Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF640 and GFF641 are separated by 112 nucleotides GFF641 and GFF642 are separated by 173 nucleotides GFF642 and GFF643 are separated by 28 nucleotides GFF643 and GFF644 are separated by 95 nucleotides
GFF640 - no description, at 691,940 to 692,419
GFF640
GFF641 - no description, at 692,532 to 693,050
GFF641
GFF642 - Membrane protease family protein BA0301, at 693,224 to 694,120
GFF642
GFF643 - no description, at 694,149 to 694,358
GFF643
GFF644 - ABC transporter, substrate-binding protein (cluster 6, sulfate/molybdate/tungstate/phosphate), at 694,454 to 695,275
GFF644
Position (kb) 693
694
695 Strain fitness (log2 ratio) -1
0
1
2
3 at 692.518 kb on - strand at 692.518 kb on - strand at 692.534 kb on - strand at 692.860 kb on + strand, within GFF641 at 693.043 kb on - strand at 693.043 kb on - strand at 693.043 kb on - strand at 693.099 kb on - strand at 693.099 kb on - strand at 693.275 kb on + strand at 693.275 kb on + strand at 693.276 kb on - strand at 693.294 kb on - strand at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.419 kb on + strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.420 kb on - strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.665 kb on + strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.666 kb on - strand, within GFF642 at 693.722 kb on + strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.723 kb on - strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.870 kb on + strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.871 kb on - strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.875 kb on + strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 693.876 kb on - strand, within GFF642 at 694.105 kb on + strand at 694.105 kb on + strand at 694.106 kb on - strand at 694.106 kb on - strand at 694.112 kb on + strand at 694.112 kb on + strand at 694.112 kb on + strand at 694.112 kb on + strand at 694.113 kb on - strand at 694.113 kb on - strand at 694.113 kb on - strand at 694.113 kb on - strand at 694.113 kb on - strand at 694.113 kb on - strand at 694.173 kb on + strand, within GFF643 at 694.173 kb on + strand, within GFF643 at 694.401 kb on + strand at 694.401 kb on + strand at 694.401 kb on + strand at 694.402 kb on - strand at 694.402 kb on - strand at 694.402 kb on - strand at 694.442 kb on + strand at 694.610 kb on + strand, within GFF644 at 694.610 kb on + strand, within GFF644 at 694.667 kb on + strand, within GFF644 at 694.667 kb on + strand, within GFF644 at 694.668 kb on - strand, within GFF644 at 694.668 kb on - strand, within GFF644 at 694.668 kb on - strand, within GFF644 at 694.919 kb on + strand, within GFF644 at 694.920 kb on - strand, within GFF644 at 694.943 kb on + strand, within GFF644 at 694.943 kb on + strand, within GFF644 at 694.943 kb on + strand, within GFF644 at 694.943 kb on + strand, within GFF644 at 694.943 kb on + strand, within GFF644 at 694.944 kb on - strand, within GFF644 at 694.944 kb on - strand, within GFF644 at 694.944 kb on - strand, within GFF644 at 694.944 kb on - strand, within GFF644 at 694.946 kb on + strand, within GFF644 at 694.946 kb on + strand, within GFF644 at 694.946 kb on + strand, within GFF644 at 694.946 kb on + strand, within GFF644 at 694.946 kb on - strand, within GFF644 at 694.947 kb on - strand, within GFF644 at 694.947 kb on - strand, within GFF644 at 694.947 kb on - strand, within GFF644 at 694.947 kb on - strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644 at 695.105 kb on + strand, within GFF644
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 692,518 - +0.8 692,518 - +1.6 692,534 - +0.1 692,860 + GFF641 0.63 -1.1 693,043 - +0.1 693,043 - -0.4 693,043 - -0.7 693,099 - +0.5 693,099 - +0.3 693,275 + +0.0 693,275 + -1.4 693,276 - -1.4 693,294 - -0.6 693,419 + GFF642 0.22 +0.1 693,419 + GFF642 0.22 -0.2 693,419 + GFF642 0.22 -0.4 693,419 + GFF642 0.22 +0.4 693,419 + GFF642 0.22 +1.2 693,419 + GFF642 0.22 +0.2 693,420 - GFF642 0.22 -0.7 693,420 - GFF642 0.22 +0.4 693,420 - GFF642 0.22 +0.6 693,420 - GFF642 0.22 -0.2 693,420 - GFF642 0.22 +0.1 693,420 - GFF642 0.22 -0.8 693,665 + GFF642 0.49 -0.3 693,665 + GFF642 0.49 -0.1 693,665 + GFF642 0.49 +1.0 693,665 + GFF642 0.49 +1.1 693,665 + GFF642 0.49 -0.2 693,666 - GFF642 0.49 +1.1 693,666 - GFF642 0.49 +1.4 693,666 - GFF642 0.49 -0.1 693,666 - GFF642 0.49 +0.8 693,666 - GFF642 0.49 +0.2 693,666 - GFF642 0.49 -0.5 693,722 + GFF642 0.56 +2.4 693,723 - GFF642 0.56 +0.8 693,723 - GFF642 0.56 +0.8 693,723 - GFF642 0.56 +0.7 693,723 - GFF642 0.56 -0.7 693,870 + GFF642 0.72 -0.0 693,870 + GFF642 0.72 -0.5 693,870 + GFF642 0.72 -0.4 693,870 + GFF642 0.72 +0.0 693,870 + GFF642 0.72 -1.0 693,870 + GFF642 0.72 -0.0 693,870 + GFF642 0.72 +0.4 693,870 + GFF642 0.72 -1.4 693,870 + GFF642 0.72 +0.9 693,871 - GFF642 0.72 +0.3 693,871 - GFF642 0.72 +0.2 693,871 - GFF642 0.72 -0.3 693,871 - GFF642 0.72 +0.2 693,871 - GFF642 0.72 +1.6 693,871 - GFF642 0.72 -1.0 693,875 + GFF642 0.73 -0.0 693,875 + GFF642 0.73 +0.0 693,875 + GFF642 0.73 -0.2 693,875 + GFF642 0.73 -0.1 693,875 + GFF642 0.73 +0.2 693,876 - GFF642 0.73 +1.4 693,876 - GFF642 0.73 +0.2 693,876 - GFF642 0.73 +0.3 693,876 - GFF642 0.73 +0.6 693,876 - GFF642 0.73 +0.2 693,876 - GFF642 0.73 -0.5 694,105 + +0.3 694,105 + +2.1 694,106 - -0.3 694,106 - -0.3 694,112 + +1.5 694,112 + +2.8 694,112 + -0.4 694,112 + -0.2 694,113 - -0.0 694,113 - +2.2 694,113 - -0.2 694,113 - -1.3 694,113 - +0.5 694,113 - +1.0 694,173 + GFF643 0.11 -0.5 694,173 + GFF643 0.11 +0.6 694,401 + -0.7 694,401 + -0.1 694,401 + -1.0 694,402 - +0.6 694,402 - +0.6 694,402 - -0.2 694,442 + +0.6 694,610 + GFF644 0.19 +1.2 694,610 + GFF644 0.19 -1.0 694,667 + GFF644 0.26 -0.4 694,667 + GFF644 0.26 -0.0 694,668 - GFF644 0.26 +1.3 694,668 - GFF644 0.26 +0.2 694,668 - GFF644 0.26 -0.5 694,919 + GFF644 0.57 +0.1 694,920 - GFF644 0.57 +0.5 694,943 + GFF644 0.59 -0.6 694,943 + GFF644 0.59 +0.0 694,943 + GFF644 0.59 -0.5 694,943 + GFF644 0.59 +1.2 694,943 + GFF644 0.59 +0.4 694,944 - GFF644 0.60 -0.0 694,944 - GFF644 0.60 +0.9 694,944 - GFF644 0.60 -0.9 694,944 - GFF644 0.60 +0.6 694,946 + GFF644 0.60 -0.6 694,946 + GFF644 0.60 -1.4 694,946 + GFF644 0.60 +0.1 694,946 + GFF644 0.60 +1.2 694,946 - GFF644 0.60 -0.4 694,947 - GFF644 0.60 -0.5 694,947 - GFF644 0.60 -0.7 694,947 - GFF644 0.60 +0.8 694,947 - GFF644 0.60 +0.5 695,105 + GFF644 0.79 +0.6 695,105 + GFF644 0.79 -0.4 695,105 + GFF644 0.79 -0.1 695,105 + GFF644 0.79 +0.8 695,105 + GFF644 0.79 -0.1 695,105 + GFF644 0.79 -0.3 695,105 + GFF644 0.79 +0.8 695,105 + GFF644 0.79 -0.4
Or see this region's nucleotide sequence