Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2693 and GFF2694 overlap by 4 nucleotides GFF2694 and GFF2695 are separated by 28 nucleotides
GFF2692 - hypothetical protein, at 120,931 to 121,506
GFF2692
GFF2693 - no description, at 121,478 to 122,485
GFF2693
GFF2694 - hypothetical protein, at 122,482 to 123,504
GFF2694
GFF2695 - no description, at 123,533 to 124,543
GFF2695
Position (kb) 122
123
124 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 121.636 kb on - strand, within GFF2693 at 121.636 kb on - strand, within GFF2693 at 121.665 kb on + strand, within GFF2693 at 121.665 kb on + strand, within GFF2693 at 121.734 kb on + strand, within GFF2693 at 121.734 kb on + strand, within GFF2693 at 121.734 kb on + strand, within GFF2693 at 121.735 kb on - strand, within GFF2693 at 121.735 kb on - strand, within GFF2693 at 121.896 kb on + strand, within GFF2693 at 121.897 kb on - strand, within GFF2693 at 122.304 kb on + strand, within GFF2693 at 122.304 kb on + strand, within GFF2693 at 122.305 kb on - strand, within GFF2693 at 122.583 kb on - strand at 122.753 kb on + strand, within GFF2694 at 122.754 kb on - strand, within GFF2694 at 122.832 kb on - strand, within GFF2694 at 123.206 kb on + strand, within GFF2694 at 123.206 kb on + strand, within GFF2694 at 123.206 kb on + strand, within GFF2694 at 123.206 kb on + strand, within GFF2694 at 123.207 kb on - strand, within GFF2694 at 123.207 kb on - strand, within GFF2694 at 123.207 kb on - strand, within GFF2694 at 123.207 kb on - strand, within GFF2694 at 123.505 kb on - strand at 123.633 kb on - strand at 123.758 kb on + strand, within GFF2695 at 123.758 kb on + strand, within GFF2695 at 123.759 kb on - strand, within GFF2695 at 123.821 kb on + strand, within GFF2695 at 123.822 kb on - strand, within GFF2695 at 124.016 kb on + strand, within GFF2695 at 124.016 kb on + strand, within GFF2695 at 124.019 kb on + strand, within GFF2695 at 124.094 kb on + strand, within GFF2695 at 124.094 kb on + strand, within GFF2695 at 124.095 kb on - strand, within GFF2695 at 124.115 kb on + strand, within GFF2695 at 124.115 kb on + strand, within GFF2695 at 124.116 kb on - strand, within GFF2695
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 121,636 - GFF2693 0.16 -0.1 121,636 - GFF2693 0.16 +0.3 121,665 + GFF2693 0.19 +0.8 121,665 + GFF2693 0.19 -0.1 121,734 + GFF2693 0.25 -0.4 121,734 + GFF2693 0.25 -0.7 121,734 + GFF2693 0.25 -0.3 121,735 - GFF2693 0.25 -1.3 121,735 - GFF2693 0.25 +0.4 121,896 + GFF2693 0.41 +0.5 121,897 - GFF2693 0.42 -0.1 122,304 + GFF2693 0.82 +1.5 122,304 + GFF2693 0.82 +2.5 122,305 - GFF2693 0.82 +0.0 122,583 - -1.0 122,753 + GFF2694 0.26 -0.3 122,754 - GFF2694 0.27 -1.0 122,832 - GFF2694 0.34 +0.2 123,206 + GFF2694 0.71 -0.9 123,206 + GFF2694 0.71 +0.4 123,206 + GFF2694 0.71 -0.6 123,206 + GFF2694 0.71 +1.9 123,207 - GFF2694 0.71 -0.0 123,207 - GFF2694 0.71 -0.5 123,207 - GFF2694 0.71 -0.7 123,207 - GFF2694 0.71 -0.1 123,505 - -0.5 123,633 - -0.9 123,758 + GFF2695 0.22 -0.6 123,758 + GFF2695 0.22 +0.2 123,759 - GFF2695 0.22 -0.1 123,821 + GFF2695 0.28 +0.5 123,822 - GFF2695 0.29 +0.4 124,016 + GFF2695 0.48 -2.0 124,016 + GFF2695 0.48 -0.2 124,019 + GFF2695 0.48 -0.6 124,094 + GFF2695 0.55 -0.4 124,094 + GFF2695 0.55 -1.3 124,095 - GFF2695 0.56 +2.9 124,115 + GFF2695 0.58 -0.5 124,115 + GFF2695 0.58 +0.0 124,116 - GFF2695 0.58 -1.9
Or see this region's nucleotide sequence