Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11725

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11720 and A4249_RS11725 are separated by 170 nucleotidesA4249_RS11725 and A4249_RS11730 are separated by 115 nucleotidesA4249_RS11730 and A4249_RS11735 are separated by 30 nucleotides A4249_RS11720: A4249_RS11720 - strawberry notch C-terminal domain-containing protein, at 2,352,383 to 2,353,624 _RS11720 A4249_RS11725: A4249_RS11725 - hypothetical protein, at 2,353,795 to 2,354,100 _RS11725 A4249_RS11730: A4249_RS11730 - DUF305 domain-containing protein, at 2,354,216 to 2,354,653 _RS11730 A4249_RS11735: A4249_RS11735 - heavy metal translocating P-type ATPase, at 2,354,684 to 2,357,245 _RS11735 Position (kb) 2353 2354 2355Strain fitness (log2 ratio) -2 -1 0 1 2at 2353.523 kb on + strandat 2353.523 kb on + strandat 2353.524 kb on - strandat 2353.524 kb on - strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.638 kb on + strandat 2353.639 kb on - strandat 2353.723 kb on + strandat 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.897 kb on + strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.898 kb on - strand, within A4249_RS11725at 2353.955 kb on + strand, within A4249_RS11725at 2353.955 kb on + strand, within A4249_RS11725at 2353.956 kb on - strand, within A4249_RS11725at 2353.956 kb on - strand, within A4249_RS11725at 2353.956 kb on - strand, within A4249_RS11725at 2354.015 kb on + strand, within A4249_RS11725at 2354.016 kb on - strand, within A4249_RS11725at 2354.016 kb on - strand, within A4249_RS11725at 2354.126 kb on + strandat 2354.127 kb on - strandat 2354.128 kb on + strandat 2354.128 kb on + strandat 2354.128 kb on + strandat 2354.128 kb on + strandat 2354.128 kb on + strandat 2354.128 kb on + strandat 2354.129 kb on - strandat 2354.129 kb on - strandat 2354.129 kb on - strandat 2354.129 kb on - strandat 2354.129 kb on - strandat 2354.129 kb on - strandat 2354.129 kb on - strandat 2354.153 kb on + strandat 2354.154 kb on - strandat 2354.154 kb on - strandat 2354.269 kb on + strand, within A4249_RS11730at 2354.270 kb on - strand, within A4249_RS11730at 2354.270 kb on - strand, within A4249_RS11730at 2354.427 kb on + strand, within A4249_RS11730at 2354.427 kb on + strand, within A4249_RS11730at 2354.428 kb on - strand, within A4249_RS11730at 2354.440 kb on + strand, within A4249_RS11730at 2354.441 kb on - strand, within A4249_RS11730at 2354.472 kb on + strand, within A4249_RS11730at 2354.472 kb on + strand, within A4249_RS11730at 2354.472 kb on + strand, within A4249_RS11730at 2354.473 kb on - strand, within A4249_RS11730at 2354.473 kb on - strand, within A4249_RS11730at 2354.473 kb on - strand, within A4249_RS11730at 2354.473 kb on - strand, within A4249_RS11730at 2354.473 kb on - strand, within A4249_RS11730at 2354.473 kb on - strand, within A4249_RS11730at 2354.659 kb on + strandat 2354.659 kb on + strandat 2354.660 kb on - strandat 2354.660 kb on - strandat 2354.660 kb on - strandat 2354.660 kb on - strandat 2354.924 kb on + strandat 2354.924 kb on + strandat 2354.925 kb on - strandat 2354.925 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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2,353,523 + -0.6
2,353,523 + -0.3
2,353,524 - +2.0
2,353,524 - +0.0
2,353,638 + +0.9
2,353,638 + +0.2
2,353,638 + -0.1
2,353,638 + +0.1
2,353,638 + +0.1
2,353,638 + -0.3
2,353,638 + -0.1
2,353,638 + -0.2
2,353,639 - -0.0
2,353,723 + -0.7
2,353,897 + A4249_RS11725 0.33 +0.1
2,353,897 + A4249_RS11725 0.33 -0.4
2,353,897 + A4249_RS11725 0.33 +0.1
2,353,897 + A4249_RS11725 0.33 +0.8
2,353,897 + A4249_RS11725 0.33 +0.1
2,353,897 + A4249_RS11725 0.33 +0.5
2,353,897 + A4249_RS11725 0.33 +0.2
2,353,897 + A4249_RS11725 0.33 +0.3
2,353,897 + A4249_RS11725 0.33 -0.9
2,353,897 + A4249_RS11725 0.33 -0.6
2,353,897 + A4249_RS11725 0.33 +0.9
2,353,897 + A4249_RS11725 0.33 -0.4
2,353,897 + A4249_RS11725 0.33 +0.3
2,353,897 + A4249_RS11725 0.33 -0.7
2,353,897 + A4249_RS11725 0.33 -0.9
2,353,897 + A4249_RS11725 0.33 +0.2
2,353,898 - A4249_RS11725 0.34 +0.8
2,353,898 - A4249_RS11725 0.34 +0.5
2,353,898 - A4249_RS11725 0.34 +0.5
2,353,898 - A4249_RS11725 0.34 -0.6
2,353,898 - A4249_RS11725 0.34 -0.6
2,353,898 - A4249_RS11725 0.34 -0.5
2,353,898 - A4249_RS11725 0.34 -0.7
2,353,898 - A4249_RS11725 0.34 +0.2
2,353,898 - A4249_RS11725 0.34 -1.0
2,353,898 - A4249_RS11725 0.34 +0.3
2,353,898 - A4249_RS11725 0.34 -0.9
2,353,898 - A4249_RS11725 0.34 +0.1
2,353,898 - A4249_RS11725 0.34 -0.0
2,353,898 - A4249_RS11725 0.34 +0.6
2,353,898 - A4249_RS11725 0.34 +0.3
2,353,898 - A4249_RS11725 0.34 +0.6
2,353,898 - A4249_RS11725 0.34 -0.1
2,353,898 - A4249_RS11725 0.34 -0.5
2,353,898 - A4249_RS11725 0.34 -0.5
2,353,955 + A4249_RS11725 0.52 -1.5
2,353,955 + A4249_RS11725 0.52 -0.9
2,353,956 - A4249_RS11725 0.53 -0.1
2,353,956 - A4249_RS11725 0.53 +0.5
2,353,956 - A4249_RS11725 0.53 -0.2
2,354,015 + A4249_RS11725 0.72 -0.0
2,354,016 - A4249_RS11725 0.72 -0.1
2,354,016 - A4249_RS11725 0.72 -0.4
2,354,126 + -1.4
2,354,127 - -0.9
2,354,128 + +0.5
2,354,128 + +1.0
2,354,128 + +0.6
2,354,128 + +1.2
2,354,128 + -1.3
2,354,128 + +0.7
2,354,129 - -1.0
2,354,129 - -0.2
2,354,129 - -2.1
2,354,129 - +1.0
2,354,129 - +0.0
2,354,129 - -0.3
2,354,129 - +0.3
2,354,153 + +0.7
2,354,154 - -0.5
2,354,154 - -0.0
2,354,269 + A4249_RS11730 0.12 -0.6
2,354,270 - A4249_RS11730 0.12 +0.4
2,354,270 - A4249_RS11730 0.12 -0.2
2,354,427 + A4249_RS11730 0.48 +0.8
2,354,427 + A4249_RS11730 0.48 -0.1
2,354,428 - A4249_RS11730 0.48 +0.6
2,354,440 + A4249_RS11730 0.51 -0.1
2,354,441 - A4249_RS11730 0.51 +0.3
2,354,472 + A4249_RS11730 0.58 -0.2
2,354,472 + A4249_RS11730 0.58 +2.0
2,354,472 + A4249_RS11730 0.58 -0.2
2,354,473 - A4249_RS11730 0.59 +0.1
2,354,473 - A4249_RS11730 0.59 +0.0
2,354,473 - A4249_RS11730 0.59 +0.1
2,354,473 - A4249_RS11730 0.59 +0.2
2,354,473 - A4249_RS11730 0.59 +0.3
2,354,473 - A4249_RS11730 0.59 +0.6
2,354,659 + -0.6
2,354,659 + -0.2
2,354,660 - -0.4
2,354,660 - +0.2
2,354,660 - -0.6
2,354,660 - +1.1
2,354,924 + -0.6
2,354,924 + +0.4
2,354,925 - -0.5
2,354,925 - +0.5

Or see this region's nucleotide sequence