32	+0.5
119,068	+		GFF3294	0.32	-0.6
119,068	+		GFF3294	0.32	-0.5
119,068	+		GFF3294	0.32	-0.8
119,068	+		GFF3294	0.32	-0.8
119,068	+		GFF3294	0.32	-0.2
119,068	+		GFF3294	0.32	-0.7
119,069	-		GFF3294	0.32	+0.3
119,069	-		GFF3294	0.32	-0.5
119,069	-		GFF3294	0.32	-0.6
119,069	-		GFF3294	0.32	+0.3
119,069	-		GFF3294	0.32	-1.4
119,069	-		GFF3294	0.32	-0.8
119,069	-		GFF3294	0.32	-0.5
119,101	+		GFF3294	0.35	+0.2
119,101	+		GFF3294	0.35	-0.8
119,101	+		GFF3294	0.35	-0.3
119,101	+		GFF3294	0.35	-1.0
119,101	+		GFF3294	0.35	+0.5
119,101	+		GFF3294	0.35	+1.1
119,101	+		GFF3294	0.35	-0.6
119,102	-		GFF3294	0.35	-0.9
119,102	-		GFF3294	0.35	+0.8
119,102	-		GFF3294	0.35	+0.1
119,102	-		GFF3294	0.35	+0.2
119,102	-		GFF3294	0.35	+0.3
119,154	+		GFF3294	0.39	-1.5
119,154	+		GFF3294	0.39	+1.5
119,154	+		GFF3294	0.39	+0.2
119,155	-		GFF3294	0.39	-0.4
119,155	-		GFF3294	0.39	-0.5
119,155	-		GFF3294	0.39	-0.4
119,155	-		GFF3294	0.39	-1.1
119,227	+		GFF3294	0.45	+0.7
119,227	+		GFF3294	0.45	-0.3
119,227	+		GFF3294	0.45	-0.4
119,228	-		GFF3294	0.45	-0.7
119,485	+		GFF3294	0.65	-0.3
119,485	+		GFF3294	0.65	-0.4
119,486	-		GFF3294	0.65	-1.3
119,533	+		GFF3294	0.69	+1.1
119,533	+		GFF3294	0.69	-0.3
119,534	-		GFF3294	0.69	+0.5
119,534	-		GFF3294	0.69	-0.0
120,042	+		GFF3295	0.13	-0.2
120,042	+		GFF3295	0.13	-0.2
120,042	+		GFF3295	0.13	+1.5
120,042	+		GFF3295	0.13	-0.6
120,042	+		GFF3295	0.13	+0.0
120,042	+		GFF3295	0.13	-0.5
120,042	+		GFF3295	0.13	-1.3
120,042	+		GFF3295	0.13	-0.6
120,042	+		GFF3295	0.13	-0.6
120,043	-		GFF3295	0.13	+0.3
120,043	-		GFF3295	0.13	+0.5
120,043	-		GFF3295	0.13	+0.6
120,043	-		GFF3295	0.13	-0.6
120,441	+		GFF3295	0.64	-0.6
120,730	+				-0.0
120,730	+				+1.1
120,730	+				-0.0
120,730	+				-0.4
120,730	+				+0.0
120,730	+				-1.6
120,730	+				+1.1
120,730	+				-0.4
120,730	+				-1.2
120,730	+				-2.3
120,730	+				-0.5
120,730	+				-0.3
120,730	+				-0.1
120,730	+				-0.2
120,730	+				-0.6
120,730	+				-0.2
120,730	+				-0.4
120,731	-				-0.5
120,731	-				-0.6
120,731	-				-0.3
120,731	-				+0.1
120,731	-				+0.4
120,731	-				-0.5
120,731	-				-0.4
120,731	-				-0.2
120,731	-				-0.3
120,731	-				-1.5
120,731	-				-2.7
120,755	+				-1.3
120,756	-				-0.4
120,806	+				-0.6
120,807	-				-1.1
120,807	-				+0.2
120,807	-				-0.7
120,854	+				-0.1
120,854	+				-0.8
120,854	+				+1.1
120,854	+				-0.3
120,854	+				-0.6
120,854	+				+0.1
120,854	+				-0.2
120,854	+				-0.1
120,854	+				-0.5
120,854	+				-0.3
120,855	-				-0.8
120,855	-				+1.1
120,855	-				-2.1
120,906	-				-0.5