Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11570

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11565 and A4249_RS11570 are separated by 12 nucleotidesA4249_RS11570 and A4249_RS11575 overlap by 4 nucleotidesA4249_RS11575 and A4249_RS11580 are separated by 29 nucleotidesA4249_RS11580 and A4249_RS11585 overlap by 4 nucleotides A4249_RS11565: A4249_RS11565 - MBL fold metallo-hydrolase, at 2,326,797 to 2,327,738 _RS11565 A4249_RS11570: A4249_RS11570 - YeeE/YedE thiosulfate transporter family protein, at 2,327,751 to 2,328,185 _RS11570 A4249_RS11575: A4249_RS11575 - YeeE/YedE family protein, at 2,328,182 to 2,328,601 _RS11575 A4249_RS11580: A4249_RS11580 - TIGR01244 family sulfur transferase, at 2,328,631 to 2,329,053 _RS11580 A4249_RS11585: A4249_RS11585 - FAD/NAD(P)-binding oxidoreductase, at 2,329,050 to 2,330,327 _RS11585 Position (kb) 2327 2328 2329Strain fitness (log2 ratio) -1 0 1 2at 2326.766 kb on - strandat 2326.980 kb on + strand, within A4249_RS11565at 2326.980 kb on + strand, within A4249_RS11565at 2326.980 kb on + strand, within A4249_RS11565at 2326.980 kb on + strand, within A4249_RS11565at 2326.981 kb on - strand, within A4249_RS11565at 2327.034 kb on + strand, within A4249_RS11565at 2327.035 kb on - strand, within A4249_RS11565at 2327.039 kb on - strand, within A4249_RS11565at 2327.039 kb on - strand, within A4249_RS11565at 2327.113 kb on - strand, within A4249_RS11565at 2327.113 kb on - strand, within A4249_RS11565at 2327.325 kb on + strand, within A4249_RS11565at 2327.325 kb on + strand, within A4249_RS11565at 2327.325 kb on + strand, within A4249_RS11565at 2327.326 kb on - strand, within A4249_RS11565at 2327.326 kb on - strand, within A4249_RS11565at 2327.326 kb on - strand, within A4249_RS11565at 2327.326 kb on - strand, within A4249_RS11565at 2327.425 kb on - strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.487 kb on + strand, within A4249_RS11565at 2327.488 kb on - strand, within A4249_RS11565at 2327.488 kb on - strand, within A4249_RS11565at 2327.488 kb on - strand, within A4249_RS11565at 2327.488 kb on - strand, within A4249_RS11565at 2327.488 kb on - strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.555 kb on + strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.556 kb on - strand, within A4249_RS11565at 2327.562 kb on - strand, within A4249_RS11565at 2327.562 kb on - strand, within A4249_RS11565at 2327.710 kb on - strandat 2327.710 kb on - strandat 2327.820 kb on + strand, within A4249_RS11570at 2327.820 kb on + strand, within A4249_RS11570at 2327.820 kb on + strand, within A4249_RS11570at 2327.821 kb on - strand, within A4249_RS11570at 2327.821 kb on - strand, within A4249_RS11570at 2327.821 kb on - strand, within A4249_RS11570at 2327.821 kb on - strand, within A4249_RS11570at 2327.821 kb on - strand, within A4249_RS11570at 2327.821 kb on - strand, within A4249_RS11570at 2328.353 kb on + strand, within A4249_RS11575at 2328.354 kb on - strand, within A4249_RS11575at 2328.354 kb on - strand, within A4249_RS11575at 2328.616 kb on + strandat 2328.616 kb on + strandat 2328.616 kb on + strandat 2329.006 kb on + strand, within A4249_RS11580at 2329.062 kb on + strandat 2329.062 kb on + strandat 2329.063 kb on - strandat 2329.063 kb on - strandat 2329.063 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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2,326,766 - +1.0
2,326,980 + A4249_RS11565 0.19 +1.5
2,326,980 + A4249_RS11565 0.19 +1.0
2,326,980 + A4249_RS11565 0.19 -0.2
2,326,980 + A4249_RS11565 0.19 +0.0
2,326,981 - A4249_RS11565 0.20 -1.2
2,327,034 + A4249_RS11565 0.25 +0.1
2,327,035 - A4249_RS11565 0.25 -0.1
2,327,039 - A4249_RS11565 0.26 +0.6
2,327,039 - A4249_RS11565 0.26 -0.6
2,327,113 - A4249_RS11565 0.34 -1.2
2,327,113 - A4249_RS11565 0.34 -1.0
2,327,325 + A4249_RS11565 0.56 +0.1
2,327,325 + A4249_RS11565 0.56 +0.1
2,327,325 + A4249_RS11565 0.56 +0.1
2,327,326 - A4249_RS11565 0.56 -0.2
2,327,326 - A4249_RS11565 0.56 -0.3
2,327,326 - A4249_RS11565 0.56 +1.4
2,327,326 - A4249_RS11565 0.56 +1.3
2,327,425 - A4249_RS11565 0.67 +0.4
2,327,487 + A4249_RS11565 0.73 +0.3
2,327,487 + A4249_RS11565 0.73 -0.7
2,327,487 + A4249_RS11565 0.73 -1.1
2,327,487 + A4249_RS11565 0.73 -0.6
2,327,487 + A4249_RS11565 0.73 -0.1
2,327,487 + A4249_RS11565 0.73 -0.3
2,327,487 + A4249_RS11565 0.73 +0.2
2,327,488 - A4249_RS11565 0.73 +0.2
2,327,488 - A4249_RS11565 0.73 +1.7
2,327,488 - A4249_RS11565 0.73 +2.2
2,327,488 - A4249_RS11565 0.73 +0.8
2,327,488 - A4249_RS11565 0.73 +0.2
2,327,555 + A4249_RS11565 0.80 +1.1
2,327,555 + A4249_RS11565 0.80 +0.9
2,327,555 + A4249_RS11565 0.80 +0.1
2,327,555 + A4249_RS11565 0.80 -0.9
2,327,555 + A4249_RS11565 0.80 +0.3
2,327,555 + A4249_RS11565 0.80 -0.3
2,327,555 + A4249_RS11565 0.80 +1.4
2,327,555 + A4249_RS11565 0.80 -0.1
2,327,555 + A4249_RS11565 0.80 -0.1
2,327,555 + A4249_RS11565 0.80 -0.3
2,327,556 - A4249_RS11565 0.81 -0.4
2,327,556 - A4249_RS11565 0.81 +0.0
2,327,556 - A4249_RS11565 0.81 +0.5
2,327,556 - A4249_RS11565 0.81 -1.1
2,327,556 - A4249_RS11565 0.81 +0.2
2,327,556 - A4249_RS11565 0.81 +0.6
2,327,556 - A4249_RS11565 0.81 +0.1
2,327,562 - A4249_RS11565 0.81 +0.1
2,327,562 - A4249_RS11565 0.81 +0.5
2,327,710 - -0.2
2,327,710 - -0.4
2,327,820 + A4249_RS11570 0.16 -0.1
2,327,820 + A4249_RS11570 0.16 +0.6
2,327,820 + A4249_RS11570 0.16 -0.5
2,327,821 - A4249_RS11570 0.16 +0.1
2,327,821 - A4249_RS11570 0.16 +0.5
2,327,821 - A4249_RS11570 0.16 -0.3
2,327,821 - A4249_RS11570 0.16 +1.2
2,327,821 - A4249_RS11570 0.16 +0.2
2,327,821 - A4249_RS11570 0.16 -0.4
2,328,353 + A4249_RS11575 0.41 +0.5
2,328,354 - A4249_RS11575 0.41 +0.1
2,328,354 - A4249_RS11575 0.41 -0.7
2,328,616 + +0.1
2,328,616 + -0.1
2,328,616 + +0.1
2,329,006 + A4249_RS11580 0.89 -0.5
2,329,062 + -0.3
2,329,062 + -0.4
2,329,063 - -0.7
2,329,063 - +0.5
2,329,063 - -0.3

Or see this region's nucleotide sequence