Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12145 and A4249_RS12150 overlap by 4 nucleotides A4249_RS12150 and A4249_RS12155 are separated by 120 nucleotides A4249_RS12155 and A4249_RS12160 overlap by 4 nucleotides A4249_RS12160 and A4249_RS12165 overlap by 32 nucleotides A4249_RS12165 and A4249_RS12170 are separated by 255 nucleotides
A4249_RS12145: A4249_RS12145 - HPr family phosphocarrier protein, at 2,439,820 to 2,440,092
_RS12145
A4249_RS12150: A4249_RS12150 - PTS sugar transporter subunit IIA, at 2,440,089 to 2,440,493
_RS12150
A4249_RS12155: A4249_RS12155 - HPr kinase/phosphatase C-terminal domain-containing protein, at 2,440,614 to 2,441,042
_RS12155
A4249_RS12160: A4249_RS12160 - ATP-binding protein, at 2,441,039 to 2,442,649
_RS12160
A4249_RS12165: A4249_RS12165 - response regulator transcription factor, at 2,442,618 to 2,443,322
_RS12165
A4249_RS12170: A4249_RS12170 - hypothetical protein, at 2,443,578 to 2,445,296
_RS12170
Position (kb)
2441
2442
2443 Strain fitness (log2 ratio)
-1
0
1 at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.129 kb on + strand at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.130 kb on - strand, within A4249_RS12150 at 2440.571 kb on + strand at 2440.571 kb on + strand at 2440.571 kb on + strand at 2440.572 kb on - strand at 2440.594 kb on + strand at 2440.594 kb on + strand at 2440.594 kb on + strand at 2440.595 kb on - strand at 2440.595 kb on - strand at 2440.595 kb on - strand at 2440.595 kb on - strand at 2440.595 kb on - strand at 2443.344 kb on - strand at 2443.344 kb on - strand at 2443.344 kb on - strand at 2443.377 kb on - strand at 2443.405 kb on + strand at 2443.406 kb on - strand at 2443.406 kb on - strand at 2443.523 kb on - strand at 2443.552 kb on - strand at 2443.552 kb on - strand at 2443.552 kb on - strand at 2443.596 kb on + strand at 2443.596 kb on + strand at 2443.597 kb on - strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,440,129 + -0.3 2,440,129 + +0.1 2,440,129 + -0.1 2,440,129 + +0.1 2,440,129 + -0.6 2,440,129 + -0.2 2,440,129 + +0.4 2,440,129 + -0.4 2,440,129 + -0.2 2,440,129 + -0.6 2,440,129 + -0.6 2,440,129 + -0.2 2,440,129 + -0.1 2,440,130 - A4249_RS12150 0.10 -0.0 2,440,130 - A4249_RS12150 0.10 -0.4 2,440,130 - A4249_RS12150 0.10 +0.1 2,440,130 - A4249_RS12150 0.10 +0.1 2,440,130 - A4249_RS12150 0.10 -0.1 2,440,130 - A4249_RS12150 0.10 +0.4 2,440,130 - A4249_RS12150 0.10 +1.0 2,440,130 - A4249_RS12150 0.10 -0.8 2,440,130 - A4249_RS12150 0.10 -0.3 2,440,130 - A4249_RS12150 0.10 -0.9 2,440,130 - A4249_RS12150 0.10 -0.4 2,440,130 - A4249_RS12150 0.10 +0.6 2,440,130 - A4249_RS12150 0.10 -0.2 2,440,571 + -0.8 2,440,571 + -0.2 2,440,571 + +1.4 2,440,572 - -0.4 2,440,594 + -0.7 2,440,594 + -0.2 2,440,594 + +0.1 2,440,595 - -1.2 2,440,595 - +0.6 2,440,595 - -0.8 2,440,595 - -0.1 2,440,595 - -0.5 2,443,344 - +0.2 2,443,344 - +0.2 2,443,344 - -0.1 2,443,377 - +0.8 2,443,405 + +0.4 2,443,406 - -0.2 2,443,406 - +0.4 2,443,523 - -0.2 2,443,552 - -1.0 2,443,552 - -0.1 2,443,552 - -0.9 2,443,596 + +0.8 2,443,596 + -1.2 2,443,597 - +0.8 2,443,605 + +0.7 2,443,605 + -0.6 2,443,605 + -0.7 2,443,605 + -0.1 2,443,605 + -0.3 2,443,605 + +0.2 2,443,606 - -0.1 2,443,606 - +0.4 2,443,606 - -0.3 2,443,606 - +0.4 2,443,606 - -0.3 2,443,606 - +0.7
Or see this region's nucleotide sequence