Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1146 and GFF1147 are separated by 255 nucleotides GFF1147 and GFF1148 are separated by 54 nucleotides GFF1148 and GFF1149 are separated by 74 nucleotides
GFF1146 - Pyrophosphate-energized proton pump (EC 3.6.1.1), at 462,119 to 464,635
GFF1146
GFF1147 - Inorganic pyrophosphatase (EC 3.6.1.1), at 464,891 to 465,418
GFF1147
GFF1148 - hypothetical protein, at 465,473 to 466,225
GFF1148
GFF1149 - FIG110192: hypothetical protein, at 466,300 to 467,454
GFF1149
Position (kb) 465
466
467 Strain fitness (log2 ratio) -2
-1
0
1
2 at 464.481 kb on + strand at 464.481 kb on + strand at 464.481 kb on + strand at 464.482 kb on - strand at 464.613 kb on - strand at 464.613 kb on - strand at 464.613 kb on - strand at 464.613 kb on - strand at 464.613 kb on - strand at 464.665 kb on + strand at 464.665 kb on + strand at 464.705 kb on - strand at 464.705 kb on - strand at 464.705 kb on - strand at 464.717 kb on + strand at 464.835 kb on + strand at 464.835 kb on + strand at 464.836 kb on - strand at 464.836 kb on - strand at 464.865 kb on + strand at 464.865 kb on + strand at 464.876 kb on + strand at 465.416 kb on + strand at 465.416 kb on + strand at 465.416 kb on + strand at 465.416 kb on + strand at 465.416 kb on + strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.417 kb on - strand at 465.430 kb on + strand at 465.619 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.621 kb on + strand, within GFF1148 at 465.622 kb on - strand, within GFF1148 at 465.622 kb on - strand, within GFF1148 at 465.622 kb on - strand, within GFF1148 at 465.622 kb on - strand, within GFF1148 at 465.648 kb on + strand, within GFF1148 at 465.648 kb on + strand, within GFF1148 at 465.648 kb on + strand, within GFF1148 at 465.649 kb on - strand, within GFF1148 at 465.747 kb on + strand, within GFF1148 at 465.978 kb on + strand, within GFF1148 at 465.978 kb on + strand, within GFF1148 at 465.978 kb on + strand, within GFF1148 at 465.978 kb on + strand, within GFF1148 at 465.978 kb on + strand, within GFF1148 at 465.978 kb on + strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 465.979 kb on - strand, within GFF1148 at 466.000 kb on - strand, within GFF1148 at 466.080 kb on + strand, within GFF1148 at 466.080 kb on + strand, within GFF1148 at 466.081 kb on - strand, within GFF1148 at 466.081 kb on - strand, within GFF1148 at 466.081 kb on - strand, within GFF1148 at 466.081 kb on - strand, within GFF1148 at 466.081 kb on - strand, within GFF1148 at 466.081 kb on - strand, within GFF1148 at 466.095 kb on + strand, within GFF1148 at 466.095 kb on + strand, within GFF1148 at 466.096 kb on - strand, within GFF1148 at 466.096 kb on - strand, within GFF1148 at 466.132 kb on + strand, within GFF1148 at 466.132 kb on + strand, within GFF1148 at 466.133 kb on - strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.143 kb on + strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.144 kb on - strand, within GFF1148 at 466.266 kb on + strand at 466.266 kb on + strand at 466.267 kb on - strand at 466.267 kb on - strand at 466.267 kb on - strand at 466.267 kb on - strand at 466.267 kb on - strand at 466.268 kb on + strand at 466.269 kb on - strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.343 kb on + strand at 466.344 kb on - strand at 466.344 kb on - strand at 466.344 kb on - strand at 466.344 kb on - strand at 466.344 kb on - strand at 466.344 kb on - strand at 466.529 kb on + strand, within GFF1149 at 466.529 kb on + strand, within GFF1149 at 466.529 kb on + strand, within GFF1149 at 466.529 kb on + strand, within GFF1149 at 466.530 kb on - strand, within GFF1149 at 466.530 kb on - strand, within GFF1149 at 466.530 kb on - strand, within GFF1149 at 466.530 kb on - strand, within GFF1149 at 466.532 kb on + strand, within GFF1149 at 466.532 kb on + strand, within GFF1149 at 466.532 kb on + strand, within GFF1149 at 466.532 kb on + strand, within GFF1149 at 466.532 kb on + strand, within GFF1149 at 466.532 kb on + strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.533 kb on - strand, within GFF1149 at 466.589 kb on + strand, within GFF1149 at 466.589 kb on + strand, within GFF1149 at 466.589 kb on + strand, within GFF1149 at 466.590 kb on - strand, within GFF1149 at 466.590 kb on - strand, within GFF1149 at 466.590 kb on - strand, within GFF1149 at 466.731 kb on - strand, within GFF1149 at 466.731 kb on - strand, within GFF1149 at 466.731 kb on - strand, within GFF1149 at 466.754 kb on + strand, within GFF1149 at 466.754 kb on + strand, within GFF1149 at 466.754 kb on + strand, within GFF1149 at 466.754 kb on + strand, within GFF1149 at 466.766 kb on + strand, within GFF1149 at 466.767 kb on - strand, within GFF1149 at 466.767 kb on - strand, within GFF1149 at 466.767 kb on - strand, within GFF1149 at 466.767 kb on - strand, within GFF1149 at 466.922 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.953 kb on + strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 466.954 kb on - strand, within GFF1149 at 467.153 kb on + strand, within GFF1149 at 467.153 kb on + strand, within GFF1149 at 467.153 kb on + strand, within GFF1149 at 467.154 kb on - strand, within GFF1149 at 467.156 kb on + strand, within GFF1149 at 467.156 kb on + strand, within GFF1149 at 467.156 kb on + strand, within GFF1149 at 467.156 kb on + strand, within GFF1149 at 467.156 kb on + strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.157 kb on - strand, within GFF1149 at 467.177 kb on + strand, within GFF1149 at 467.177 kb on + strand, within GFF1149 at 467.177 kb on + strand, within GFF1149 at 467.177 kb on + strand, within GFF1149 at 467.177 kb on + strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.178 kb on - strand, within GFF1149 at 467.208 kb on - strand, within GFF1149 at 467.208 kb on - strand, within GFF1149 at 467.208 kb on - strand, within GFF1149 at 467.208 kb on - strand, within GFF1149 at 467.217 kb on - strand, within GFF1149
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 464,481 + +0.1 464,481 + +0.1 464,481 + -0.6 464,482 - -0.8 464,613 - -0.0 464,613 - -0.7 464,613 - +0.1 464,613 - -0.4 464,613 - +1.1 464,665 + -0.7 464,665 + -0.8 464,705 - -0.7 464,705 - -0.4 464,705 - -0.1 464,717 + +0.2 464,835 + -0.1 464,835 + +1.5 464,836 - -0.5 464,836 - +0.2 464,865 + -0.9 464,865 + +1.7 464,876 + -0.7 465,416 + +0.4 465,416 + +0.1 465,416 + +0.8 465,416 + -0.8 465,416 + -0.0 465,417 - -0.2 465,417 - -1.3 465,417 - +0.2 465,417 - +1.7 465,417 - -1.0 465,417 - -1.9 465,417 - -0.2 465,417 - +0.1 465,417 - +0.3 465,417 - -0.9 465,417 - -1.0 465,430 + -0.0 465,619 + GFF1148 0.19 -0.8 465,621 + GFF1148 0.20 -0.7 465,621 + GFF1148 0.20 -0.6 465,621 + GFF1148 0.20 -0.8 465,621 + GFF1148 0.20 -0.5 465,621 + GFF1148 0.20 -0.9 465,621 + GFF1148 0.20 +0.1 465,621 + GFF1148 0.20 -0.1 465,622 - GFF1148 0.20 -0.0 465,622 - GFF1148 0.20 -2.5 465,622 - GFF1148 0.20 +0.9 465,622 - GFF1148 0.20 -0.5 465,648 + GFF1148 0.23 +0.0 465,648 + GFF1148 0.23 -1.2 465,648 + GFF1148 0.23 -0.4 465,649 - GFF1148 0.23 -0.7 465,747 + GFF1148 0.36 -1.1 465,978 + GFF1148 0.67 -0.1 465,978 + GFF1148 0.67 -0.2 465,978 + GFF1148 0.67 -0.4 465,978 + GFF1148 0.67 -0.1 465,978 + GFF1148 0.67 -2.1 465,978 + GFF1148 0.67 -0.2 465,979 - GFF1148 0.67 -1.1 465,979 - GFF1148 0.67 -0.6 465,979 - GFF1148 0.67 +0.3 465,979 - GFF1148 0.67 +0.1 465,979 - GFF1148 0.67 +0.5 465,979 - GFF1148 0.67 -0.2 465,979 - GFF1148 0.67 -2.5 465,979 - GFF1148 0.67 -0.0 465,979 - GFF1148 0.67 +0.4 466,000 - GFF1148 0.70 -0.1 466,080 + GFF1148 0.81 +0.1 466,080 + GFF1148 0.81 -0.3 466,081 - GFF1148 0.81 -0.3 466,081 - GFF1148 0.81 -1.0 466,081 - GFF1148 0.81 -1.1 466,081 - GFF1148 0.81 +1.7 466,081 - GFF1148 0.81 +0.3 466,081 - GFF1148 0.81 -1.4 466,095 + GFF1148 0.83 -0.3 466,095 + GFF1148 0.83 -0.3 466,096 - GFF1148 0.83 -0.0 466,096 - GFF1148 0.83 -0.1 466,132 + GFF1148 0.88 -0.1 466,132 + GFF1148 0.88 -1.0 466,133 - GFF1148 0.88 +0.1 466,143 + GFF1148 0.89 -0.6 466,143 + GFF1148 0.89 -1.1 466,143 + GFF1148 0.89 -0.2 466,143 + GFF1148 0.89 +0.1 466,143 + GFF1148 0.89 -0.3 466,143 + GFF1148 0.89 -1.0 466,143 + GFF1148 0.89 +0.7 466,143 + GFF1148 0.89 -0.3 466,143 + GFF1148 0.89 +1.1 466,143 + GFF1148 0.89 -1.7 466,144 - GFF1148 0.89 -1.3 466,144 - GFF1148 0.89 -0.4 466,144 - GFF1148 0.89 +0.4 466,144 - GFF1148 0.89 -0.0 466,144 - GFF1148 0.89 -0.7 466,144 - GFF1148 0.89 -0.1 466,144 - GFF1148 0.89 -0.1 466,144 - GFF1148 0.89 +1.7 466,144 - GFF1148 0.89 -0.7 466,144 - GFF1148 0.89 +0.5 466,144 - GFF1148 0.89 -0.5 466,144 - GFF1148 0.89 +0.5 466,144 - GFF1148 0.89 -0.3 466,144 - GFF1148 0.89 +0.3 466,144 - GFF1148 0.89 -0.5 466,144 - GFF1148 0.89 -1.0 466,266 + -0.9 466,266 + -0.4 466,267 - -0.6 466,267 - +1.4 466,267 - -0.4 466,267 - +1.1 466,267 - -1.1 466,268 + +1.7 466,269 - +1.2 466,343 + -0.5 466,343 + -0.7 466,343 + -0.3 466,343 + +0.1 466,343 + +1.1 466,343 + -0.6 466,343 + -0.2 466,343 + -0.6 466,343 + +0.6 466,343 + +0.6 466,343 + -1.7 466,343 + -0.6 466,343 + -0.4 466,343 + -0.1 466,343 + -0.3 466,343 + +0.7 466,344 - -0.8 466,344 - -0.7 466,344 - -0.4 466,344 - +0.0 466,344 - -0.2 466,344 - +0.5 466,529 + GFF1149 0.20 +0.0 466,529 + GFF1149 0.20 -0.1 466,529 + GFF1149 0.20 -0.0 466,529 + GFF1149 0.20 -0.3 466,530 - GFF1149 0.20 +0.1 466,530 - GFF1149 0.20 -1.7 466,530 - GFF1149 0.20 +1.3 466,530 - GFF1149 0.20 +2.7 466,532 + GFF1149 0.20 -0.8 466,532 + GFF1149 0.20 +0.1 466,532 + GFF1149 0.20 +0.2 466,532 + GFF1149 0.20 -0.3 466,532 + GFF1149 0.20 +1.1 466,532 + GFF1149 0.20 -0.2 466,533 - GFF1149 0.20 +0.1 466,533 - GFF1149 0.20 +0.0 466,533 - GFF1149 0.20 -0.8 466,533 - GFF1149 0.20 -0.9 466,533 - GFF1149 0.20 +0.7 466,533 - GFF1149 0.20 -0.5 466,533 - GFF1149 0.20 +0.1 466,533 - GFF1149 0.20 +0.5 466,533 - GFF1149 0.20 +0.7 466,589 + GFF1149 0.25 -0.6 466,589 + GFF1149 0.25 -0.1 466,589 + GFF1149 0.25 +0.8 466,590 - GFF1149 0.25 -0.7 466,590 - GFF1149 0.25 -0.1 466,590 - GFF1149 0.25 -1.0 466,731 - GFF1149 0.37 -0.6 466,731 - GFF1149 0.37 +1.2 466,731 - GFF1149 0.37 -0.6 466,754 + GFF1149 0.39 -0.9 466,754 + GFF1149 0.39 +0.4 466,754 + GFF1149 0.39 -0.6 466,754 + GFF1149 0.39 -0.7 466,766 + GFF1149 0.40 -1.1 466,767 - GFF1149 0.40 +0.1 466,767 - GFF1149 0.40 -0.3 466,767 - GFF1149 0.40 -0.7 466,767 - GFF1149 0.40 -0.0 466,922 + GFF1149 0.54 +1.0 466,953 + GFF1149 0.57 +0.0 466,953 + GFF1149 0.57 -0.1 466,953 + GFF1149 0.57 -0.5 466,953 + GFF1149 0.57 -0.8 466,953 + GFF1149 0.57 +1.2 466,953 + GFF1149 0.57 -1.0 466,953 + GFF1149 0.57 -0.9 466,953 + GFF1149 0.57 +0.1 466,953 + GFF1149 0.57 -2.1 466,953 + GFF1149 0.57 -1.0 466,953 + GFF1149 0.57 -0.0 466,954 - GFF1149 0.57 -0.9 466,954 - GFF1149 0.57 +0.7 466,954 - GFF1149 0.57 -1.2 466,954 - GFF1149 0.57 -0.4 466,954 - GFF1149 0.57 +1.7 466,954 - GFF1149 0.57 +0.3 466,954 - GFF1149 0.57 +0.1 466,954 - GFF1149 0.57 -0.3 466,954 - GFF1149 0.57 +0.4 466,954 - GFF1149 0.57 -0.6 466,954 - GFF1149 0.57 +0.7 466,954 - GFF1149 0.57 +0.8 466,954 - GFF1149 0.57 -1.2 466,954 - GFF1149 0.57 -0.8 466,954 - GFF1149 0.57 -0.3 467,153 + GFF1149 0.74 +0.6 467,153 + GFF1149 0.74 -0.9 467,153 + GFF1149 0.74 -0.2 467,154 - GFF1149 0.74 -0.0 467,156 + GFF1149 0.74 +1.7 467,156 + GFF1149 0.74 -1.1 467,156 + GFF1149 0.74 -0.9 467,156 + GFF1149 0.74 -1.4 467,156 + GFF1149 0.74 +0.1 467,157 - GFF1149 0.74 +1.4 467,157 - GFF1149 0.74 -0.3 467,157 - GFF1149 0.74 -0.2 467,157 - GFF1149 0.74 -1.6 467,157 - GFF1149 0.74 -0.0 467,157 - GFF1149 0.74 -0.6 467,157 - GFF1149 0.74 +0.7 467,177 + GFF1149 0.76 -0.7 467,177 + GFF1149 0.76 -1.3 467,177 + GFF1149 0.76 -0.5 467,177 + GFF1149 0.76 +1.1 467,177 + GFF1149 0.76 -0.6 467,178 - GFF1149 0.76 -0.2 467,178 - GFF1149 0.76 -0.3 467,178 - GFF1149 0.76 -0.3 467,178 - GFF1149 0.76 -1.3 467,178 - GFF1149 0.76 -0.4 467,178 - GFF1149 0.76 -1.7 467,178 - GFF1149 0.76 +0.9 467,208 - GFF1149 0.79 -1.2 467,208 - GFF1149 0.79 +0.7 467,208 - GFF1149 0.79 -1.7 467,208 - GFF1149 0.79 +0.5 467,217 - GFF1149 0.79 -0.3
Or see this region's nucleotide sequence