Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13885

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13875 and A4249_RS13880 are separated by 54 nucleotidesA4249_RS13880 and A4249_RS13885 are separated by 671 nucleotidesA4249_RS13885 and A4249_RS13890 are separated by 221 nucleotidesA4249_RS13890 and A4249_RS13895 are separated by 83 nucleotidesA4249_RS13895 and A4249_RS13900 are separated by 200 nucleotides A4249_RS13875: A4249_RS13875 - DUF167 domain-containing protein, at 2,800,833 to 2,801,123 _RS13875 A4249_RS13880: A4249_RS13880 - hypothetical protein, at 2,801,178 to 2,801,378 _RS13880 A4249_RS13885: A4249_RS13885 - 16S ribosomal RNA, at 2,802,050 to 2,803,510 _RS13885 A4249_RS13890: A4249_RS13890 - tRNA-Ile, at 2,803,732 to 2,803,808 _RS13890 A4249_RS13895: A4249_RS13895 - tRNA-Ala, at 2,803,892 to 2,803,967 _RS13895 A4249_RS13900: A4249_RS13900 - 23S ribosomal RNA, at 2,804,168 to 2,806,941 _RS13900 Position (kb) 2802 2803 2804Strain fitness (log2 ratio) -1 0 1 2at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.244 kb on + strand, within A4249_RS13880at 2801.245 kb on - strand, within A4249_RS13880at 2801.245 kb on - strand, within A4249_RS13880at 2801.245 kb on - strand, within A4249_RS13880at 2801.245 kb on - strand, within A4249_RS13880at 2801.246 kb on + strand, within A4249_RS13880at 2801.246 kb on + strand, within A4249_RS13880at 2801.246 kb on + strand, within A4249_RS13880at 2801.246 kb on + strand, within A4249_RS13880at 2801.246 kb on + strand, within A4249_RS13880at 2801.247 kb on - strand, within A4249_RS13880

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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2,801,244 + A4249_RS13880 0.33 -0.1
2,801,244 + A4249_RS13880 0.33 -0.2
2,801,244 + A4249_RS13880 0.33 -0.6
2,801,244 + A4249_RS13880 0.33 +0.7
2,801,244 + A4249_RS13880 0.33 -0.5
2,801,244 + A4249_RS13880 0.33 +0.2
2,801,244 + A4249_RS13880 0.33 -0.4
2,801,244 + A4249_RS13880 0.33 +0.0
2,801,244 + A4249_RS13880 0.33 -0.3
2,801,244 + A4249_RS13880 0.33 -0.2
2,801,244 + A4249_RS13880 0.33 +2.1
2,801,244 + A4249_RS13880 0.33 +0.4
2,801,244 + A4249_RS13880 0.33 +0.1
2,801,245 - A4249_RS13880 0.33 +1.0
2,801,245 - A4249_RS13880 0.33 +0.3
2,801,245 - A4249_RS13880 0.33 -0.1
2,801,245 - A4249_RS13880 0.33 -0.6
2,801,246 + A4249_RS13880 0.34 +0.6
2,801,246 + A4249_RS13880 0.34 +0.4
2,801,246 + A4249_RS13880 0.34 +0.5
2,801,246 + A4249_RS13880 0.34 +0.8
2,801,246 + A4249_RS13880 0.34 +1.0
2,801,247 - A4249_RS13880 0.34 +0.5

Or see this region's nucleotide sequence