Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4352 and GFF4353 are separated by 34 nucleotides GFF4353 and GFF4354 are separated by 39 nucleotides GFF4354 and GFF4355 are separated by 24 nucleotides
GFF4352 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 274,701 to 276,257
GFF4352
GFF4353 - Alpha-methylacyl-CoA racemase (EC 5.1.99.4), at 276,292 to 277,440
GFF4353
GFF4354 - KEGG: phosphoglycerate mutase , at 277,480 to 278,061
GFF4354
GFF4355 - Alcohol dehydrogenase (EC 1.1.1.1), at 278,086 to 279,123
GFF4355
Position (kb) 276
277
278 Strain fitness (log2 ratio) -1
0
1
2 at 275.503 kb on - strand, within GFF4352 at 276.200 kb on - strand at 276.619 kb on + strand, within GFF4353 at 276.685 kb on + strand, within GFF4353 at 276.686 kb on - strand, within GFF4353 at 276.784 kb on + strand, within GFF4353 at 276.784 kb on + strand, within GFF4353 at 276.785 kb on - strand, within GFF4353 at 276.785 kb on - strand, within GFF4353 at 276.889 kb on + strand, within GFF4353 at 276.889 kb on + strand, within GFF4353 at 276.890 kb on - strand, within GFF4353 at 276.890 kb on - strand, within GFF4353 at 276.890 kb on - strand, within GFF4353 at 276.890 kb on - strand, within GFF4353 at 276.895 kb on + strand, within GFF4353 at 276.895 kb on + strand, within GFF4353 at 276.895 kb on + strand, within GFF4353 at 276.895 kb on + strand, within GFF4353 at 276.895 kb on + strand, within GFF4353 at 276.896 kb on - strand, within GFF4353 at 276.896 kb on - strand, within GFF4353 at 276.896 kb on - strand, within GFF4353 at 276.896 kb on - strand, within GFF4353 at 277.000 kb on + strand, within GFF4353 at 277.000 kb on + strand, within GFF4353 at 277.001 kb on - strand, within GFF4353 at 277.001 kb on - strand, within GFF4353 at 277.001 kb on - strand, within GFF4353 at 277.034 kb on - strand, within GFF4353 at 277.034 kb on - strand, within GFF4353 at 277.449 kb on + strand at 277.450 kb on - strand at 277.481 kb on + strand at 278.259 kb on - strand, within GFF4355
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 275,503 - GFF4352 0.52 -0.3 276,200 - +0.8 276,619 + GFF4353 0.28 +2.0 276,685 + GFF4353 0.34 -0.6 276,686 - GFF4353 0.34 +0.3 276,784 + GFF4353 0.43 +0.1 276,784 + GFF4353 0.43 -0.7 276,785 - GFF4353 0.43 +1.5 276,785 - GFF4353 0.43 -0.3 276,889 + GFF4353 0.52 +1.1 276,889 + GFF4353 0.52 +1.2 276,890 - GFF4353 0.52 +0.3 276,890 - GFF4353 0.52 -0.1 276,890 - GFF4353 0.52 -0.4 276,890 - GFF4353 0.52 -0.2 276,895 + GFF4353 0.52 -0.1 276,895 + GFF4353 0.52 -0.3 276,895 + GFF4353 0.52 -0.3 276,895 + GFF4353 0.52 -0.3 276,895 + GFF4353 0.52 -1.3 276,896 - GFF4353 0.53 +0.2 276,896 - GFF4353 0.53 -0.1 276,896 - GFF4353 0.53 -0.2 276,896 - GFF4353 0.53 -0.4 277,000 + GFF4353 0.62 +0.2 277,000 + GFF4353 0.62 +0.3 277,001 - GFF4353 0.62 +0.1 277,001 - GFF4353 0.62 -0.1 277,001 - GFF4353 0.62 -0.1 277,034 - GFF4353 0.65 -1.0 277,034 - GFF4353 0.65 -0.5 277,449 + -0.6 277,450 - -0.2 277,481 + -0.8 278,259 - GFF4355 0.17 -0.5
Or see this region's nucleotide sequence