Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1760 and GFF1761 overlap by 4 nucleotides GFF1761 and GFF1762 are separated by 8 nucleotides
GFF1760 - Probable transmembrane protein, at 421,962 to 423,167
GFF1760
GFF1761 - Putative hemolysin, at 423,164 to 424,021
GFF1761
GFF1762 - no description, at 424,030 to 425,124
GFF1762
Position (kb) 423
424
425 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 422.668 kb on + strand, within GFF1760 at 422.668 kb on + strand, within GFF1760 at 422.668 kb on + strand, within GFF1760 at 422.669 kb on - strand, within GFF1760 at 422.669 kb on - strand, within GFF1760 at 422.669 kb on - strand, within GFF1760 at 422.821 kb on + strand, within GFF1760 at 422.821 kb on + strand, within GFF1760 at 422.821 kb on + strand, within GFF1760 at 422.821 kb on + strand, within GFF1760 at 422.821 kb on + strand, within GFF1760 at 422.822 kb on - strand, within GFF1760 at 422.822 kb on - strand, within GFF1760 at 422.822 kb on - strand, within GFF1760 at 422.836 kb on + strand, within GFF1760 at 422.837 kb on - strand, within GFF1760 at 422.866 kb on + strand, within GFF1760 at 422.866 kb on + strand, within GFF1760 at 422.866 kb on + strand, within GFF1760 at 422.998 kb on + strand, within GFF1760 at 422.998 kb on + strand, within GFF1760 at 422.999 kb on - strand, within GFF1760 at 423.256 kb on + strand, within GFF1761 at 423.256 kb on + strand, within GFF1761 at 423.312 kb on + strand, within GFF1761 at 423.312 kb on + strand, within GFF1761 at 423.312 kb on + strand, within GFF1761 at 423.313 kb on - strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.537 kb on + strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.538 kb on - strand, within GFF1761 at 423.673 kb on - strand, within GFF1761 at 423.717 kb on + strand, within GFF1761 at 423.717 kb on + strand, within GFF1761 at 423.718 kb on - strand, within GFF1761 at 423.718 kb on - strand, within GFF1761 at 423.718 kb on - strand, within GFF1761 at 424.577 kb on + strand, within GFF1762 at 424.577 kb on + strand, within GFF1762 at 424.578 kb on - strand, within GFF1762 at 424.578 kb on - strand, within GFF1762 at 424.631 kb on + strand, within GFF1762 at 424.631 kb on + strand, within GFF1762 at 424.664 kb on + strand, within GFF1762 at 424.665 kb on - strand, within GFF1762 at 424.709 kb on + strand, within GFF1762 at 424.709 kb on + strand, within GFF1762 at 424.709 kb on + strand, within GFF1762 at 424.710 kb on - strand, within GFF1762 at 424.910 kb on + strand, within GFF1762
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 422,668 + GFF1760 0.59 +0.5 422,668 + GFF1760 0.59 -1.0 422,668 + GFF1760 0.59 -0.8 422,669 - GFF1760 0.59 -0.5 422,669 - GFF1760 0.59 +0.2 422,669 - GFF1760 0.59 +0.7 422,821 + GFF1760 0.71 -2.2 422,821 + GFF1760 0.71 +0.3 422,821 + GFF1760 0.71 -0.5 422,821 + GFF1760 0.71 -0.4 422,821 + GFF1760 0.71 +0.4 422,822 - GFF1760 0.71 +0.7 422,822 - GFF1760 0.71 -0.7 422,822 - GFF1760 0.71 -0.4 422,836 + GFF1760 0.72 +3.8 422,837 - GFF1760 0.73 -0.5 422,866 + GFF1760 0.75 -0.5 422,866 + GFF1760 0.75 -0.6 422,866 + GFF1760 0.75 -1.0 422,998 + GFF1760 0.86 -1.7 422,998 + GFF1760 0.86 +0.1 422,999 - GFF1760 0.86 +0.0 423,256 + GFF1761 0.11 +0.0 423,256 + GFF1761 0.11 -1.2 423,312 + GFF1761 0.17 -0.3 423,312 + GFF1761 0.17 -0.6 423,312 + GFF1761 0.17 -0.4 423,313 - GFF1761 0.17 +1.8 423,537 + GFF1761 0.43 -0.5 423,537 + GFF1761 0.43 +0.4 423,537 + GFF1761 0.43 -0.7 423,537 + GFF1761 0.43 -0.6 423,537 + GFF1761 0.43 -0.6 423,537 + GFF1761 0.43 +0.1 423,537 + GFF1761 0.43 -1.2 423,537 + GFF1761 0.43 -0.5 423,537 + GFF1761 0.43 -0.5 423,537 + GFF1761 0.43 -0.6 423,537 + GFF1761 0.43 -0.2 423,537 + GFF1761 0.43 -0.3 423,538 - GFF1761 0.44 -1.3 423,538 - GFF1761 0.44 -0.8 423,538 - GFF1761 0.44 -1.5 423,538 - GFF1761 0.44 +0.2 423,538 - GFF1761 0.44 +0.5 423,538 - GFF1761 0.44 -0.1 423,538 - GFF1761 0.44 -0.2 423,538 - GFF1761 0.44 -0.1 423,538 - GFF1761 0.44 -0.8 423,538 - GFF1761 0.44 +1.5 423,673 - GFF1761 0.59 +1.8 423,717 + GFF1761 0.64 -0.6 423,717 + GFF1761 0.64 -0.2 423,718 - GFF1761 0.65 -1.2 423,718 - GFF1761 0.65 -0.3 423,718 - GFF1761 0.65 +0.3 424,577 + GFF1762 0.50 +0.3 424,577 + GFF1762 0.50 +0.3 424,578 - GFF1762 0.50 +0.1 424,578 - GFF1762 0.50 -0.6 424,631 + GFF1762 0.55 +0.3 424,631 + GFF1762 0.55 -1.3 424,664 + GFF1762 0.58 +0.4 424,665 - GFF1762 0.58 -0.5 424,709 + GFF1762 0.62 -0.4 424,709 + GFF1762 0.62 +0.3 424,709 + GFF1762 0.62 -1.3 424,710 - GFF1762 0.62 +1.0 424,910 + GFF1762 0.80 +0.3
Or see this region's nucleotide sequence