Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7180 and GFF7181 are separated by 273 nucleotides
GFF7180 - no description, at 44,655 to 45,350
GFF7180
GFF7181 - no description, at 45,624 to 45,743
GFF7181
Position (kb) 45
46 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.704 kb on + strand at 44.705 kb on - strand at 45.135 kb on + strand, within GFF7180 at 45.136 kb on - strand, within GFF7180 at 45.296 kb on + strand at 45.296 kb on + strand at 45.296 kb on + strand at 45.296 kb on + strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.335 kb on + strand at 45.377 kb on + strand at 45.377 kb on + strand at 45.384 kb on + strand at 45.384 kb on + strand at 45.384 kb on + strand at 45.385 kb on - strand at 45.385 kb on - strand at 45.385 kb on - strand at 45.385 kb on - strand at 45.421 kb on - strand at 45.441 kb on + strand at 45.442 kb on - strand at 45.442 kb on - strand at 45.479 kb on - strand at 45.479 kb on - strand at 45.479 kb on - strand at 45.509 kb on + strand at 45.509 kb on + strand at 45.509 kb on + strand at 45.509 kb on + strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.537 kb on + strand at 45.538 kb on - strand at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.710 kb on - strand, within GFF7181
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 44,641 + +0.2 44,641 + -0.2 44,641 + +0.9 44,641 + +0.2 44,641 + +1.1 44,641 + +0.5 44,642 - -1.4 44,642 - +0.6 44,642 - -1.1 44,642 - -0.4 44,704 + -0.3 44,705 - +0.2 45,135 + GFF7180 0.69 -0.3 45,136 - GFF7180 0.69 -0.3 45,296 + -0.4 45,296 + +1.5 45,296 + -1.1 45,296 + -0.6 45,297 - +1.1 45,297 - -0.1 45,297 - +0.4 45,297 - -0.1 45,297 - -0.2 45,335 + +0.5 45,377 + -1.8 45,377 + +0.4 45,384 + +0.0 45,384 + +0.3 45,384 + -0.3 45,385 - -0.2 45,385 - -0.2 45,385 - +1.4 45,385 - +0.4 45,421 - +0.5 45,441 + +0.3 45,442 - -0.8 45,442 - +0.5 45,479 - -0.1 45,479 - +0.1 45,479 - -0.0 45,509 + +1.6 45,509 + -0.0 45,509 + -0.0 45,509 + -0.1 45,510 - +1.1 45,510 - -0.4 45,510 - -0.0 45,510 - +0.8 45,510 - -0.3 45,537 + -0.1 45,538 - -1.4 45,642 + GFF7181 0.15 +0.5 45,642 + GFF7181 0.15 +2.8 45,642 + GFF7181 0.15 +0.3 45,642 + GFF7181 0.15 -0.5 45,642 + GFF7181 0.15 +1.4 45,642 + GFF7181 0.15 -1.1 45,642 + GFF7181 0.15 +0.0 45,642 + GFF7181 0.15 +0.1 45,643 - GFF7181 0.16 -0.2 45,643 - GFF7181 0.16 +0.3 45,643 - GFF7181 0.16 +0.5 45,643 - GFF7181 0.16 -0.4 45,710 - GFF7181 0.72 -0.9
Or see this region's nucleotide sequence