Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11635 and A4249_RS11640 are separated by 10 nucleotides A4249_RS11640 and A4249_RS11645 are separated by 386 nucleotides A4249_RS11645 and A4249_RS11650 are separated by 77 nucleotides A4249_RS11650 and A4249_RS16355 are separated by 12 nucleotides A4249_RS16355 and A4249_RS11660 are separated by 153 nucleotides
A4249_RS11635: A4249_RS11635 - IS3 family transposase, at 2,337,461 to 2,338,650
_RS11635
A4249_RS11640: A4249_RS11640 - hypothetical protein, at 2,338,661 to 2,338,867
_RS11640
A4249_RS11645: A4249_RS11645 - helix-turn-helix domain-containing protein, at 2,339,254 to 2,339,661
_RS11645
A4249_RS11650: A4249_RS11650 - mercuric transporter MerT family protein, at 2,339,739 to 2,340,134
_RS11650
A4249_RS16355: A4249_RS16355 - cation transporter, at 2,340,147 to 2,340,476
_RS16355
A4249_RS11660: A4249_RS11660 - mercury resistance system transport protein MerF, at 2,340,630 to 2,340,872
_RS11660
Position (kb)
2339
2340 Strain fitness (log2 ratio)
-2
-1
0
1 at 2338.626 kb on + strand at 2338.626 kb on + strand at 2338.785 kb on + strand, within A4249_RS11640 at 2338.785 kb on + strand, within A4249_RS11640 at 2338.785 kb on + strand, within A4249_RS11640 at 2338.785 kb on + strand, within A4249_RS11640 at 2338.785 kb on + strand, within A4249_RS11640 at 2338.785 kb on + strand, within A4249_RS11640 at 2338.786 kb on - strand, within A4249_RS11640 at 2338.786 kb on - strand, within A4249_RS11640 at 2338.786 kb on - strand, within A4249_RS11640 at 2338.836 kb on + strand, within A4249_RS11640 at 2338.871 kb on + strand at 2338.872 kb on - strand at 2338.882 kb on + strand at 2338.882 kb on + strand at 2338.882 kb on + strand at 2338.882 kb on + strand at 2338.883 kb on - strand at 2338.883 kb on - strand at 2338.889 kb on + strand at 2338.889 kb on + strand at 2338.890 kb on - strand at 2338.983 kb on + strand at 2338.984 kb on - strand at 2339.019 kb on - strand at 2339.019 kb on - strand at 2339.019 kb on - strand at 2339.116 kb on - strand at 2339.138 kb on + strand at 2339.138 kb on + strand at 2339.138 kb on + strand at 2339.138 kb on + strand at 2339.139 kb on - strand at 2339.139 kb on - strand at 2339.139 kb on - strand at 2339.139 kb on - strand at 2339.139 kb on - strand at 2339.195 kb on + strand at 2339.195 kb on + strand at 2339.195 kb on + strand at 2339.196 kb on - strand at 2339.196 kb on - strand at 2339.196 kb on - strand at 2339.196 kb on - strand at 2339.201 kb on + strand at 2339.201 kb on + strand at 2339.201 kb on + strand at 2339.201 kb on + strand at 2339.201 kb on + strand at 2339.201 kb on + strand at 2339.202 kb on - strand at 2339.202 kb on - strand at 2339.202 kb on - strand at 2339.202 kb on - strand at 2339.202 kb on - strand at 2339.202 kb on - strand at 2339.202 kb on - strand at 2339.232 kb on + strand at 2339.232 kb on + strand at 2339.232 kb on + strand at 2339.233 kb on - strand at 2339.233 kb on - strand at 2339.265 kb on + strand at 2339.265 kb on + strand at 2339.265 kb on + strand at 2339.265 kb on + strand at 2339.266 kb on - strand at 2339.266 kb on - strand at 2339.266 kb on - strand at 2339.528 kb on + strand, within A4249_RS11645 at 2339.528 kb on + strand, within A4249_RS11645 at 2339.529 kb on - strand, within A4249_RS11645 at 2339.529 kb on - strand, within A4249_RS11645 at 2339.585 kb on + strand, within A4249_RS11645 at 2339.585 kb on + strand, within A4249_RS11645 at 2339.586 kb on - strand, within A4249_RS11645 at 2339.588 kb on + strand, within A4249_RS11645 at 2339.589 kb on - strand, within A4249_RS11645 at 2339.589 kb on - strand, within A4249_RS11645 at 2339.682 kb on + strand at 2339.690 kb on - strand at 2339.698 kb on + strand at 2339.698 kb on + strand at 2339.699 kb on - strand at 2339.699 kb on - strand at 2339.734 kb on + strand at 2339.735 kb on - strand at 2339.735 kb on - strand at 2339.937 kb on + strand, within A4249_RS11650 at 2339.937 kb on + strand, within A4249_RS11650 at 2339.937 kb on + strand, within A4249_RS11650 at 2339.937 kb on + strand, within A4249_RS11650 at 2339.937 kb on + strand, within A4249_RS11650 at 2339.938 kb on - strand, within A4249_RS11650 at 2339.938 kb on - strand, within A4249_RS11650 at 2339.989 kb on - strand, within A4249_RS11650 at 2339.989 kb on - strand, within A4249_RS11650 at 2339.989 kb on - strand, within A4249_RS11650 at 2339.989 kb on - strand, within A4249_RS11650 at 2339.989 kb on - strand, within A4249_RS11650 at 2339.989 kb on - strand, within A4249_RS11650 at 2340.024 kb on + strand, within A4249_RS11650 at 2340.025 kb on - strand, within A4249_RS11650 at 2340.124 kb on - strand at 2340.130 kb on - strand at 2340.393 kb on + strand, within A4249_RS16355 at 2340.393 kb on + strand, within A4249_RS16355 at 2340.393 kb on + strand, within A4249_RS16355 at 2340.393 kb on + strand, within A4249_RS16355 at 2340.394 kb on - strand, within A4249_RS16355 at 2340.394 kb on - strand, within A4249_RS16355 at 2340.394 kb on - strand, within A4249_RS16355 at 2340.394 kb on - strand, within A4249_RS16355 at 2340.394 kb on - strand, within A4249_RS16355 at 2340.394 kb on - strand, within A4249_RS16355 at 2340.466 kb on + strand at 2340.466 kb on + strand at 2340.466 kb on + strand at 2340.467 kb on - strand at 2340.467 kb on - strand at 2340.467 kb on - strand at 2340.467 kb on - strand at 2340.474 kb on + strand at 2340.474 kb on + strand at 2340.475 kb on - strand at 2340.475 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,338,626 + +0.7 2,338,626 + +0.2 2,338,785 + A4249_RS11640 0.60 -0.4 2,338,785 + A4249_RS11640 0.60 +0.5 2,338,785 + A4249_RS11640 0.60 -0.1 2,338,785 + A4249_RS11640 0.60 +0.0 2,338,785 + A4249_RS11640 0.60 +1.0 2,338,785 + A4249_RS11640 0.60 -1.0 2,338,786 - A4249_RS11640 0.60 -1.1 2,338,786 - A4249_RS11640 0.60 -0.9 2,338,786 - A4249_RS11640 0.60 +0.0 2,338,836 + A4249_RS11640 0.85 +1.0 2,338,871 + +0.7 2,338,872 - -0.6 2,338,882 + +0.6 2,338,882 + -2.2 2,338,882 + -0.2 2,338,882 + -0.2 2,338,883 - +0.6 2,338,883 - -0.4 2,338,889 + -0.2 2,338,889 + +0.2 2,338,890 - +0.5 2,338,983 + -1.4 2,338,984 - -1.1 2,339,019 - -0.4 2,339,019 - +0.6 2,339,019 - -0.6 2,339,116 - -0.2 2,339,138 + -0.2 2,339,138 + +0.0 2,339,138 + -1.4 2,339,138 + +0.3 2,339,139 - +0.5 2,339,139 - -1.9 2,339,139 - +0.4 2,339,139 - -1.0 2,339,139 - -1.6 2,339,195 + -0.7 2,339,195 + -0.0 2,339,195 + -0.5 2,339,196 - +0.1 2,339,196 - +0.2 2,339,196 - +0.6 2,339,196 - -0.5 2,339,201 + -0.6 2,339,201 + -1.6 2,339,201 + +0.7 2,339,201 + +0.2 2,339,201 + +0.2 2,339,201 + +0.3 2,339,202 - -0.5 2,339,202 - +0.2 2,339,202 - -1.2 2,339,202 - -0.3 2,339,202 - +0.2 2,339,202 - +0.9 2,339,202 - -0.1 2,339,232 + +0.5 2,339,232 + -0.2 2,339,232 + -1.2 2,339,233 - -1.8 2,339,233 - -0.2 2,339,265 + -0.1 2,339,265 + +0.6 2,339,265 + -0.1 2,339,265 + -0.4 2,339,266 - -0.1 2,339,266 - +0.4 2,339,266 - -0.4 2,339,528 + A4249_RS11645 0.67 -0.0 2,339,528 + A4249_RS11645 0.67 -0.1 2,339,529 - A4249_RS11645 0.67 -0.4 2,339,529 - A4249_RS11645 0.67 +0.0 2,339,585 + A4249_RS11645 0.81 -0.9 2,339,585 + A4249_RS11645 0.81 +0.3 2,339,586 - A4249_RS11645 0.81 -0.9 2,339,588 + A4249_RS11645 0.82 -0.6 2,339,589 - A4249_RS11645 0.82 +0.1 2,339,589 - A4249_RS11645 0.82 -0.2 2,339,682 + -0.5 2,339,690 - -0.3 2,339,698 + -0.5 2,339,698 + -0.2 2,339,699 - -0.1 2,339,699 - +0.0 2,339,734 + +0.7 2,339,735 - +0.1 2,339,735 - -0.2 2,339,937 + A4249_RS11650 0.50 +1.0 2,339,937 + A4249_RS11650 0.50 -0.3 2,339,937 + A4249_RS11650 0.50 -0.4 2,339,937 + A4249_RS11650 0.50 -0.7 2,339,937 + A4249_RS11650 0.50 +0.0 2,339,938 - A4249_RS11650 0.50 +0.2 2,339,938 - A4249_RS11650 0.50 -0.0 2,339,989 - A4249_RS11650 0.63 -0.4 2,339,989 - A4249_RS11650 0.63 -0.0 2,339,989 - A4249_RS11650 0.63 +0.2 2,339,989 - A4249_RS11650 0.63 -0.5 2,339,989 - A4249_RS11650 0.63 -0.4 2,339,989 - A4249_RS11650 0.63 -0.3 2,340,024 + A4249_RS11650 0.72 -0.7 2,340,025 - A4249_RS11650 0.72 +0.8 2,340,124 - -0.6 2,340,130 - +0.5 2,340,393 + A4249_RS16355 0.75 +1.1 2,340,393 + A4249_RS16355 0.75 -0.7 2,340,393 + A4249_RS16355 0.75 -0.6 2,340,393 + A4249_RS16355 0.75 -0.2 2,340,394 - A4249_RS16355 0.75 +1.3 2,340,394 - A4249_RS16355 0.75 -0.1 2,340,394 - A4249_RS16355 0.75 +0.9 2,340,394 - A4249_RS16355 0.75 +0.5 2,340,394 - A4249_RS16355 0.75 -0.0 2,340,394 - A4249_RS16355 0.75 +0.3 2,340,466 + +0.9 2,340,466 + -0.8 2,340,466 + -1.2 2,340,467 - +0.6 2,340,467 - -0.4 2,340,467 - +0.1 2,340,467 - +0.4 2,340,474 + -0.0 2,340,474 + -1.1 2,340,475 - +0.3 2,340,475 - -0.7
Or see this region's nucleotide sequence