Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5444 and GFF5445 overlap by 4 nucleotides GFF5445 and GFF5446 are separated by 2 nucleotides
GFF5444 - FIG005080: Possible exported protein, at 70,792 to 75,009
GFF5444
GFF5445 - FIG003879: Uncharacterized subgroup of the nitrilase superfamily, at 75,006 to 75,821
GFF5445
GFF5446 - Two-component system sensor histidine kinase/response regulator hybrid, at 75,824 to 77,878
GFF5446
Position (kb) 75
76 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 74.014 kb on + strand, within GFF5444 at 74.014 kb on + strand, within GFF5444 at 74.898 kb on - strand at 75.126 kb on + strand, within GFF5445 at 75.126 kb on + strand, within GFF5445 at 75.126 kb on + strand, within GFF5445 at 75.126 kb on + strand, within GFF5445 at 75.127 kb on - strand, within GFF5445 at 75.127 kb on - strand, within GFF5445 at 75.336 kb on + strand, within GFF5445 at 75.381 kb on + strand, within GFF5445 at 75.382 kb on - strand, within GFF5445 at 75.382 kb on - strand, within GFF5445 at 75.480 kb on + strand, within GFF5445 at 75.480 kb on + strand, within GFF5445 at 75.480 kb on + strand, within GFF5445 at 75.480 kb on + strand, within GFF5445 at 75.480 kb on + strand, within GFF5445 at 75.481 kb on - strand, within GFF5445 at 75.481 kb on - strand, within GFF5445 at 75.481 kb on - strand, within GFF5445 at 75.481 kb on - strand, within GFF5445 at 75.481 kb on - strand, within GFF5445 at 75.504 kb on + strand, within GFF5445 at 75.566 kb on + strand, within GFF5445 at 75.567 kb on - strand, within GFF5445 at 75.819 kb on + strand at 75.820 kb on - strand at 75.820 kb on - strand at 75.820 kb on - strand at 75.820 kb on - strand at 76.307 kb on + strand, within GFF5446 at 76.307 kb on + strand, within GFF5446 at 76.308 kb on - strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.322 kb on + strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.323 kb on - strand, within GFF5446 at 76.391 kb on + strand, within GFF5446 at 76.406 kb on + strand, within GFF5446 at 76.406 kb on + strand, within GFF5446 at 76.406 kb on + strand, within GFF5446 at 76.406 kb on + strand, within GFF5446 at 76.407 kb on - strand, within GFF5446 at 76.407 kb on - strand, within GFF5446 at 76.407 kb on - strand, within GFF5446 at 76.814 kb on + strand, within GFF5446 at 76.814 kb on + strand, within GFF5446 at 76.814 kb on + strand, within GFF5446 at 76.814 kb on + strand, within GFF5446 at 76.814 kb on + strand, within GFF5446 at 76.814 kb on + strand, within GFF5446 at 76.815 kb on - strand, within GFF5446 at 76.815 kb on - strand, within GFF5446 at 76.815 kb on - strand, within GFF5446 at 76.815 kb on - strand, within GFF5446 at 76.815 kb on - strand, within GFF5446 at 76.815 kb on - strand, within GFF5446 at 76.815 kb on - strand, within GFF5446
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 74,014 + GFF5444 0.76 +0.9 74,014 + GFF5444 0.76 -0.4 74,898 - +0.0 75,126 + GFF5445 0.15 +2.3 75,126 + GFF5445 0.15 +3.0 75,126 + GFF5445 0.15 -0.2 75,126 + GFF5445 0.15 -1.3 75,127 - GFF5445 0.15 +0.3 75,127 - GFF5445 0.15 -1.7 75,336 + GFF5445 0.40 +2.0 75,381 + GFF5445 0.46 -0.6 75,382 - GFF5445 0.46 -1.1 75,382 - GFF5445 0.46 -0.5 75,480 + GFF5445 0.58 -0.3 75,480 + GFF5445 0.58 +0.0 75,480 + GFF5445 0.58 -0.6 75,480 + GFF5445 0.58 +0.2 75,480 + GFF5445 0.58 -2.3 75,481 - GFF5445 0.58 +0.2 75,481 - GFF5445 0.58 -1.1 75,481 - GFF5445 0.58 +1.4 75,481 - GFF5445 0.58 -1.8 75,481 - GFF5445 0.58 +0.5 75,504 + GFF5445 0.61 -1.6 75,566 + GFF5445 0.69 -0.8 75,567 - GFF5445 0.69 -1.5 75,819 + +0.9 75,820 - -0.1 75,820 - -0.5 75,820 - -0.7 75,820 - -0.0 76,307 + GFF5446 0.24 +0.3 76,307 + GFF5446 0.24 -0.3 76,308 - GFF5446 0.24 -0.7 76,322 + GFF5446 0.24 -0.5 76,322 + GFF5446 0.24 +0.6 76,322 + GFF5446 0.24 -0.1 76,322 + GFF5446 0.24 +0.8 76,322 + GFF5446 0.24 +1.3 76,322 + GFF5446 0.24 -0.1 76,322 + GFF5446 0.24 -2.0 76,322 + GFF5446 0.24 -1.1 76,322 + GFF5446 0.24 -1.1 76,323 - GFF5446 0.24 +0.7 76,323 - GFF5446 0.24 -0.0 76,323 - GFF5446 0.24 -0.6 76,323 - GFF5446 0.24 +0.5 76,323 - GFF5446 0.24 +0.5 76,323 - GFF5446 0.24 -1.9 76,323 - GFF5446 0.24 -0.6 76,323 - GFF5446 0.24 +0.5 76,323 - GFF5446 0.24 +1.7 76,323 - GFF5446 0.24 +0.2 76,323 - GFF5446 0.24 +0.0 76,323 - GFF5446 0.24 -0.7 76,323 - GFF5446 0.24 -1.9 76,323 - GFF5446 0.24 +1.0 76,391 + GFF5446 0.28 -1.7 76,406 + GFF5446 0.28 +1.0 76,406 + GFF5446 0.28 -0.8 76,406 + GFF5446 0.28 +0.5 76,406 + GFF5446 0.28 +0.2 76,407 - GFF5446 0.28 +0.1 76,407 - GFF5446 0.28 +0.3 76,407 - GFF5446 0.28 -0.5 76,814 + GFF5446 0.48 +0.8 76,814 + GFF5446 0.48 -0.2 76,814 + GFF5446 0.48 -0.4 76,814 + GFF5446 0.48 +0.3 76,814 + GFF5446 0.48 +0.2 76,814 + GFF5446 0.48 +1.3 76,815 - GFF5446 0.48 -0.2 76,815 - GFF5446 0.48 -0.8 76,815 - GFF5446 0.48 -0.7 76,815 - GFF5446 0.48 +1.1 76,815 - GFF5446 0.48 +0.5 76,815 - GFF5446 0.48 -0.3 76,815 - GFF5446 0.48 +0.2
Or see this region's nucleotide sequence