Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6792 and GFF6793 overlap by 4 nucleotides GFF6793 and GFF6794 are separated by 264 nucleotides GFF6794 and GFF6795 overlap by 4 nucleotides GFF6795 and GFF6796 are separated by 19 nucleotides
GFF6792 - Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46), at 40,390 to 41,394
GFF6792
GFF6793 - hypothetical protein, at 41,391 to 41,933
GFF6793
GFF6794 - hypothetical protein, at 42,198 to 43,739
GFF6794
GFF6795 - similar to puromycin N-acetyltransferase, at 43,736 to 44,224
GFF6795
GFF6796 - Predicted kinase, at 44,244 to 44,750
GFF6796
Position (kb) 42
43
44 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 41.446 kb on + strand, within GFF6793 at 41.446 kb on + strand, within GFF6793 at 41.446 kb on + strand, within GFF6793 at 41.446 kb on + strand, within GFF6793 at 41.446 kb on + strand, within GFF6793 at 41.447 kb on - strand, within GFF6793 at 41.447 kb on - strand, within GFF6793 at 41.447 kb on - strand, within GFF6793 at 41.633 kb on - strand, within GFF6793 at 41.633 kb on - strand, within GFF6793 at 41.633 kb on - strand, within GFF6793 at 41.851 kb on + strand, within GFF6793 at 41.852 kb on - strand, within GFF6793 at 41.852 kb on - strand, within GFF6793 at 41.852 kb on - strand, within GFF6793 at 41.852 kb on - strand, within GFF6793 at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.975 kb on + strand at 41.976 kb on - strand at 41.976 kb on - strand at 41.976 kb on - strand at 41.976 kb on - strand at 42.027 kb on + strand at 42.027 kb on + strand at 42.028 kb on - strand at 42.028 kb on - strand at 42.028 kb on - strand at 42.028 kb on - strand at 42.028 kb on - strand at 42.062 kb on + strand at 42.063 kb on - strand at 42.079 kb on + strand at 42.079 kb on + strand at 42.079 kb on + strand at 42.079 kb on + strand at 42.080 kb on - strand at 42.080 kb on - strand at 42.080 kb on - strand at 42.080 kb on - strand at 42.423 kb on + strand, within GFF6794 at 42.423 kb on + strand, within GFF6794 at 42.423 kb on + strand, within GFF6794 at 42.423 kb on + strand, within GFF6794 at 42.424 kb on - strand, within GFF6794 at 42.424 kb on - strand, within GFF6794 at 42.424 kb on - strand, within GFF6794 at 42.424 kb on - strand, within GFF6794 at 42.424 kb on - strand, within GFF6794 at 42.424 kb on - strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.426 kb on + strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.427 kb on - strand, within GFF6794 at 42.483 kb on - strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.618 kb on + strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.619 kb on - strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.621 kb on + strand, within GFF6794 at 42.622 kb on - strand, within GFF6794 at 42.622 kb on - strand, within GFF6794 at 42.622 kb on - strand, within GFF6794 at 42.622 kb on - strand, within GFF6794 at 42.622 kb on - strand, within GFF6794 at 42.622 kb on - strand, within GFF6794 at 42.642 kb on + strand, within GFF6794 at 42.643 kb on - strand, within GFF6794 at 42.643 kb on - strand, within GFF6794 at 42.643 kb on - strand, within GFF6794 at 42.643 kb on - strand, within GFF6794 at 42.774 kb on + strand, within GFF6794 at 42.775 kb on - strand, within GFF6794 at 42.775 kb on - strand, within GFF6794 at 42.775 kb on - strand, within GFF6794 at 42.953 kb on + strand, within GFF6794 at 42.953 kb on + strand, within GFF6794 at 42.953 kb on + strand, within GFF6794 at 42.954 kb on - strand, within GFF6794 at 42.954 kb on - strand, within GFF6794 at 43.615 kb on - strand at 43.615 kb on - strand at 43.734 kb on + strand at 43.734 kb on + strand at 43.734 kb on + strand at 43.734 kb on + strand at 43.735 kb on - strand at 43.735 kb on - strand at 43.735 kb on - strand at 43.735 kb on - strand at 43.735 kb on - strand at 43.735 kb on - strand at 43.735 kb on - strand at 43.737 kb on + strand at 43.738 kb on - strand at 43.758 kb on + strand at 43.759 kb on - strand at 43.759 kb on - strand at 43.759 kb on - strand at 43.759 kb on - strand at 43.759 kb on - strand at 43.821 kb on + strand, within GFF6795 at 43.821 kb on + strand, within GFF6795 at 43.821 kb on + strand, within GFF6795 at 43.822 kb on - strand, within GFF6795 at 43.822 kb on - strand, within GFF6795 at 44.070 kb on + strand, within GFF6795 at 44.237 kb on + strand at 44.238 kb on - strand at 44.395 kb on - strand, within GFF6796 at 44.569 kb on + strand, within GFF6796 at 44.569 kb on + strand, within GFF6796 at 44.569 kb on + strand, within GFF6796 at 44.569 kb on + strand, within GFF6796 at 44.569 kb on + strand, within GFF6796 at 44.569 kb on + strand, within GFF6796 at 44.570 kb on - strand, within GFF6796 at 44.570 kb on - strand, within GFF6796 at 44.570 kb on - strand, within GFF6796 at 44.570 kb on - strand, within GFF6796 at 44.570 kb on - strand, within GFF6796 at 44.570 kb on - strand, within GFF6796 at 44.600 kb on - strand, within GFF6796 at 44.712 kb on + strand at 44.712 kb on + strand at 44.712 kb on + strand at 44.713 kb on - strand at 44.713 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 41,446 + GFF6793 0.10 -0.3 41,446 + GFF6793 0.10 +1.0 41,446 + GFF6793 0.10 +0.0 41,446 + GFF6793 0.10 -0.1 41,446 + GFF6793 0.10 -0.4 41,447 - GFF6793 0.10 -0.2 41,447 - GFF6793 0.10 +2.6 41,447 - GFF6793 0.10 -0.3 41,633 - GFF6793 0.45 -0.4 41,633 - GFF6793 0.45 +0.1 41,633 - GFF6793 0.45 -0.4 41,851 + GFF6793 0.85 +0.4 41,852 - GFF6793 0.85 -0.1 41,852 - GFF6793 0.85 -0.1 41,852 - GFF6793 0.85 -1.2 41,852 - GFF6793 0.85 +0.7 41,975 + -2.1 41,975 + -1.0 41,975 + -1.4 41,975 + -0.5 41,975 + +2.6 41,975 + -0.5 41,975 + +0.6 41,975 + -0.4 41,975 + +0.2 41,976 - -0.1 41,976 - -0.0 41,976 - +0.1 41,976 - -0.7 42,027 + -0.5 42,027 + +0.4 42,028 - -0.2 42,028 - -0.0 42,028 - +0.1 42,028 - -0.9 42,028 - -0.3 42,062 + -2.4 42,063 - -0.1 42,079 + +1.4 42,079 + +0.1 42,079 + +0.0 42,079 + +0.5 42,080 - -0.4 42,080 - -1.7 42,080 - -0.7 42,080 - -2.1 42,423 + GFF6794 0.15 -0.9 42,423 + GFF6794 0.15 -0.4 42,423 + GFF6794 0.15 -0.6 42,423 + GFF6794 0.15 +0.2 42,424 - GFF6794 0.15 +0.6 42,424 - GFF6794 0.15 +0.4 42,424 - GFF6794 0.15 -0.9 42,424 - GFF6794 0.15 +0.3 42,424 - GFF6794 0.15 -0.7 42,424 - GFF6794 0.15 -0.7 42,426 + GFF6794 0.15 +0.2 42,426 + GFF6794 0.15 -1.2 42,426 + GFF6794 0.15 -0.6 42,426 + GFF6794 0.15 +0.0 42,426 + GFF6794 0.15 -0.2 42,426 + GFF6794 0.15 -0.4 42,426 + GFF6794 0.15 -0.7 42,426 + GFF6794 0.15 +0.5 42,426 + GFF6794 0.15 +0.7 42,426 + GFF6794 0.15 -1.5 42,426 + GFF6794 0.15 -1.6 42,426 + GFF6794 0.15 +0.1 42,426 + GFF6794 0.15 -0.6 42,426 + GFF6794 0.15 +0.6 42,427 - GFF6794 0.15 -0.7 42,427 - GFF6794 0.15 -0.4 42,427 - GFF6794 0.15 -0.6 42,427 - GFF6794 0.15 -0.0 42,427 - GFF6794 0.15 +0.0 42,427 - GFF6794 0.15 -0.6 42,427 - GFF6794 0.15 -1.6 42,427 - GFF6794 0.15 +3.7 42,427 - GFF6794 0.15 -0.3 42,427 - GFF6794 0.15 -2.3 42,427 - GFF6794 0.15 +0.0 42,427 - GFF6794 0.15 -0.4 42,483 - GFF6794 0.18 +1.6 42,618 + GFF6794 0.27 -0.2 42,618 + GFF6794 0.27 -1.2 42,618 + GFF6794 0.27 -0.2 42,618 + GFF6794 0.27 -0.5 42,618 + GFF6794 0.27 +0.6 42,618 + GFF6794 0.27 -0.8 42,618 + GFF6794 0.27 -0.3 42,618 + GFF6794 0.27 -1.4 42,618 + GFF6794 0.27 -0.6 42,618 + GFF6794 0.27 -0.8 42,618 + GFF6794 0.27 -0.5 42,618 + GFF6794 0.27 -1.1 42,618 + GFF6794 0.27 -0.6 42,618 + GFF6794 0.27 -0.7 42,619 - GFF6794 0.27 +4.6 42,619 - GFF6794 0.27 -1.2 42,619 - GFF6794 0.27 -0.4 42,619 - GFF6794 0.27 -0.4 42,619 - GFF6794 0.27 -0.3 42,619 - GFF6794 0.27 -0.2 42,619 - GFF6794 0.27 +0.2 42,621 + GFF6794 0.27 -1.6 42,621 + GFF6794 0.27 -0.7 42,621 + GFF6794 0.27 +0.4 42,621 + GFF6794 0.27 -0.2 42,621 + GFF6794 0.27 -0.5 42,621 + GFF6794 0.27 -0.6 42,621 + GFF6794 0.27 -2.0 42,621 + GFF6794 0.27 +0.1 42,622 - GFF6794 0.27 -0.3 42,622 - GFF6794 0.27 -0.7 42,622 - GFF6794 0.27 -0.2 42,622 - GFF6794 0.27 -0.8 42,622 - GFF6794 0.27 +0.6 42,622 - GFF6794 0.27 +1.0 42,642 + GFF6794 0.29 -0.0 42,643 - GFF6794 0.29 -0.4 42,643 - GFF6794 0.29 +1.2 42,643 - GFF6794 0.29 +0.3 42,643 - GFF6794 0.29 -1.3 42,774 + GFF6794 0.37 -0.5 42,775 - GFF6794 0.37 +0.3 42,775 - GFF6794 0.37 +0.2 42,775 - GFF6794 0.37 -0.7 42,953 + GFF6794 0.49 +0.6 42,953 + GFF6794 0.49 +0.4 42,953 + GFF6794 0.49 -1.4 42,954 - GFF6794 0.49 -0.7 42,954 - GFF6794 0.49 -0.1 43,615 - -0.1 43,615 - +0.7 43,734 + +0.5 43,734 + -0.2 43,734 + +0.3 43,734 + -0.4 43,735 - +0.8 43,735 - +0.0 43,735 - -0.5 43,735 - -0.4 43,735 - -0.4 43,735 - -0.7 43,735 - -0.1 43,737 + +1.3 43,738 - -0.4 43,758 + +0.2 43,759 - -1.0 43,759 - -1.4 43,759 - -0.9 43,759 - -2.3 43,759 - -0.2 43,821 + GFF6795 0.17 -0.7 43,821 + GFF6795 0.17 -0.9 43,821 + GFF6795 0.17 +1.6 43,822 - GFF6795 0.18 +0.0 43,822 - GFF6795 0.18 +0.4 44,070 + GFF6795 0.68 -0.7 44,237 + +0.4 44,238 - +0.8 44,395 - GFF6796 0.30 -0.1 44,569 + GFF6796 0.64 -0.3 44,569 + GFF6796 0.64 +0.3 44,569 + GFF6796 0.64 -0.1 44,569 + GFF6796 0.64 +0.4 44,569 + GFF6796 0.64 +0.0 44,569 + GFF6796 0.64 -0.5 44,570 - GFF6796 0.64 +0.2 44,570 - GFF6796 0.64 +1.0 44,570 - GFF6796 0.64 -1.0 44,570 - GFF6796 0.64 +1.9 44,570 - GFF6796 0.64 -0.8 44,570 - GFF6796 0.64 +0.7 44,600 - GFF6796 0.70 -0.2 44,712 + -0.6 44,712 + -0.7 44,712 + +0.2 44,713 - +0.4 44,713 - +0.3
Or see this region's nucleotide sequence