Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09660

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09655 and A4249_RS09660 are separated by 36 nucleotidesA4249_RS09660 and A4249_RS09665 overlap by 14 nucleotides A4249_RS09655: A4249_RS09655 - cysteine synthase A, at 1,925,035 to 1,926,033 _RS09655 A4249_RS09660: A4249_RS09660 - phosphoadenylyl-sulfate reductase, at 1,926,070 to 1,927,146 _RS09660 A4249_RS09665: A4249_RS09665 - nitrite/sulfite reductase, at 1,927,133 to 1,928,800 _RS09665 Position (kb) 1926 1927 1928Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.142 kb on + strand, within A4249_RS09655at 1925.143 kb on - strand, within A4249_RS09655at 1925.143 kb on - strand, within A4249_RS09655at 1925.143 kb on - strand, within A4249_RS09655at 1925.143 kb on - strand, within A4249_RS09655at 1925.143 kb on - strand, within A4249_RS09655at 1925.143 kb on - strand, within A4249_RS09655at 1925.274 kb on - strand, within A4249_RS09655at 1925.279 kb on + strand, within A4249_RS09655at 1925.279 kb on + strand, within A4249_RS09655at 1925.279 kb on + strand, within A4249_RS09655at 1925.280 kb on - strand, within A4249_RS09655at 1925.280 kb on - strand, within A4249_RS09655at 1925.280 kb on - strand, within A4249_RS09655at 1925.448 kb on - strand, within A4249_RS09655at 1925.448 kb on - strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.549 kb on + strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.550 kb on - strand, within A4249_RS09655at 1925.645 kb on + strand, within A4249_RS09655at 1925.645 kb on + strand, within A4249_RS09655at 1925.645 kb on + strand, within A4249_RS09655at 1925.646 kb on - strand, within A4249_RS09655at 1925.646 kb on - strand, within A4249_RS09655at 1925.668 kb on - strand, within A4249_RS09655at 1925.668 kb on - strand, within A4249_RS09655at 1925.839 kb on - strand, within A4249_RS09655at 1925.839 kb on - strand, within A4249_RS09655at 1925.839 kb on - strand, within A4249_RS09655at 1925.994 kb on + strandat 1925.994 kb on + strandat 1925.995 kb on - strandat 1925.995 kb on - strandat 1925.995 kb on - strandat 1925.995 kb on - strandat 1926.024 kb on + strandat 1926.025 kb on - strandat 1926.025 kb on - strandat 1926.094 kb on + strandat 1926.094 kb on + strandat 1926.095 kb on - strandat 1926.200 kb on + strand, within A4249_RS09660at 1926.200 kb on + strand, within A4249_RS09660at 1926.201 kb on - strand, within A4249_RS09660at 1926.201 kb on - strand, within A4249_RS09660at 1926.201 kb on - strand, within A4249_RS09660at 1926.357 kb on + strand, within A4249_RS09660at 1926.357 kb on + strand, within A4249_RS09660at 1926.357 kb on + strand, within A4249_RS09660at 1926.358 kb on - strand, within A4249_RS09660at 1926.358 kb on - strand, within A4249_RS09660at 1926.358 kb on - strand, within A4249_RS09660at 1926.358 kb on - strand, within A4249_RS09660at 1926.358 kb on - strand, within A4249_RS09660at 1926.548 kb on + strand, within A4249_RS09660at 1926.549 kb on - strand, within A4249_RS09660at 1926.836 kb on + strand, within A4249_RS09660at 1926.837 kb on - strand, within A4249_RS09660at 1926.980 kb on + strand, within A4249_RS09660at 1927.090 kb on + strandat 1927.091 kb on - strandat 1927.091 kb on - strandat 1927.126 kb on + strandat 1927.126 kb on + strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.127 kb on - strandat 1927.128 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.158 kb on + strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.159 kb on - strandat 1927.239 kb on + strandat 1927.239 kb on + strandat 1927.353 kb on + strand, within A4249_RS09665at 1927.353 kb on + strand, within A4249_RS09665at 1927.353 kb on + strand, within A4249_RS09665at 1927.354 kb on - strand, within A4249_RS09665at 1927.354 kb on - strand, within A4249_RS09665at 1927.354 kb on - strand, within A4249_RS09665at 1927.354 kb on - strand, within A4249_RS09665at 1927.354 kb on - strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.356 kb on + strand, within A4249_RS09665at 1927.357 kb on - strand, within A4249_RS09665at 1927.357 kb on - strand, within A4249_RS09665at 1927.357 kb on - strand, within A4249_RS09665at 1927.357 kb on - strand, within A4249_RS09665at 1927.357 kb on - strand, within A4249_RS09665at 1927.438 kb on + strand, within A4249_RS09665at 1927.438 kb on + strand, within A4249_RS09665at 1927.438 kb on + strand, within A4249_RS09665at 1927.438 kb on + strand, within A4249_RS09665at 1927.438 kb on + strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.439 kb on - strand, within A4249_RS09665at 1927.470 kb on + strand, within A4249_RS09665at 1927.471 kb on - strand, within A4249_RS09665at 1927.542 kb on + strand, within A4249_RS09665at 1927.542 kb on + strand, within A4249_RS09665at 1927.542 kb on + strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.543 kb on - strand, within A4249_RS09665at 1927.677 kb on + strand, within A4249_RS09665at 1927.678 kb on - strand, within A4249_RS09665at 1927.678 kb on - strand, within A4249_RS09665at 1927.704 kb on + strand, within A4249_RS09665at 1927.705 kb on - strand, within A4249_RS09665at 1927.705 kb on - strand, within A4249_RS09665at 1927.800 kb on + strand, within A4249_RS09665at 1927.801 kb on - strand, within A4249_RS09665at 1927.926 kb on + strand, within A4249_RS09665at 1927.926 kb on + strand, within A4249_RS09665at 1927.926 kb on + strand, within A4249_RS09665at 1927.989 kb on + strand, within A4249_RS09665at 1927.989 kb on + strand, within A4249_RS09665at 1927.989 kb on + strand, within A4249_RS09665at 1927.989 kb on + strand, within A4249_RS09665at 1927.989 kb on + strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1927.990 kb on - strand, within A4249_RS09665at 1928.027 kb on + strand, within A4249_RS09665at 1928.116 kb on - strand, within A4249_RS09665at 1928.116 kb on - strand, within A4249_RS09665at 1928.116 kb on - strand, within A4249_RS09665

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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1,925,142 + A4249_RS09655 0.11 +0.1
1,925,142 + A4249_RS09655 0.11 -0.2
1,925,142 + A4249_RS09655 0.11 +0.2
1,925,142 + A4249_RS09655 0.11 -0.9
1,925,142 + A4249_RS09655 0.11 -0.2
1,925,142 + A4249_RS09655 0.11 +0.3
1,925,142 + A4249_RS09655 0.11 +0.5
1,925,142 + A4249_RS09655 0.11 -0.3
1,925,143 - A4249_RS09655 0.11 -0.1
1,925,143 - A4249_RS09655 0.11 +0.3
1,925,143 - A4249_RS09655 0.11 +1.2
1,925,143 - A4249_RS09655 0.11 -0.3
1,925,143 - A4249_RS09655 0.11 -0.0
1,925,143 - A4249_RS09655 0.11 +0.2
1,925,274 - A4249_RS09655 0.24 -1.6
1,925,279 + A4249_RS09655 0.24 -0.2
1,925,279 + A4249_RS09655 0.24 -0.3
1,925,279 + A4249_RS09655 0.24 -0.7
1,925,280 - A4249_RS09655 0.25 +0.6
1,925,280 - A4249_RS09655 0.25 -1.1
1,925,280 - A4249_RS09655 0.25 -0.4
1,925,448 - A4249_RS09655 0.41 +0.4
1,925,448 - A4249_RS09655 0.41 -0.4
1,925,549 + A4249_RS09655 0.51 +0.3
1,925,549 + A4249_RS09655 0.51 -0.3
1,925,549 + A4249_RS09655 0.51 -0.1
1,925,549 + A4249_RS09655 0.51 -0.1
1,925,549 + A4249_RS09655 0.51 +0.3
1,925,549 + A4249_RS09655 0.51 -0.3
1,925,549 + A4249_RS09655 0.51 -0.5
1,925,549 + A4249_RS09655 0.51 -0.2
1,925,549 + A4249_RS09655 0.51 -0.5
1,925,549 + A4249_RS09655 0.51 +0.9
1,925,549 + A4249_RS09655 0.51 -0.3
1,925,549 + A4249_RS09655 0.51 -0.3
1,925,549 + A4249_RS09655 0.51 -0.1
1,925,550 - A4249_RS09655 0.52 -0.2
1,925,550 - A4249_RS09655 0.52 -0.1
1,925,550 - A4249_RS09655 0.52 -0.0
1,925,550 - A4249_RS09655 0.52 +0.1
1,925,550 - A4249_RS09655 0.52 -0.3
1,925,550 - A4249_RS09655 0.52 -0.2
1,925,550 - A4249_RS09655 0.52 -0.6
1,925,645 + A4249_RS09655 0.61 -0.3
1,925,645 + A4249_RS09655 0.61 -0.1
1,925,645 + A4249_RS09655 0.61 +0.4
1,925,646 - A4249_RS09655 0.61 -0.3
1,925,646 - A4249_RS09655 0.61 +0.1
1,925,668 - A4249_RS09655 0.63 +0.2
1,925,668 - A4249_RS09655 0.63 -0.2
1,925,839 - A4249_RS09655 0.80 +0.4
1,925,839 - A4249_RS09655 0.80 +0.7
1,925,839 - A4249_RS09655 0.80 -0.5
1,925,994 + -0.0
1,925,994 + -0.3
1,925,995 - -0.3
1,925,995 - -0.5
1,925,995 - +0.1
1,925,995 - -0.1
1,926,024 + -0.5
1,926,025 - -0.7
1,926,025 - -1.4
1,926,094 + -0.2
1,926,094 + -1.1
1,926,095 - +0.7
1,926,200 + A4249_RS09660 0.12 +0.2
1,926,200 + A4249_RS09660 0.12 +0.6
1,926,201 - A4249_RS09660 0.12 -1.4
1,926,201 - A4249_RS09660 0.12 -0.9
1,926,201 - A4249_RS09660 0.12 +0.4
1,926,357 + A4249_RS09660 0.27 +0.2
1,926,357 + A4249_RS09660 0.27 -0.8
1,926,357 + A4249_RS09660 0.27 -0.2
1,926,358 - A4249_RS09660 0.27 -0.6
1,926,358 - A4249_RS09660 0.27 -1.3
1,926,358 - A4249_RS09660 0.27 +0.1
1,926,358 - A4249_RS09660 0.27 +0.5
1,926,358 - A4249_RS09660 0.27 -0.7
1,926,548 + A4249_RS09660 0.44 -1.1
1,926,549 - A4249_RS09660 0.44 +1.3
1,926,836 + A4249_RS09660 0.71 -0.2
1,926,837 - A4249_RS09660 0.71 -0.7
1,926,980 + A4249_RS09660 0.84 -1.2
1,927,090 + -0.6
1,927,091 - -0.1
1,927,091 - +0.1
1,927,126 + +1.1
1,927,126 + -1.7
1,927,127 - +0.7
1,927,127 - -0.6
1,927,127 - +0.5
1,927,127 - +0.8
1,927,127 - +0.7
1,927,127 - -0.1
1,927,127 - +1.5
1,927,127 - +0.1
1,927,128 + -0.1
1,927,158 + -1.1
1,927,158 + -0.3
1,927,158 + -0.5
1,927,158 + +0.1
1,927,158 + -0.9
1,927,158 + +0.0
1,927,158 + +0.6
1,927,158 + -0.3
1,927,158 + +1.0
1,927,158 + +0.1
1,927,158 + -1.1
1,927,159 - -0.7
1,927,159 - -0.1
1,927,159 - -0.1
1,927,159 - -0.1
1,927,159 - -1.7
1,927,159 - +0.1
1,927,159 - +0.0
1,927,159 - -0.2
1,927,159 - +0.1
1,927,159 - +0.6
1,927,239 + -0.5
1,927,239 + -0.0
1,927,353 + A4249_RS09665 0.13 +0.5
1,927,353 + A4249_RS09665 0.13 +0.2
1,927,353 + A4249_RS09665 0.13 -0.7
1,927,354 - A4249_RS09665 0.13 -0.1
1,927,354 - A4249_RS09665 0.13 -0.1
1,927,354 - A4249_RS09665 0.13 -2.1
1,927,354 - A4249_RS09665 0.13 -0.0
1,927,354 - A4249_RS09665 0.13 +0.3
1,927,356 + A4249_RS09665 0.13 -0.5
1,927,356 + A4249_RS09665 0.13 -1.0
1,927,356 + A4249_RS09665 0.13 +0.3
1,927,356 + A4249_RS09665 0.13 -0.1
1,927,356 + A4249_RS09665 0.13 +0.2
1,927,356 + A4249_RS09665 0.13 +1.2
1,927,356 + A4249_RS09665 0.13 -0.3
1,927,356 + A4249_RS09665 0.13 +0.5
1,927,356 + A4249_RS09665 0.13 -0.1
1,927,357 - A4249_RS09665 0.13 -0.1
1,927,357 - A4249_RS09665 0.13 -1.1
1,927,357 - A4249_RS09665 0.13 +0.0
1,927,357 - A4249_RS09665 0.13 -0.3
1,927,357 - A4249_RS09665 0.13 -0.1
1,927,438 + A4249_RS09665 0.18 +0.3
1,927,438 + A4249_RS09665 0.18 -0.2
1,927,438 + A4249_RS09665 0.18 +1.3
1,927,438 + A4249_RS09665 0.18 -2.8
1,927,438 + A4249_RS09665 0.18 -0.4
1,927,439 - A4249_RS09665 0.18 +0.0
1,927,439 - A4249_RS09665 0.18 +0.3
1,927,439 - A4249_RS09665 0.18 +0.1
1,927,439 - A4249_RS09665 0.18 +0.8
1,927,439 - A4249_RS09665 0.18 +0.3
1,927,439 - A4249_RS09665 0.18 -1.1
1,927,439 - A4249_RS09665 0.18 -0.7
1,927,470 + A4249_RS09665 0.20 +0.2
1,927,471 - A4249_RS09665 0.20 -1.1
1,927,542 + A4249_RS09665 0.25 -0.7
1,927,542 + A4249_RS09665 0.25 +2.2
1,927,542 + A4249_RS09665 0.25 +1.1
1,927,543 - A4249_RS09665 0.25 +0.6
1,927,543 - A4249_RS09665 0.25 +0.5
1,927,543 - A4249_RS09665 0.25 +0.3
1,927,543 - A4249_RS09665 0.25 -0.6
1,927,543 - A4249_RS09665 0.25 +0.5
1,927,543 - A4249_RS09665 0.25 +0.2
1,927,543 - A4249_RS09665 0.25 -0.3
1,927,677 + A4249_RS09665 0.33 +0.5
1,927,678 - A4249_RS09665 0.33 +0.2
1,927,678 - A4249_RS09665 0.33 +0.3
1,927,704 + A4249_RS09665 0.34 -0.5
1,927,705 - A4249_RS09665 0.34 +0.2
1,927,705 - A4249_RS09665 0.34 +1.0
1,927,800 + A4249_RS09665 0.40 +1.2
1,927,801 - A4249_RS09665 0.40 +0.5
1,927,926 + A4249_RS09665 0.48 -0.5
1,927,926 + A4249_RS09665 0.48 -2.2
1,927,926 + A4249_RS09665 0.48 -0.5
1,927,989 + A4249_RS09665 0.51 +0.3
1,927,989 + A4249_RS09665 0.51 +0.3
1,927,989 + A4249_RS09665 0.51 -0.3
1,927,989 + A4249_RS09665 0.51 -0.5
1,927,989 + A4249_RS09665 0.51 +0.0
1,927,990 - A4249_RS09665 0.51 -0.8
1,927,990 - A4249_RS09665 0.51 -0.8
1,927,990 - A4249_RS09665 0.51 -1.0
1,927,990 - A4249_RS09665 0.51 +0.1
1,927,990 - A4249_RS09665 0.51 -0.0
1,927,990 - A4249_RS09665 0.51 -0.6
1,927,990 - A4249_RS09665 0.51 +0.3
1,928,027 + A4249_RS09665 0.54 +0.4
1,928,116 - A4249_RS09665 0.59 -0.3
1,928,116 - A4249_RS09665 0.59 -0.8
1,928,116 - A4249_RS09665 0.59 -0.7

Or see this region's nucleotide sequence