Strain Fitness in Variovorax sp. SCN45 around GFF4407

Experiment: phage_bap4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage_bap4
40,141	+		GFF4406	0.61	+0.5
40,141	+		GFF4406	0.61	-1.4
40,141	+		GFF4406	0.61	-2.0
40,141	+		GFF4406	0.61	+0.9
40,141	+		GFF4406	0.61	+0.4
40,141	+		GFF4406	0.61	-0.2
40,141	+		GFF4406	0.61	-1.0
40,141	+		GFF4406	0.61	+0.2
40,141	+		GFF4406	0.61	+0.3
40,142	-		GFF4406	0.61	-0.8
40,142	-		GFF4406	0.61	-0.0
40,142	-		GFF4406	0.61	-0.3
40,142	-		GFF4406	0.61	-0.7
40,142	-		GFF4406	0.61	-0.2
40,142	-		GFF4406	0.61	+2.0
40,142	-		GFF4406	0.61	-1.2
40,142	-		GFF4406	0.61	-0.0
40,142	-		GFF4406	0.61	-0.8
40,142	-		GFF4406	0.61	-0.7
40,148	+		GFF4406	0.61	+0.2
40,148	+		GFF4406	0.61	+0.2
40,148	+		GFF4406	0.61	-1.1
40,148	+		GFF4406	0.61	+1.8
40,148	+		GFF4406	0.61	+1.0
40,148	+		GFF4406	0.61	-0.4
40,148	+		GFF4406	0.61	-2.2
40,148	+		GFF4406	0.61	+1.1
40,148	+		GFF4406	0.61	-0.6
40,148	+		GFF4406	0.61	-0.4
40,148	+		GFF4406	0.61	-0.3
40,148	+		GFF4406	0.61	-0.3
40,148	+		GFF4406	0.61	+0.6
40,148	+		GFF4406	0.61	+0.8
40,148	+		GFF4406	0.61	-0.8
40,148	+		GFF4406	0.61	-2.0
40,148	+		GFF4406	0.61	-0.5
40,148	+		GFF4406	0.61	-0.2
40,148	+		GFF4406	0.61	-0.8
40,148	+		GFF4406	0.61	-0.1
40,148	+		GFF4406	0.61	-1.2
40,148	+		GFF4406	0.61	+1.2
40,148	+		GFF4406	0.61	-0.6
40,148	+		GFF4406	0.61	+0.8
40,148	+		GFF4406	0.61	-0.3
40,149	-		GFF4406	0.61	+0.3
40,149	-		GFF4406	0.61	-0.2
40,149	-		GFF4406	0.61	-0.2
40,149	-		GFF4406	0.61	-0.1
40,149	-		GFF4406	0.61	+0.1
40,149	-		GFF4406	0.61	+0.4
40,149	-		GFF4406	0.61	+0.8
40,149	-		GFF4406	0.61	-0.4
40,149	-		GFF4406	0.61	+0.0
40,149	-		GFF4406	0.61	-0.7
40,149	-		GFF4406	0.61	+0.4
40,149	-		GFF4406	0.61	-0.7
40,149	-		GFF4406	0.61	+0.1
40,149	-		GFF4406	0.61	+0.1
40,149	-		GFF4406	0.61	-1.4
40,149	-		GFF4406	0.61	-1.4
40,149	-		GFF4406	0.61	+0.6
40,149	-		GFF4406	0.61	-0.3
40,149	-		GFF4406	0.61	-0.0
40,149	-		GFF4406	0.61	-0.5
40,149	-		GFF4406	0.61	-0.7
40,149	-		GFF4406	0.61	-0.1
40,149	-		GFF4406	0.61	+0.6
40,149	-		GFF4406	0.61	-0.4
40,149	-		GFF4406	0.61	+0.5
40,149	-		GFF4406	0.61	-1.1
40,199	+		GFF4406	0.63	-0.6
40,199	+		GFF4406	0.63	+0.2
40,199	+		GFF4406	0.63	+0.2
40,199	+		GFF4406	0.63	+0.7
40,199	+		GFF4406	0.63	-0.6
40,199	+		GFF4406	0.63	-1.0
40,199	+		GFF4406	0.63	-0.5
40,199	+		GFF4406	0.63	-0.1
40,199	+		GFF4406	0.63	+0.4
40,199	+		GFF4406	0.63	-0.3
40,199	+		GFF4406	0.63	-0.3
40,199	+		GFF4406	0.63	-0.1
40,199	+		GFF4406	0.63	-0.0
40,200	-		GFF4406	0.63	+0.7
40,200	-		GFF4406	0.63	+0.1
40,200	-		GFF4406	0.63	+0.0
40,200	-		GFF4406	0.63	-0.1
40,200	-		GFF4406	0.63	-0.1
40,200	-		GFF4406	0.63	+0.6
40,200	-		GFF4406	0.63	-0.3
40,200	-		GFF4406	0.63	-1.0
40,203	+		GFF4406	0.63	-0.6
40,203	+		GFF4406	0.63	-0.2
40,203	+		GFF4406	0.63	+0.3
40,203	+		GFF4406	0.63	+0.2
40,203	+		GFF4406	0.63	-0.4
40,204	-		GFF4406	0.63	-0.0
40,204	-		GFF4406	0.63	+0.2
40,312	+		GFF4406	0.68	+0.1
40,312	+		GFF4406	0.68	+0.3
40,312	+		GFF4406	0.68	-0.5
40,312	+		GFF4406	0.68	+0.3
40,312	+		GFF4406	0.68	-0.4
40,313	-		GFF4406	0.68	-0.7
40,313	-		GFF4406	0.68	-0.3
40,313	-		GFF4406	0.68	+0.4
40,313	-		GFF4406	0.68	+0.7
40,342	+		GFF4406	0.69	-0.4
40,343	-		GFF4406	0.70	-0.4
40,343	-		GFF4406	0.70	+0.2
40,343	-		GFF4406	0.70	-0.0
40,343	-		GFF4406	0.70	+0.1
40,343	-		GFF4406	0.70	-0.8
40,343	-		GFF4406	0.70	-0.7
40,343	-		GFF4406	0.70	+0.2
40,357	+		GFF4406	0.70	-0.6
40,357	+		GFF4406	0.70	-0.4
40,357	+		GFF4406	0.70	+1.3
40,357	+		GFF4406	0.70	-1.7
40,357	+		GFF4406	0.70	+0.4
40,357	+		GFF4406	0.70	+0.0
40,357	+		GFF4406	0.70	-0.4
40,357	+		GFF4406	0.70	+0.8
40,357	+		GFF4406	0.70	-0.5
40,357	+		GFF4406	0.70	+0.7
40,357	+		GFF4406	0.70	-0.4
40,357	+		GFF4406	0.70	-0.1
40,357	+		GFF4406	0.70	-0.4
40,357	+		GFF4406	0.70	-0.3
40,357	+		GFF4406	0.70	-0.8
40,357	+		GFF4406	0.70	+0.2
40,357	+		GFF4406	0.70	+1.0
40,357	+		GFF4406	0.70	-0.2
40,357	+		GFF4406	0.70	-0.8
40,357	+		GFF4406	0.70	-0.7
40,357	+		GFF4406	0.70	-0.5
40,357	+		GFF4406	0.70	-0.8
40,357	+		GFF4406	0.70	-0.6
40,357	+		GFF4406	0.70	-0.6
40,358	-		GFF4406	0.70	-0.3
40,358	-		GFF4406	0.70	-0.0
40,358	-		GFF4406	0.70	-0.3
40,358	-		GFF4406	0.70	-1.7
40,358	-		GFF4406	0.70	-0.7
40,358	-		GFF4406	0.70	-0.1
40,358	-		GFF4406	0.70	-1.0
40,358	-		GFF4406	0.70	-0.4
40,358	-		GFF4406	0.70	-0.6
40,358	-		GFF4406	0.70	-0.4
40,358	-		GFF4406	0.70	-0.4
40,358	-		GFF4406	0.70	-0.8
40,358	-		GFF4406	0.70	+0.2
40,358	-		GFF4406	0.70	-0.8
40,358	-		GFF4406	0.70	-0.4
40,358	-		GFF4406	0.70	-1.0
40,358	-		GFF4406	0.70	-0.7
40,358	-		GFF4406	0.70	-0.4
40,361	+		GFF4406	0.70	+1.0
40,361	+		GFF4406	0.70	-0.2
40,361	+		GFF4406	0.70	-0.2
40,361	+		GFF4406	0.70	+0.2
40,361	+		GFF4406	0.70	-0.4
40,361	+		GFF4406	0.70	-0.0
40,361	+		GFF4406	0.70	-0.4
40,361	+		GFF4406	0.70	+0.0
40,361	+		GFF4406	0.70	-0.2
40,361	+		GFF4406	0.70	-1.5
40,361	+		GFF4406	0.70	+1.7
40,361	+		GFF4406	0.70	-0.8
40,361	+		GFF4406	0.70	-1.0
40,361	+		GFF4406	0.70	-0.1
40,361	+		GFF4406	0.70	+0.8
40,361	+		GFF4406	0.70	-0.2
40,361	+		GFF4406	0.70	+0.6
40,361	+		GFF4406	0.70	+0.6
40,361	+		GFF4406	0.70	-0.5
40,361	+		GFF4406	0.70	+0.1
40,361	+		GFF4406	0.70	+0.2
40,361	+		GFF4406	0.70	-0.6
40,362	-		GFF4406	0.70	-0.0
40,362	-		GFF4406	0.70	-3.8
40,362	-		GFF4406	0.70	+1.5
40,362	-		GFF4406	0.70	-1.3
40,362	-		GFF4406	0.70	+0.3
40,362	-		GFF4406	0.70	-0.1
40,362	-		GFF4406	0.70	+0.6
40,362	-		GFF4406	0.70	+0.2
40,362	-		GFF4406	0.70	+1.4
40,362	-		GFF4406	0.70	+0.4
40,362	-		GFF4406	0.70	-1.0
40,362	-		GFF4406	0.70	+0.2
40,362	-		GFF4406	0.70	-0.6
40,362	-		GFF4406	0.70	-0.5
40,362	-		GFF4406	0.70	-0.4
40,362	-		GFF4406	0.70	-0.4
40,362	-		GFF4406	0.70	+0.7
40,362	-		GFF4406	0.70	+2.4
40,362	-		GFF4406	0.70	-0.4
40,362	-		GFF4406	0.70	-0.2
40,362	-		GFF4406	0.70	-1.2
40,362	-		GFF4406	0.70	-0.1
40,362	-		GFF4406	0.70	+2.0
40,362	-		GFF4406	0.70	-1.9
40,362	-		GFF4406	0.70	-1.6
40,362	-		GFF4406	0.70	-0.2
40,362	-		GFF4406	0.70	+0.2
40,362	-		GFF4406	0.70	+0.3
40,362	-		GFF4406	0.70	-0.1
40,362	-		GFF4406	0.70	+1.5
40,362	-		GFF4406	0.70	-0.6
40,362	-		GFF4406	0.70	+0.6
40,362	-		GFF4406	0.70	-0.5
40,362	-		GFF4406	0.70	-0.6
40,362	-		GFF4406	0.70	-0.0
40,362	-		GFF4406	0.70	+0.1
40,362	-		GFF4406	0.70	+0.0
40,362	-		GFF4406	0.70	-0.3
40,362	-		GFF4406	0.70	+0.6
40,362	-		GFF4406	0.70	-0.1
40,362	-		GFF4406	0.70	-0.0
40,362	-		GFF4406	0.70	+0.0
40,362	-		GFF4406	0.70	+0.1
40,362	-		GFF4406	0.70	+0.1
40,362	-		GFF4406	0.70	+0.2
40,362	-		GFF4406	0.70	+1.0
40,362	-		GFF4406	0.70	+1.0
40,362	-		GFF4406	0.70	+0.3
40,362	-		GFF4406	0.70	+0.3
40,408	+		GFF4406	0.72	+0.2
40,408	+		GFF4406	0.72	-0.9
40,408	+		GFF4406	0.72	+1.2
40,408	+		GFF4406	0.72	-1.8
40,408	+		GFF4406	0.72	-1.1
40,408	+		GFF4406	0.72	+0.3
40,408	+		GFF4406	0.72	+0.3
40,408	+		GFF4406	0.72	-0.4
40,408	+		GFF4406	0.72	-0.6
40,408	+		GFF4406	0.72	+0.3
40,408	+		GFF4406	0.72	-0.3
40,408	+		GFF4406	0.72	+0.1
40,408	+		GFF4406	0.72	-1.2
40,408	+		GFF4406	0.72	+0.4
40,408	+		GFF4406	0.72	+1.2
40,408	+		GFF4406	0.72	-1.0
40,408	+		GFF4406	0.72	-1.8
40,408	+		GFF4406	0.72	-0.5
40,408	+		GFF4406	0.72	+0.0
40,408	+		GFF4406	0.72	-0.0
40,408	+		GFF4406	0.72	-0.5
40,408	+		GFF4406	0.72	+0.0
40,408	+		GFF4406	0.72	-0.3
40,408	+		GFF4406	0.72	+0.4
40,408	+		GFF4406	0.72	-0.2
40,409	-		GFF4406	0.72	-0.2
40,409	-		GFF4406	0.72	-0.1
40,409	-		GFF4406	0.72	-0.5
40,409	-		GFF4406	0.72	-1.5
40,409	-		GFF4406	0.72	-0.0
40,409	-		GFF4406	0.72	-0.0
40,409	-		GFF4406	0.72	-0.7
40,409	-		GFF4406	0.72	-0.8
40,409	-		GFF4406	0.72	-0.6
40,409	-		GFF4406	0.72	+0.0
40,409	-		GFF4406	0.72	-0.6
40,409	-		GFF4406	0.72	+0.0
40,409	-		GFF4406	0.72	+1.0
40,409	-		GFF4406	0.72	-0.6
40,409	-		GFF4406	0.72	+2.0
40,409	-		GFF4406	0.72	+0.5
40,409	-		GFF4406	0.72	+0.6
40,412	+		GFF4406	0.73	+1.0
40,412	+		GFF4406	0.73	+0.3
40,412	+		GFF4406	0.73	+0.0
40,412	+		GFF4406	0.73	-0.9
40,412	+		GFF4406	0.73	+0.8
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	-0.5
40,412	+		GFF4406	0.73	-0.8
40,412	+		GFF4406	0.73	-1.2
40,412	+		GFF4406	0.73	+0.7
40,412	+		GFF4406	0.73	-0.6
40,412	+		GFF4406	0.73	-1.8
40,412	+		GFF4406	0.73	-0.8
40,412	+		GFF4406	0.73	-1.4
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	+1.0
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	-1.1
40,412	+		GFF4406	0.73	+0.1
40,412	+		GFF4406	0.73	+0.1
40,412	+		GFF4406	0.73	-0.2
40,412	+		GFF4406	0.73	-0.9
40,412	+		GFF4406	0.73	-0.6
40,412	+		GFF4406	0.73	-0.5
40,412	+		GFF4406	0.73	-0.8
40,412	+		GFF4406	0.73	+0.6
40,412	+		GFF4406	0.73	+0.2
40,412	+		GFF4406	0.73	-0.6
40,412	+		GFF4406	0.73	-0.3
40,412	+		GFF4406	0.73	-0.3
40,412	+		GFF4406	0.73	+0.4
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	-0.6
40,412	+		GFF4406	0.73	+1.6
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	-0.7
40,412	+		GFF4406	0.73	-0.4
40,412	+		GFF4406	0.73	-1.5
40,412	+		GFF4406	0.73	-0.9
40,412	+		GFF4406	0.73	-0.7
40,412	+		GFF4406	0.73	+0.2
40,413	-		GFF4406	0.73	-0.0
40,413	-		GFF4406	0.73	-0.5
40,413	-		GFF4406	0.73	+0.1
40,413	-		GFF4406	0.73	-0.3
40,413	-		GFF4406	0.73	-0.2
40,413	-		GFF4406	0.73	+1.0
40,413	-		GFF4406	0.73	-0.1
40,413	-		GFF4406	0.73	+0.0
40,413	-		GFF4406	0.73	+0.2
40,413	-		GFF4406	0.73	-1.0
40,413	-		GFF4406	0.73	-2.2
40,413	-		GFF4406	0.73	-0.4
40,413	-		GFF4406	0.73	+0.2
40,413	-		GFF4406	0.73	-1.1
40,413	-		GFF4406	0.73	-0.3
40,413	-		GFF4406	0.73	-0.8
40,413	-		GFF4406	0.73	+0.6
40,413	-		GFF4406	0.73	-0.5
40,413	-		GFF4406	0.73	+2.0
40,413	-		GFF4406	0.73	-1.1
40,413	-		GFF4406	0.73	-0.0
40,413	-		GFF4406	0.73	+1.4
40,413	-		GFF4406	0.73	-0.2
40,413	-		GFF4406	0.73	-0.4
40,413	-		GFF4406	0.73	-0.6
40,413	-		GFF4406	0.73	+0.9
40,413	-		GFF4406	0.73	-0.2
40,413	-		GFF4406	0.73	+0.6
40,413	-		GFF4406	0.73	-1.0
40,413	-		GFF4406	0.73	-0.2
40,413	-		GFF4406	0.73	-0.8
40,413	-		GFF4406	0.73	-0.8
40,413	-		GFF4406	0.73	-0.2
40,413	-		GFF4406	0.73	+0.6
40,501	+		GFF4406	0.77	-0.6
40,516	+		GFF4406	0.77	-0.4
40,516	+		GFF4406	0.77	-0.4
40,516	+		GFF4406	0.77	-0.6
40,516	+		GFF4406	0.77	+1.1
40,516	+		GFF4406	0.77	-0.7
40,516	+		GFF4406	0.77	-0.2
40,516	+		GFF4406	0.77	-2.1
40,516	+		GFF4406	0.77	+1.2
40,516	+		GFF4406	0.77	-0.6
40,516	+		GFF4406	0.77	+0.5
40,516	+		GFF4406	0.77	-0.3
40,516	+		GFF4406	0.77	-0.4
40,516	+		GFF4406	0.77	+0.2
40,517	-		GFF4406	0.77	+0.5
40,517	-		GFF4406	0.77	+0.2
40,517	-		GFF4406	0.77	+0.2
40,517	-		GFF4406	0.77	-0.5
40,517	-		GFF4406	0.77	-0.1
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