Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF706 and GFF707 overlap by 4 nucleotides GFF707 and GFF708 are separated by 4 nucleotides
GFF706 - hypothetical protein, at 762,730 to 764,142
GFF706
GFF707 - probable integral membrane protein NMA1898, at 764,139 to 765,566
GFF707
GFF708 - Oxidoreductase, GMC family, at 765,571 to 767,286
GFF708
Position (kb) 764
765
766 Strain fitness (log2 ratio) -2
-1
0
1
2 at 763.360 kb on + strand, within GFF706 at 763.361 kb on - strand, within GFF706 at 763.546 kb on + strand, within GFF706 at 763.547 kb on - strand, within GFF706 at 763.639 kb on + strand, within GFF706 at 763.639 kb on + strand, within GFF706 at 763.640 kb on - strand, within GFF706 at 763.640 kb on - strand, within GFF706 at 763.640 kb on - strand, within GFF706 at 763.643 kb on - strand, within GFF706 at 763.643 kb on - strand, within GFF706 at 764.659 kb on - strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.724 kb on + strand, within GFF707 at 764.725 kb on - strand, within GFF707 at 764.725 kb on - strand, within GFF707 at 764.725 kb on - strand, within GFF707 at 764.986 kb on - strand, within GFF707 at 764.986 kb on - strand, within GFF707 at 765.716 kb on + strand at 765.996 kb on - strand, within GFF708 at 765.996 kb on - strand, within GFF708 at 766.298 kb on + strand, within GFF708 at 766.298 kb on + strand, within GFF708 at 766.298 kb on + strand, within GFF708 at 766.299 kb on - strand, within GFF708 at 766.299 kb on - strand, within GFF708 at 766.361 kb on + strand, within GFF708 at 766.362 kb on - strand, within GFF708
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 763,360 + GFF706 0.45 -0.2 763,361 - GFF706 0.45 -1.2 763,546 + GFF706 0.58 +0.6 763,547 - GFF706 0.58 +1.0 763,639 + GFF706 0.64 +0.5 763,639 + GFF706 0.64 +0.4 763,640 - GFF706 0.64 +0.1 763,640 - GFF706 0.64 -0.2 763,640 - GFF706 0.64 +0.2 763,643 - GFF706 0.65 +0.7 763,643 - GFF706 0.65 -0.2 764,659 - GFF707 0.36 -0.3 764,724 + GFF707 0.41 +0.1 764,724 + GFF707 0.41 +1.1 764,724 + GFF707 0.41 +0.9 764,724 + GFF707 0.41 -1.5 764,724 + GFF707 0.41 +0.2 764,724 + GFF707 0.41 -0.4 764,724 + GFF707 0.41 -0.3 764,724 + GFF707 0.41 -0.2 764,724 + GFF707 0.41 -0.5 764,725 - GFF707 0.41 -0.5 764,725 - GFF707 0.41 +0.4 764,725 - GFF707 0.41 -0.1 764,986 - GFF707 0.59 +0.6 764,986 - GFF707 0.59 +1.2 765,716 + -2.1 765,996 - GFF708 0.25 +0.6 765,996 - GFF708 0.25 +0.2 766,298 + GFF708 0.42 +0.3 766,298 + GFF708 0.42 -0.3 766,298 + GFF708 0.42 +1.0 766,299 - GFF708 0.42 +0.1 766,299 - GFF708 0.42 +0.6 766,361 + GFF708 0.46 +0.0 766,362 - GFF708 0.46 +1.8
Or see this region's nucleotide sequence