Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF853 and GFF854 overlap by 4 nucleotides GFF854 and GFF855 are separated by 31 nucleotides GFF855 and GFF856 are separated by 9 nucleotides GFF856 and GFF857 are separated by 22 nucleotides
GFF853 - hypothetical protein, at 161,111 to 162,307
GFF853
GFF854 - hypothetical protein, at 162,304 to 162,867
GFF854
GFF855 - Palmitoyl-CoA hydrolase( EC:3.1.2.2 ), at 162,899 to 163,588
GFF855
GFF856 - no description, at 163,598 to 164,095
GFF856
GFF857 - no description, at 164,118 to 164,975
GFF857
Position (kb) 162
163
164 Strain fitness (log2 ratio) -1
0
1 at 162.102 kb on + strand, within GFF853 at 162.389 kb on + strand, within GFF854 at 162.465 kb on - strand, within GFF854 at 162.621 kb on + strand, within GFF854 at 162.621 kb on + strand, within GFF854 at 162.791 kb on + strand, within GFF854 at 162.791 kb on + strand, within GFF854 at 162.883 kb on + strand at 162.883 kb on + strand at 162.883 kb on + strand at 162.884 kb on - strand at 163.254 kb on + strand, within GFF855 at 163.254 kb on + strand, within GFF855 at 163.255 kb on - strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.347 kb on + strand, within GFF855 at 163.348 kb on - strand, within GFF855 at 163.348 kb on - strand, within GFF855 at 163.540 kb on - strand at 163.560 kb on + strand at 163.599 kb on + strand at 163.600 kb on - strand at 163.728 kb on + strand, within GFF856 at 163.729 kb on - strand, within GFF856 at 163.790 kb on - strand, within GFF856 at 163.891 kb on - strand, within GFF856 at 164.212 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.218 kb on + strand, within GFF857 at 164.219 kb on - strand, within GFF857 at 164.219 kb on - strand, within GFF857 at 164.219 kb on - strand, within GFF857 at 164.222 kb on + strand, within GFF857 at 164.223 kb on - strand, within GFF857
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 162,102 + GFF853 0.83 +0.7 162,389 + GFF854 0.15 -0.0 162,465 - GFF854 0.29 -1.1 162,621 + GFF854 0.56 -1.1 162,621 + GFF854 0.56 +0.1 162,791 + GFF854 0.86 -0.4 162,791 + GFF854 0.86 +0.9 162,883 + -0.3 162,883 + +1.1 162,883 + -0.3 162,884 - -0.1 163,254 + GFF855 0.51 -0.2 163,254 + GFF855 0.51 -1.2 163,255 - GFF855 0.52 -0.6 163,347 + GFF855 0.65 -1.0 163,347 + GFF855 0.65 -0.9 163,347 + GFF855 0.65 +0.2 163,347 + GFF855 0.65 +1.1 163,347 + GFF855 0.65 -0.5 163,348 - GFF855 0.65 -0.0 163,348 - GFF855 0.65 -1.1 163,540 - -0.9 163,560 + +0.7 163,599 + +0.2 163,600 - -0.3 163,728 + GFF856 0.26 +0.8 163,729 - GFF856 0.26 -0.5 163,790 - GFF856 0.39 -0.1 163,891 - GFF856 0.59 -0.4 164,212 + GFF857 0.11 -1.0 164,218 + GFF857 0.12 +0.4 164,218 + GFF857 0.12 +0.6 164,218 + GFF857 0.12 -0.5 164,218 + GFF857 0.12 -0.8 164,218 + GFF857 0.12 +0.6 164,218 + GFF857 0.12 +0.7 164,218 + GFF857 0.12 -0.4 164,219 - GFF857 0.12 +0.7 164,219 - GFF857 0.12 -0.2 164,219 - GFF857 0.12 +0.1 164,222 + GFF857 0.12 +1.3 164,223 - GFF857 0.12 -0.4
Or see this region's nucleotide sequence