Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10015

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10010 and A4249_RS10015 overlap by 1 nucleotidesA4249_RS10015 and A4249_RS10020 are separated by 1 nucleotides A4249_RS10010: A4249_RS10010 - 2-isopropylmalate synthase, at 2,009,203 to 2,010,453 _RS10010 A4249_RS10015: A4249_RS10015 - ACT domain-containing protein, at 2,010,453 to 2,010,704 _RS10015 A4249_RS10020: A4249_RS10020 - acetolactate synthase 2 catalytic subunit, at 2,010,706 to 2,012,418 _RS10020 Position (kb) 2010 2011Strain fitness (log2 ratio) -2 -1 0 1at 2009.453 kb on + strand, within A4249_RS10010at 2009.453 kb on + strand, within A4249_RS10010at 2009.453 kb on + strand, within A4249_RS10010at 2009.453 kb on + strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.454 kb on - strand, within A4249_RS10010at 2009.621 kb on + strand, within A4249_RS10010at 2010.005 kb on + strand, within A4249_RS10010at 2010.005 kb on + strand, within A4249_RS10010at 2010.005 kb on + strand, within A4249_RS10010at 2010.418 kb on + strandat 2010.427 kb on + strandat 2010.434 kb on - strandat 2010.434 kb on - strandat 2010.447 kb on + strandat 2010.932 kb on + strand, within A4249_RS10020at 2010.932 kb on + strand, within A4249_RS10020at 2010.932 kb on + strand, within A4249_RS10020at 2010.933 kb on - strand, within A4249_RS10020at 2010.933 kb on - strand, within A4249_RS10020at 2011.292 kb on + strand, within A4249_RS10020at 2011.292 kb on + strand, within A4249_RS10020at 2011.292 kb on + strand, within A4249_RS10020at 2011.292 kb on + strand, within A4249_RS10020at 2011.292 kb on + strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020at 2011.293 kb on - strand, within A4249_RS10020

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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2,009,453 + A4249_RS10010 0.20 +0.3
2,009,453 + A4249_RS10010 0.20 +0.2
2,009,453 + A4249_RS10010 0.20 +0.1
2,009,453 + A4249_RS10010 0.20 +0.4
2,009,454 - A4249_RS10010 0.20 -0.7
2,009,454 - A4249_RS10010 0.20 -0.5
2,009,454 - A4249_RS10010 0.20 -1.0
2,009,454 - A4249_RS10010 0.20 +0.4
2,009,454 - A4249_RS10010 0.20 -0.5
2,009,454 - A4249_RS10010 0.20 +0.2
2,009,454 - A4249_RS10010 0.20 +0.2
2,009,454 - A4249_RS10010 0.20 -1.9
2,009,621 + A4249_RS10010 0.33 +0.5
2,010,005 + A4249_RS10010 0.64 -0.6
2,010,005 + A4249_RS10010 0.64 -0.4
2,010,005 + A4249_RS10010 0.64 +0.5
2,010,418 + -0.4
2,010,427 + +0.2
2,010,434 - +0.7
2,010,434 - -0.3
2,010,447 + -0.5
2,010,932 + A4249_RS10020 0.13 +0.3
2,010,932 + A4249_RS10020 0.13 -0.1
2,010,932 + A4249_RS10020 0.13 +0.1
2,010,933 - A4249_RS10020 0.13 +1.1
2,010,933 - A4249_RS10020 0.13 +0.7
2,011,292 + A4249_RS10020 0.34 -0.8
2,011,292 + A4249_RS10020 0.34 -0.0
2,011,292 + A4249_RS10020 0.34 -0.8
2,011,292 + A4249_RS10020 0.34 -0.3
2,011,292 + A4249_RS10020 0.34 -0.6
2,011,293 - A4249_RS10020 0.34 +1.1
2,011,293 - A4249_RS10020 0.34 +0.8
2,011,293 - A4249_RS10020 0.34 -0.6
2,011,293 - A4249_RS10020 0.34 +0.7
2,011,293 - A4249_RS10020 0.34 -0.2
2,011,293 - A4249_RS10020 0.34 +0.3
2,011,293 - A4249_RS10020 0.34 -0.4
2,011,293 - A4249_RS10020 0.34 -0.1

Or see this region's nucleotide sequence