Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14260 and A4249_RS14265 overlap by 4 nucleotides A4249_RS14265 and A4249_RS14270 are separated by 95 nucleotides
A4249_RS14260: A4249_RS14260 - membrane protein insertase YidC, at 2,870,841 to 2,872,637
_RS14260
A4249_RS14265: A4249_RS14265 - ribosome biogenesis GTP-binding protein YihA/YsxC, at 2,872,634 to 2,873,287
_RS14265
A4249_RS14270: A4249_RS14270 - pitrilysin family protein, at 2,873,383 to 2,876,247
_RS14270
Position (kb)
2872
2873
2874 Strain fitness (log2 ratio)
-2
-1
0
1 at 2872.579 kb on - strand at 2873.286 kb on - strand at 2873.384 kb on + strand at 2873.384 kb on + strand at 2873.384 kb on + strand at 2873.385 kb on - strand at 2873.385 kb on - strand at 2873.570 kb on + strand at 2873.636 kb on + strand at 2873.637 kb on - strand at 2873.637 kb on - strand at 2873.792 kb on + strand, within A4249_RS14270 at 2873.792 kb on + strand, within A4249_RS14270 at 2873.793 kb on - strand, within A4249_RS14270 at 2873.793 kb on - strand, within A4249_RS14270 at 2873.793 kb on - strand, within A4249_RS14270 at 2873.793 kb on - strand, within A4249_RS14270 at 2873.793 kb on - strand, within A4249_RS14270 at 2873.793 kb on - strand, within A4249_RS14270 at 2873.837 kb on + strand, within A4249_RS14270 at 2873.837 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.972 kb on + strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2873.973 kb on - strand, within A4249_RS14270 at 2874.176 kb on + strand, within A4249_RS14270 at 2874.177 kb on - strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.269 kb on + strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270 at 2874.270 kb on - strand, within A4249_RS14270
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,872,579 - +0.6 2,873,286 - -0.1 2,873,384 + -1.1 2,873,384 + +1.7 2,873,384 + +0.6 2,873,385 - -0.3 2,873,385 - +1.4 2,873,570 + -0.2 2,873,636 + +0.1 2,873,637 - -0.4 2,873,637 - +0.7 2,873,792 + A4249_RS14270 0.14 -0.2 2,873,792 + A4249_RS14270 0.14 +0.8 2,873,793 - A4249_RS14270 0.14 -0.2 2,873,793 - A4249_RS14270 0.14 -0.9 2,873,793 - A4249_RS14270 0.14 +0.1 2,873,793 - A4249_RS14270 0.14 +0.4 2,873,793 - A4249_RS14270 0.14 -0.3 2,873,793 - A4249_RS14270 0.14 -0.2 2,873,837 + A4249_RS14270 0.16 +0.4 2,873,837 + A4249_RS14270 0.16 -1.2 2,873,972 + A4249_RS14270 0.21 -0.6 2,873,972 + A4249_RS14270 0.21 -1.2 2,873,972 + A4249_RS14270 0.21 -0.4 2,873,972 + A4249_RS14270 0.21 +0.1 2,873,972 + A4249_RS14270 0.21 +0.6 2,873,972 + A4249_RS14270 0.21 -0.1 2,873,972 + A4249_RS14270 0.21 +1.1 2,873,973 - A4249_RS14270 0.21 +0.7 2,873,973 - A4249_RS14270 0.21 -0.2 2,873,973 - A4249_RS14270 0.21 +0.3 2,873,973 - A4249_RS14270 0.21 +0.1 2,873,973 - A4249_RS14270 0.21 -0.1 2,873,973 - A4249_RS14270 0.21 +0.1 2,873,973 - A4249_RS14270 0.21 -1.9 2,873,973 - A4249_RS14270 0.21 +0.6 2,873,973 - A4249_RS14270 0.21 +0.0 2,874,176 + A4249_RS14270 0.28 +0.2 2,874,177 - A4249_RS14270 0.28 -1.7 2,874,269 + A4249_RS14270 0.31 -0.3 2,874,269 + A4249_RS14270 0.31 -0.4 2,874,269 + A4249_RS14270 0.31 -0.7 2,874,269 + A4249_RS14270 0.31 +0.1 2,874,269 + A4249_RS14270 0.31 +0.1 2,874,269 + A4249_RS14270 0.31 -0.6 2,874,269 + A4249_RS14270 0.31 +1.0 2,874,269 + A4249_RS14270 0.31 -0.2 2,874,269 + A4249_RS14270 0.31 +0.1 2,874,270 - A4249_RS14270 0.31 -0.2 2,874,270 - A4249_RS14270 0.31 +0.2 2,874,270 - A4249_RS14270 0.31 +0.4 2,874,270 - A4249_RS14270 0.31 +0.4 2,874,270 - A4249_RS14270 0.31 -0.8 2,874,270 - A4249_RS14270 0.31 -0.2 2,874,270 - A4249_RS14270 0.31 -0.1 2,874,270 - A4249_RS14270 0.31 -0.1 2,874,270 - A4249_RS14270 0.31 +1.0 2,874,270 - A4249_RS14270 0.31 +0.1 2,874,270 - A4249_RS14270 0.31 -0.4 2,874,270 - A4249_RS14270 0.31 +0.4 2,874,270 - A4249_RS14270 0.31 +0.5 2,874,270 - A4249_RS14270 0.31 +0.4
Or see this region's nucleotide sequence