Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5968 and GFF5969 are separated by 347 nucleotides GFF5969 and GFF5970 overlap by 4 nucleotides
GFF5968 - no description, at 22,824 to 23,717
GFF5968
GFF5969 - Transcriptional regulator, GntR family, at 24,065 to 24,745
GFF5969
GFF5970 - Uncharacterized MFS-type transporter, at 24,742 to 26,058
GFF5970
Position (kb) 24
25 Strain fitness (log2 ratio) -1
0
1
2 at 23.200 kb on + strand, within GFF5968 at 23.200 kb on + strand, within GFF5968 at 23.201 kb on - strand, within GFF5968 at 23.201 kb on - strand, within GFF5968 at 23.201 kb on - strand, within GFF5968 at 23.407 kb on + strand, within GFF5968 at 23.407 kb on + strand, within GFF5968 at 23.410 kb on + strand, within GFF5968 at 23.410 kb on + strand, within GFF5968 at 23.410 kb on + strand, within GFF5968 at 23.410 kb on + strand, within GFF5968 at 23.410 kb on + strand, within GFF5968 at 23.411 kb on - strand, within GFF5968 at 23.411 kb on - strand, within GFF5968 at 23.411 kb on - strand, within GFF5968 at 23.411 kb on - strand, within GFF5968 at 23.411 kb on - strand, within GFF5968 at 23.411 kb on - strand, within GFF5968 at 23.628 kb on + strand at 23.628 kb on + strand at 23.628 kb on + strand at 23.628 kb on + strand at 23.628 kb on + strand at 23.628 kb on + strand at 23.629 kb on - strand at 23.629 kb on - strand at 23.629 kb on - strand at 23.629 kb on - strand at 23.821 kb on + strand at 23.821 kb on + strand at 23.832 kb on + strand at 23.867 kb on - strand at 24.052 kb on + strand at 24.052 kb on + strand at 24.052 kb on + strand at 24.053 kb on - strand at 24.053 kb on - strand at 24.053 kb on - strand at 24.053 kb on - strand at 24.053 kb on - strand at 24.053 kb on - strand at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.278 kb on + strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.279 kb on - strand, within GFF5969 at 24.510 kb on + strand, within GFF5969 at 24.510 kb on + strand, within GFF5969 at 24.510 kb on + strand, within GFF5969 at 24.510 kb on + strand, within GFF5969 at 24.525 kb on + strand, within GFF5969 at 24.525 kb on + strand, within GFF5969 at 24.526 kb on - strand, within GFF5969 at 24.526 kb on - strand, within GFF5969 at 24.526 kb on - strand, within GFF5969 at 24.572 kb on + strand, within GFF5969 at 24.572 kb on + strand, within GFF5969 at 24.572 kb on + strand, within GFF5969 at 24.573 kb on - strand, within GFF5969 at 24.573 kb on - strand, within GFF5969 at 24.573 kb on - strand, within GFF5969 at 24.783 kb on + strand at 24.783 kb on + strand at 24.783 kb on + strand at 24.784 kb on - strand at 24.784 kb on - strand at 24.784 kb on - strand at 24.784 kb on - strand at 24.784 kb on - strand at 24.784 kb on - strand at 24.784 kb on - strand at 24.963 kb on - strand, within GFF5970 at 25.273 kb on + strand, within GFF5970 at 25.273 kb on + strand, within GFF5970 at 25.273 kb on + strand, within GFF5970 at 25.273 kb on + strand, within GFF5970 at 25.273 kb on + strand, within GFF5970 at 25.274 kb on - strand, within GFF5970 at 25.274 kb on - strand, within GFF5970 at 25.274 kb on - strand, within GFF5970 at 25.274 kb on - strand, within GFF5970 at 25.318 kb on - strand, within GFF5970 at 25.531 kb on + strand, within GFF5970 at 25.531 kb on + strand, within GFF5970 at 25.532 kb on - strand, within GFF5970 at 25.532 kb on - strand, within GFF5970 at 25.532 kb on - strand, within GFF5970 at 25.532 kb on - strand, within GFF5970 at 25.597 kb on + strand, within GFF5970 at 25.597 kb on + strand, within GFF5970 at 25.598 kb on - strand, within GFF5970 at 25.598 kb on - strand, within GFF5970 at 25.598 kb on - strand, within GFF5970
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 23,200 + GFF5968 0.42 -0.3 23,200 + GFF5968 0.42 +1.1 23,201 - GFF5968 0.42 -0.6 23,201 - GFF5968 0.42 -0.3 23,201 - GFF5968 0.42 +0.3 23,407 + GFF5968 0.65 +0.3 23,407 + GFF5968 0.65 +1.3 23,410 + GFF5968 0.66 -0.2 23,410 + GFF5968 0.66 -0.1 23,410 + GFF5968 0.66 +0.9 23,410 + GFF5968 0.66 -0.0 23,410 + GFF5968 0.66 +0.5 23,411 - GFF5968 0.66 +1.9 23,411 - GFF5968 0.66 -0.1 23,411 - GFF5968 0.66 -1.3 23,411 - GFF5968 0.66 -0.4 23,411 - GFF5968 0.66 +0.5 23,411 - GFF5968 0.66 +0.7 23,628 + -0.0 23,628 + +0.9 23,628 + +0.1 23,628 + -1.0 23,628 + -0.2 23,628 + +0.2 23,629 - -0.8 23,629 - +0.0 23,629 - -0.9 23,629 - +0.6 23,821 + -0.1 23,821 + -0.4 23,832 + +0.5 23,867 - -0.1 24,052 + -0.5 24,052 + -0.6 24,052 + +1.0 24,053 - -0.2 24,053 - +1.1 24,053 - +1.9 24,053 - -0.3 24,053 - +0.3 24,053 - -0.4 24,278 + GFF5969 0.31 +0.4 24,278 + GFF5969 0.31 -0.8 24,278 + GFF5969 0.31 +1.1 24,278 + GFF5969 0.31 +0.1 24,278 + GFF5969 0.31 +0.3 24,278 + GFF5969 0.31 +0.4 24,278 + GFF5969 0.31 +0.1 24,278 + GFF5969 0.31 -0.1 24,278 + GFF5969 0.31 -1.3 24,278 + GFF5969 0.31 +0.2 24,278 + GFF5969 0.31 -1.0 24,278 + GFF5969 0.31 -1.1 24,278 + GFF5969 0.31 +0.2 24,279 - GFF5969 0.31 +0.1 24,279 - GFF5969 0.31 +0.5 24,279 - GFF5969 0.31 +0.0 24,279 - GFF5969 0.31 -0.1 24,279 - GFF5969 0.31 +0.2 24,279 - GFF5969 0.31 -1.6 24,279 - GFF5969 0.31 -0.9 24,279 - GFF5969 0.31 +0.5 24,279 - GFF5969 0.31 -0.3 24,279 - GFF5969 0.31 +0.6 24,279 - GFF5969 0.31 +0.4 24,279 - GFF5969 0.31 +1.2 24,279 - GFF5969 0.31 -0.1 24,279 - GFF5969 0.31 -1.1 24,279 - GFF5969 0.31 -0.9 24,279 - GFF5969 0.31 +0.1 24,279 - GFF5969 0.31 -0.4 24,279 - GFF5969 0.31 +1.4 24,279 - GFF5969 0.31 -1.5 24,279 - GFF5969 0.31 +0.1 24,510 + GFF5969 0.65 +0.5 24,510 + GFF5969 0.65 -0.1 24,510 + GFF5969 0.65 -0.7 24,510 + GFF5969 0.65 +0.5 24,525 + GFF5969 0.68 +0.9 24,525 + GFF5969 0.68 +0.2 24,526 - GFF5969 0.68 -0.5 24,526 - GFF5969 0.68 -1.5 24,526 - GFF5969 0.68 +0.1 24,572 + GFF5969 0.74 +0.3 24,572 + GFF5969 0.74 -0.0 24,572 + GFF5969 0.74 +0.5 24,573 - GFF5969 0.75 +1.2 24,573 - GFF5969 0.75 -0.2 24,573 - GFF5969 0.75 +0.6 24,783 + +0.1 24,783 + -0.5 24,783 + +0.5 24,784 - -0.9 24,784 - +0.4 24,784 - +0.5 24,784 - -0.8 24,784 - -0.6 24,784 - +0.1 24,784 - +0.5 24,963 - GFF5970 0.17 +0.6 25,273 + GFF5970 0.40 +0.2 25,273 + GFF5970 0.40 +0.2 25,273 + GFF5970 0.40 -0.2 25,273 + GFF5970 0.40 +0.3 25,273 + GFF5970 0.40 +0.1 25,274 - GFF5970 0.40 -1.5 25,274 - GFF5970 0.40 -0.3 25,274 - GFF5970 0.40 +0.1 25,274 - GFF5970 0.40 -0.2 25,318 - GFF5970 0.44 -0.3 25,531 + GFF5970 0.60 -0.7 25,531 + GFF5970 0.60 -0.5 25,532 - GFF5970 0.60 +0.1 25,532 - GFF5970 0.60 -0.7 25,532 - GFF5970 0.60 -0.5 25,532 - GFF5970 0.60 -0.5 25,597 + GFF5970 0.65 +0.4 25,597 + GFF5970 0.65 +0.1 25,598 - GFF5970 0.65 +0.3 25,598 - GFF5970 0.65 -0.3 25,598 - GFF5970 0.65 -0.7
Or see this region's nucleotide sequence