Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12850 and A4249_RS12855 are separated by 333 nucleotides A4249_RS12855 and A4249_RS12860 are separated by 12 nucleotides A4249_RS12860 and A4249_RS12865 are separated by 111 nucleotides
A4249_RS12850: A4249_RS12850 - pitrilysin family protein, at 2,577,719 to 2,580,583
_RS12850
A4249_RS12855: A4249_RS12855 - serine protease, at 2,580,917 to 2,581,750
_RS12855
A4249_RS12860: A4249_RS12860 - DUF350 domain-containing protein, at 2,581,763 to 2,582,203
_RS12860
A4249_RS12865: A4249_RS12865 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 2,582,315 to 2,583,475
_RS12865
Position (kb)
2580
2581
2582 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2580.116 kb on + strand, within A4249_RS12850 at 2580.116 kb on + strand, within A4249_RS12850 at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.359 kb on + strand at 2580.360 kb on - strand at 2580.360 kb on - strand at 2580.360 kb on - strand at 2580.390 kb on - strand at 2580.582 kb on - strand at 2580.648 kb on + strand at 2580.649 kb on - strand at 2580.729 kb on + strand at 2580.729 kb on + strand at 2580.729 kb on + strand at 2580.729 kb on + strand at 2580.730 kb on - strand at 2580.730 kb on - strand at 2580.730 kb on - strand at 2580.730 kb on - strand at 2580.730 kb on - strand at 2580.730 kb on - strand at 2580.984 kb on + strand at 2580.984 kb on + strand at 2580.984 kb on + strand at 2580.985 kb on - strand at 2580.985 kb on - strand at 2580.985 kb on - strand at 2581.075 kb on + strand, within A4249_RS12855 at 2581.076 kb on - strand, within A4249_RS12855 at 2581.076 kb on - strand, within A4249_RS12855 at 2581.076 kb on - strand, within A4249_RS12855 at 2581.076 kb on - strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.077 kb on + strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.078 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.807 kb on + strand, within A4249_RS12860 at 2582.079 kb on + strand, within A4249_RS12860 at 2582.079 kb on + strand, within A4249_RS12860 at 2582.080 kb on - strand, within A4249_RS12860 at 2582.080 kb on - strand, within A4249_RS12860 at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.338 kb on + strand at 2582.338 kb on + strand at 2582.339 kb on - strand at 2582.436 kb on + strand, within A4249_RS12865 at 2582.437 kb on - strand, within A4249_RS12865 at 2582.497 kb on - strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.617 kb on - strand, within A4249_RS12865 at 2582.617 kb on - strand, within A4249_RS12865 at 2582.617 kb on - strand, within A4249_RS12865 at 2582.655 kb on + strand, within A4249_RS12865 at 2582.656 kb on - strand, within A4249_RS12865 at 2582.691 kb on + strand, within A4249_RS12865 at 2582.691 kb on + strand, within A4249_RS12865 at 2582.692 kb on - strand, within A4249_RS12865
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,580,116 + A4249_RS12850 0.84 -0.0 2,580,116 + A4249_RS12850 0.84 -0.5 2,580,359 + -0.2 2,580,359 + -1.3 2,580,359 + +0.7 2,580,359 + +0.2 2,580,359 + -0.5 2,580,359 + +0.8 2,580,359 + +0.2 2,580,359 + +0.2 2,580,360 - +0.3 2,580,360 - +0.8 2,580,360 - +0.0 2,580,390 - -2.4 2,580,582 - -0.7 2,580,648 + -0.2 2,580,649 - -1.6 2,580,729 + +0.5 2,580,729 + +0.2 2,580,729 + -0.4 2,580,729 + +0.3 2,580,730 - -0.2 2,580,730 - -1.0 2,580,730 - +0.9 2,580,730 - +0.9 2,580,730 - -0.2 2,580,730 - +0.4 2,580,984 + -0.6 2,580,984 + +0.2 2,580,984 + -1.4 2,580,985 - +1.8 2,580,985 - +1.7 2,580,985 - +0.7 2,581,075 + A4249_RS12855 0.19 -1.1 2,581,076 - A4249_RS12855 0.19 +0.7 2,581,076 - A4249_RS12855 0.19 -0.0 2,581,076 - A4249_RS12855 0.19 +0.0 2,581,076 - A4249_RS12855 0.19 -0.3 2,581,077 + A4249_RS12855 0.19 +1.1 2,581,077 + A4249_RS12855 0.19 +0.1 2,581,077 + A4249_RS12855 0.19 -1.8 2,581,077 + A4249_RS12855 0.19 -1.5 2,581,077 + A4249_RS12855 0.19 +0.9 2,581,077 + A4249_RS12855 0.19 -0.0 2,581,077 + A4249_RS12855 0.19 +0.7 2,581,078 - A4249_RS12855 0.19 +0.1 2,581,078 - A4249_RS12855 0.19 +1.2 2,581,078 - A4249_RS12855 0.19 +0.0 2,581,078 - A4249_RS12855 0.19 +0.1 2,581,078 - A4249_RS12855 0.19 +0.2 2,581,078 - A4249_RS12855 0.19 -0.5 2,581,078 - A4249_RS12855 0.19 +1.2 2,581,078 - A4249_RS12855 0.19 -0.8 2,581,078 - A4249_RS12855 0.19 -1.5 2,581,608 - A4249_RS12855 0.83 -0.5 2,581,608 - A4249_RS12855 0.83 -0.2 2,581,608 - A4249_RS12855 0.83 -0.6 2,581,608 - A4249_RS12855 0.83 -1.5 2,581,608 - A4249_RS12855 0.83 -1.0 2,581,608 - A4249_RS12855 0.83 -0.5 2,581,608 - A4249_RS12855 0.83 +0.4 2,581,716 + -0.2 2,581,716 + -0.5 2,581,716 + +0.5 2,581,716 + +1.2 2,581,716 + +0.1 2,581,716 + +0.6 2,581,717 - +0.5 2,581,717 - +0.3 2,581,717 - +0.3 2,581,717 - +0.1 2,581,717 - +0.2 2,581,717 - +0.0 2,581,717 - -0.1 2,581,717 - -0.3 2,581,717 - -1.9 2,581,717 - +0.1 2,581,717 - +0.9 2,581,717 - +0.2 2,581,807 + A4249_RS12860 0.10 +1.1 2,582,079 + A4249_RS12860 0.72 +0.1 2,582,079 + A4249_RS12860 0.72 -0.2 2,582,080 - A4249_RS12860 0.72 +0.2 2,582,080 - A4249_RS12860 0.72 +0.2 2,582,269 + -0.1 2,582,269 + +0.5 2,582,269 + +0.9 2,582,269 + -0.5 2,582,269 + -0.3 2,582,269 + -0.1 2,582,269 + +0.1 2,582,269 + +1.2 2,582,269 + -0.2 2,582,269 + +0.7 2,582,270 - -0.3 2,582,270 - -0.2 2,582,270 - -0.8 2,582,270 - -0.2 2,582,270 - +0.4 2,582,338 + +0.2 2,582,338 + +0.2 2,582,339 - -0.3 2,582,436 + A4249_RS12865 0.10 +1.9 2,582,437 - A4249_RS12865 0.11 -0.1 2,582,497 - A4249_RS12865 0.16 -0.7 2,582,616 + A4249_RS12865 0.26 +0.2 2,582,616 + A4249_RS12865 0.26 +0.7 2,582,616 + A4249_RS12865 0.26 -0.0 2,582,616 + A4249_RS12865 0.26 +0.1 2,582,616 + A4249_RS12865 0.26 -0.2 2,582,616 + A4249_RS12865 0.26 -0.3 2,582,616 + A4249_RS12865 0.26 +0.6 2,582,616 + A4249_RS12865 0.26 +1.7 2,582,616 + A4249_RS12865 0.26 +0.4 2,582,617 - A4249_RS12865 0.26 +0.2 2,582,617 - A4249_RS12865 0.26 +2.2 2,582,617 - A4249_RS12865 0.26 -0.5 2,582,655 + A4249_RS12865 0.29 +1.7 2,582,656 - A4249_RS12865 0.29 -1.1 2,582,691 + A4249_RS12865 0.32 +0.0 2,582,691 + A4249_RS12865 0.32 -0.8 2,582,692 - A4249_RS12865 0.32 -0.0
Or see this region's nucleotide sequence