Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1322 and GFF1323 are separated by 22 nucleotides GFF1323 and GFF1324 are separated by 155 nucleotides
GFF1322 - [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme, at 658,612 to 661,218
GFF1322
GFF1323 - Methionine aminopeptidase (EC 3.4.11.18), at 661,241 to 662,065
GFF1323
GFF1324 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3), at 662,221 to 666,189
GFF1324
Position (kb) 661
662
663 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 660.332 kb on + strand, within GFF1322 at 660.332 kb on + strand, within GFF1322 at 660.333 kb on - strand, within GFF1322 at 660.333 kb on - strand, within GFF1322 at 660.333 kb on - strand, within GFF1322 at 660.333 kb on - strand, within GFF1322 at 660.335 kb on + strand, within GFF1322 at 660.335 kb on + strand, within GFF1322 at 660.335 kb on + strand, within GFF1322 at 660.335 kb on + strand, within GFF1322 at 660.336 kb on - strand, within GFF1322 at 660.384 kb on - strand, within GFF1322 at 660.647 kb on + strand, within GFF1322 at 660.647 kb on + strand, within GFF1322 at 660.977 kb on + strand at 660.978 kb on - strand at 661.173 kb on - strand at 661.389 kb on + strand, within GFF1323 at 661.389 kb on + strand, within GFF1323 at 661.389 kb on + strand, within GFF1323 at 661.389 kb on + strand, within GFF1323 at 661.390 kb on - strand, within GFF1323 at 661.390 kb on - strand, within GFF1323 at 661.390 kb on - strand, within GFF1323 at 661.500 kb on + strand, within GFF1323 at 661.501 kb on - strand, within GFF1323 at 661.501 kb on - strand, within GFF1323 at 661.501 kb on - strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.719 kb on + strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.720 kb on - strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.884 kb on + strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.885 kb on - strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.923 kb on + strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.924 kb on - strand, within GFF1323 at 661.986 kb on + strand at 661.986 kb on + strand at 661.986 kb on + strand at 661.986 kb on + strand at 661.986 kb on + strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 661.987 kb on - strand at 662.052 kb on + strand at 662.052 kb on + strand at 662.052 kb on + strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.053 kb on - strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.056 kb on + strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.057 kb on - strand at 662.140 kb on + strand at 662.140 kb on + strand at 662.141 kb on - strand at 662.141 kb on - strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.216 kb on + strand at 662.392 kb on + strand at 662.393 kb on - strand at 662.427 kb on + strand at 662.428 kb on - strand at 662.542 kb on + strand at 662.542 kb on + strand at 662.543 kb on - strand at 662.797 kb on + strand, within GFF1324 at 662.798 kb on - strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.998 kb on + strand, within GFF1324 at 662.999 kb on - strand, within GFF1324
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 660,332 + GFF1322 0.66 -0.2 660,332 + GFF1322 0.66 +0.9 660,333 - GFF1322 0.66 -0.7 660,333 - GFF1322 0.66 -0.2 660,333 - GFF1322 0.66 +0.3 660,333 - GFF1322 0.66 -0.4 660,335 + GFF1322 0.66 +1.9 660,335 + GFF1322 0.66 +0.3 660,335 + GFF1322 0.66 -1.8 660,335 + GFF1322 0.66 +1.9 660,336 - GFF1322 0.66 +0.9 660,384 - GFF1322 0.68 -1.3 660,647 + GFF1322 0.78 -1.9 660,647 + GFF1322 0.78 +0.1 660,977 + +0.2 660,978 - +0.3 661,173 - -2.0 661,389 + GFF1323 0.18 +0.1 661,389 + GFF1323 0.18 -0.3 661,389 + GFF1323 0.18 -0.1 661,389 + GFF1323 0.18 -0.6 661,390 - GFF1323 0.18 +0.5 661,390 - GFF1323 0.18 -1.1 661,390 - GFF1323 0.18 -0.9 661,500 + GFF1323 0.31 +0.6 661,501 - GFF1323 0.32 -0.8 661,501 - GFF1323 0.32 +0.3 661,501 - GFF1323 0.32 -0.3 661,719 + GFF1323 0.58 -0.4 661,719 + GFF1323 0.58 +0.2 661,719 + GFF1323 0.58 +1.1 661,719 + GFF1323 0.58 -0.5 661,719 + GFF1323 0.58 +0.6 661,719 + GFF1323 0.58 -0.9 661,719 + GFF1323 0.58 -0.6 661,719 + GFF1323 0.58 +1.9 661,719 + GFF1323 0.58 -0.2 661,719 + GFF1323 0.58 -0.5 661,719 + GFF1323 0.58 -1.2 661,719 + GFF1323 0.58 -0.3 661,719 + GFF1323 0.58 -1.1 661,719 + GFF1323 0.58 +0.3 661,719 + GFF1323 0.58 -0.5 661,720 - GFF1323 0.58 -1.2 661,720 - GFF1323 0.58 -0.5 661,720 - GFF1323 0.58 -1.2 661,720 - GFF1323 0.58 -0.9 661,720 - GFF1323 0.58 -0.2 661,720 - GFF1323 0.58 -0.5 661,720 - GFF1323 0.58 -0.0 661,720 - GFF1323 0.58 -0.2 661,720 - GFF1323 0.58 -0.9 661,720 - GFF1323 0.58 +0.1 661,720 - GFF1323 0.58 +0.7 661,720 - GFF1323 0.58 -1.8 661,720 - GFF1323 0.58 -0.4 661,720 - GFF1323 0.58 -0.6 661,884 + GFF1323 0.78 -1.1 661,884 + GFF1323 0.78 -0.2 661,884 + GFF1323 0.78 -0.3 661,884 + GFF1323 0.78 -0.8 661,884 + GFF1323 0.78 -0.5 661,885 - GFF1323 0.78 +0.8 661,885 - GFF1323 0.78 +0.7 661,885 - GFF1323 0.78 -0.1 661,885 - GFF1323 0.78 -0.5 661,885 - GFF1323 0.78 -0.5 661,885 - GFF1323 0.78 -0.5 661,885 - GFF1323 0.78 +0.2 661,885 - GFF1323 0.78 -0.8 661,923 + GFF1323 0.83 -1.1 661,923 + GFF1323 0.83 +0.3 661,923 + GFF1323 0.83 +1.5 661,923 + GFF1323 0.83 -0.6 661,923 + GFF1323 0.83 -0.4 661,923 + GFF1323 0.83 -0.6 661,923 + GFF1323 0.83 -1.3 661,923 + GFF1323 0.83 -1.1 661,924 - GFF1323 0.83 +0.9 661,924 - GFF1323 0.83 +0.3 661,924 - GFF1323 0.83 -0.8 661,924 - GFF1323 0.83 -0.2 661,924 - GFF1323 0.83 +0.1 661,924 - GFF1323 0.83 +1.1 661,924 - GFF1323 0.83 -0.6 661,924 - GFF1323 0.83 -0.5 661,924 - GFF1323 0.83 +0.4 661,924 - GFF1323 0.83 +0.3 661,924 - GFF1323 0.83 -0.6 661,924 - GFF1323 0.83 -0.9 661,924 - GFF1323 0.83 +0.9 661,924 - GFF1323 0.83 -0.8 661,924 - GFF1323 0.83 -0.3 661,924 - GFF1323 0.83 -1.6 661,924 - GFF1323 0.83 -0.2 661,986 + -0.0 661,986 + +0.2 661,986 + -1.4 661,986 + +0.7 661,986 + -0.4 661,987 - -0.4 661,987 - -2.4 661,987 - -0.7 661,987 - -0.5 661,987 - -0.9 661,987 - -0.2 662,052 + -1.5 662,052 + -0.1 662,052 + -0.9 662,053 - -0.2 662,053 - -1.6 662,053 - -3.1 662,053 - -0.2 662,053 - +0.5 662,053 - -0.4 662,056 + +1.9 662,056 + -0.0 662,056 + -0.8 662,056 + -1.6 662,056 + +0.4 662,056 + +0.2 662,057 - +0.2 662,057 - -0.3 662,057 - -0.1 662,057 - +1.6 662,057 - -0.1 662,057 - -0.5 662,057 - +0.6 662,140 + +0.3 662,140 + -0.7 662,141 - -0.6 662,141 - -2.1 662,216 + -1.8 662,216 + +1.9 662,216 + -1.4 662,216 + -0.3 662,216 + -0.5 662,392 + +1.1 662,393 - +0.7 662,427 + +0.3 662,428 - -0.7 662,542 + -0.1 662,542 + +0.8 662,543 - +1.9 662,797 + GFF1324 0.15 -0.4 662,798 - GFF1324 0.15 -0.4 662,998 + GFF1324 0.20 -0.4 662,998 + GFF1324 0.20 -0.9 662,998 + GFF1324 0.20 +0.9 662,998 + GFF1324 0.20 +0.3 662,999 - GFF1324 0.20 -0.4
Or see this region's nucleotide sequence