Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5720 and GFF5721 overlap by 1 nucleotides GFF5721 and GFF5722 are separated by 2 nucleotides GFF5722 and GFF5723 are separated by 10 nucleotides
GFF5720 - Flagellar basal-body rod protein FlgG, at 89,631 to 90,413
GFF5720
GFF5721 - Flagellar L-ring protein FlgH, at 90,413 to 91,120
GFF5721
GFF5722 - Flagellar P-ring protein FlgI, at 91,123 to 92,331
GFF5722
GFF5723 - Flagellar protein FlgJ [peptidoglycan hydrolase], at 92,342 to 93,358
GFF5723
Position (kb) 91
92
93 Strain fitness (log2 ratio) -1
0
1 at 90.361 kb on - strand at 90.951 kb on - strand, within GFF5721 at 90.951 kb on - strand, within GFF5721 at 90.951 kb on - strand, within GFF5721 at 91.041 kb on - strand, within GFF5721 at 91.055 kb on + strand at 91.640 kb on - strand, within GFF5722 at 91.640 kb on - strand, within GFF5722 at 92.604 kb on - strand, within GFF5723 at 92.858 kb on + strand, within GFF5723 at 92.858 kb on + strand, within GFF5723 at 92.859 kb on - strand, within GFF5723 at 92.859 kb on - strand, within GFF5723 at 92.864 kb on + strand, within GFF5723 at 93.131 kb on + strand, within GFF5723 at 93.132 kb on - strand, within GFF5723 at 93.132 kb on - strand, within GFF5723 at 93.177 kb on - strand, within GFF5723 at 93.185 kb on + strand, within GFF5723 at 93.186 kb on - strand, within GFF5723 at 93.300 kb on - strand at 93.317 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 90,361 - -1.1 90,951 - GFF5721 0.76 -0.8 90,951 - GFF5721 0.76 -0.1 90,951 - GFF5721 0.76 +0.7 91,041 - GFF5721 0.89 -1.5 91,055 + -0.2 91,640 - GFF5722 0.43 +0.2 91,640 - GFF5722 0.43 +0.3 92,604 - GFF5723 0.26 +0.0 92,858 + GFF5723 0.51 -0.7 92,858 + GFF5723 0.51 -0.1 92,859 - GFF5723 0.51 -0.4 92,859 - GFF5723 0.51 +1.0 92,864 + GFF5723 0.51 +1.4 93,131 + GFF5723 0.78 -0.6 93,132 - GFF5723 0.78 -1.2 93,132 - GFF5723 0.78 -0.4 93,177 - GFF5723 0.82 +0.2 93,185 + GFF5723 0.83 +0.0 93,186 - GFF5723 0.83 -0.3 93,300 - -0.4 93,317 + +0.0
Or see this region's nucleotide sequence