Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08335 and A4249_RS08340 are separated by 2 nucleotides A4249_RS08340 and A4249_RS08345 are separated by 126 nucleotides A4249_RS08345 and A4249_RS08350 are separated by 75 nucleotides A4249_RS08350 and A4249_RS08355 overlap by 4 nucleotides A4249_RS08355 and A4249_RS08360 are separated by 106 nucleotides
A4249_RS08335: A4249_RS08335 - DUF5990 family protein, at 1,674,163 to 1,674,576
_RS08335
A4249_RS08340: A4249_RS08340 - hypothetical protein, at 1,674,579 to 1,675,145
_RS08340
A4249_RS08345: A4249_RS08345 - 50S ribosomal protein L33, at 1,675,272 to 1,675,439
_RS08345
A4249_RS08350: A4249_RS08350 - PleD family two-component system response regulator, at 1,675,515 to 1,676,876
_RS08350
A4249_RS08355: A4249_RS08355 - response regulator, at 1,676,873 to 1,677,238
_RS08355
A4249_RS08360: A4249_RS08360 - DNA polymerase IV, at 1,677,345 to 1,678,613
_RS08360
Position (kb) 1675
1676
1677 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1674.545 kb on + strand at 1674.546 kb on - strand at 1674.546 kb on - strand at 1674.647 kb on - strand, within A4249_RS08340 at 1674.723 kb on + strand, within A4249_RS08340 at 1674.723 kb on + strand, within A4249_RS08340 at 1674.724 kb on - strand, within A4249_RS08340 at 1674.796 kb on + strand, within A4249_RS08340 at 1674.797 kb on - strand, within A4249_RS08340 at 1674.797 kb on - strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.917 kb on + strand, within A4249_RS08340 at 1674.918 kb on - strand, within A4249_RS08340 at 1674.918 kb on - strand, within A4249_RS08340 at 1674.918 kb on - strand, within A4249_RS08340 at 1674.918 kb on - strand, within A4249_RS08340 at 1675.156 kb on + strand at 1675.156 kb on + strand at 1675.156 kb on + strand at 1675.156 kb on + strand at 1675.156 kb on + strand at 1675.156 kb on + strand at 1675.157 kb on - strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.158 kb on + strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.159 kb on - strand at 1675.437 kb on + strand at 1675.437 kb on + strand at 1675.438 kb on - strand at 1675.438 kb on - strand at 1675.438 kb on - strand at 1675.564 kb on + strand at 1675.564 kb on + strand at 1675.564 kb on + strand at 1675.564 kb on + strand at 1675.565 kb on - strand at 1675.565 kb on - strand at 1675.565 kb on - strand at 1675.605 kb on - strand at 1675.605 kb on - strand at 1675.975 kb on + strand, within A4249_RS08350 at 1675.975 kb on + strand, within A4249_RS08350 at 1675.975 kb on + strand, within A4249_RS08350 at 1675.975 kb on + strand, within A4249_RS08350 at 1675.975 kb on + strand, within A4249_RS08350 at 1675.975 kb on + strand, within A4249_RS08350 at 1675.976 kb on - strand, within A4249_RS08350 at 1675.976 kb on - strand, within A4249_RS08350 at 1675.976 kb on - strand, within A4249_RS08350 at 1676.059 kb on + strand, within A4249_RS08350 at 1676.060 kb on - strand, within A4249_RS08350 at 1676.060 kb on - strand, within A4249_RS08350 at 1676.648 kb on + strand, within A4249_RS08350 at 1676.649 kb on - strand, within A4249_RS08350 at 1676.649 kb on - strand, within A4249_RS08350 at 1676.797 kb on + strand at 1676.797 kb on + strand at 1676.797 kb on + strand at 1676.797 kb on + strand at 1676.798 kb on - strand at 1676.798 kb on - strand at 1676.798 kb on - strand at 1676.798 kb on - strand at 1676.798 kb on - strand at 1676.800 kb on + strand at 1676.800 kb on + strand at 1676.800 kb on + strand at 1676.801 kb on - strand at 1676.801 kb on - strand at 1676.864 kb on + strand at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.932 kb on + strand, within A4249_RS08355 at 1676.933 kb on - strand, within A4249_RS08355 at 1676.933 kb on - strand, within A4249_RS08355 at 1676.933 kb on - strand, within A4249_RS08355 at 1676.933 kb on - strand, within A4249_RS08355 at 1676.933 kb on - strand, within A4249_RS08355 at 1676.933 kb on - strand, within A4249_RS08355 at 1676.934 kb on + strand, within A4249_RS08355 at 1676.934 kb on + strand, within A4249_RS08355 at 1676.934 kb on + strand, within A4249_RS08355 at 1676.934 kb on + strand, within A4249_RS08355 at 1676.934 kb on + strand, within A4249_RS08355 at 1676.934 kb on + strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.935 kb on - strand, within A4249_RS08355 at 1676.958 kb on - strand, within A4249_RS08355 at 1677.159 kb on + strand, within A4249_RS08355 at 1677.160 kb on - strand, within A4249_RS08355 at 1677.307 kb on + strand at 1677.307 kb on + strand at 1677.307 kb on + strand at 1677.308 kb on - strand at 1677.308 kb on - strand at 1677.308 kb on - strand at 1677.308 kb on - strand at 1677.308 kb on - strand at 1677.308 kb on - strand at 1677.330 kb on - strand at 1677.340 kb on + strand at 1677.340 kb on + strand at 1677.341 kb on - strand at 1677.341 kb on - strand at 1677.448 kb on + strand at 1677.449 kb on - strand at 1677.501 kb on + strand, within A4249_RS08360 at 1677.501 kb on + strand, within A4249_RS08360 at 1677.501 kb on + strand, within A4249_RS08360 at 1677.501 kb on + strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.502 kb on - strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.594 kb on + strand, within A4249_RS08360 at 1677.595 kb on - strand, within A4249_RS08360 at 1677.595 kb on - strand, within A4249_RS08360 at 1677.610 kb on - strand, within A4249_RS08360 at 1677.610 kb on - strand, within A4249_RS08360 at 1677.610 kb on - strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.693 kb on + strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360 at 1677.694 kb on - strand, within A4249_RS08360
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 1,674,545 + -0.2 1,674,546 - -0.4 1,674,546 - +0.2 1,674,647 - A4249_RS08340 0.12 -1.9 1,674,723 + A4249_RS08340 0.25 +0.5 1,674,723 + A4249_RS08340 0.25 +0.3 1,674,724 - A4249_RS08340 0.26 -0.3 1,674,796 + A4249_RS08340 0.38 +0.5 1,674,797 - A4249_RS08340 0.38 -0.1 1,674,797 - A4249_RS08340 0.38 +0.9 1,674,917 + A4249_RS08340 0.60 +0.7 1,674,917 + A4249_RS08340 0.60 -0.3 1,674,917 + A4249_RS08340 0.60 -0.5 1,674,917 + A4249_RS08340 0.60 +1.0 1,674,917 + A4249_RS08340 0.60 +1.0 1,674,917 + A4249_RS08340 0.60 +0.7 1,674,917 + A4249_RS08340 0.60 -0.9 1,674,918 - A4249_RS08340 0.60 -0.7 1,674,918 - A4249_RS08340 0.60 -0.2 1,674,918 - A4249_RS08340 0.60 +0.1 1,674,918 - A4249_RS08340 0.60 -0.3 1,675,156 + -1.6 1,675,156 + -0.3 1,675,156 + -0.2 1,675,156 + -0.1 1,675,156 + +0.6 1,675,156 + -0.2 1,675,157 - +1.6 1,675,158 + -0.9 1,675,158 + +1.7 1,675,158 + +0.2 1,675,158 + -0.5 1,675,158 + +0.7 1,675,158 + +1.4 1,675,158 + -0.8 1,675,158 + +1.5 1,675,158 + -0.9 1,675,158 + -1.5 1,675,158 + -1.0 1,675,158 + +0.3 1,675,158 + +0.3 1,675,159 - -0.3 1,675,159 - +0.6 1,675,159 - -0.1 1,675,159 - +0.9 1,675,159 - +1.9 1,675,159 - -0.4 1,675,159 - -0.8 1,675,159 - +0.9 1,675,437 + +0.4 1,675,437 + -0.1 1,675,438 - -0.4 1,675,438 - -0.6 1,675,438 - -0.4 1,675,564 + +0.9 1,675,564 + +0.6 1,675,564 + +0.0 1,675,564 + -0.5 1,675,565 - +0.1 1,675,565 - -2.4 1,675,565 - +1.4 1,675,605 - -0.6 1,675,605 - +1.5 1,675,975 + A4249_RS08350 0.34 +1.3 1,675,975 + A4249_RS08350 0.34 +0.1 1,675,975 + A4249_RS08350 0.34 -0.9 1,675,975 + A4249_RS08350 0.34 +0.2 1,675,975 + A4249_RS08350 0.34 -0.6 1,675,975 + A4249_RS08350 0.34 +1.1 1,675,976 - A4249_RS08350 0.34 +0.6 1,675,976 - A4249_RS08350 0.34 -0.1 1,675,976 - A4249_RS08350 0.34 +0.1 1,676,059 + A4249_RS08350 0.40 +0.0 1,676,060 - A4249_RS08350 0.40 +0.1 1,676,060 - A4249_RS08350 0.40 +0.1 1,676,648 + A4249_RS08350 0.83 -0.5 1,676,649 - A4249_RS08350 0.83 +0.1 1,676,649 - A4249_RS08350 0.83 +0.4 1,676,797 + +0.6 1,676,797 + -0.5 1,676,797 + +0.2 1,676,797 + +0.4 1,676,798 - -0.3 1,676,798 - -0.1 1,676,798 - -0.2 1,676,798 - -0.5 1,676,798 - +0.5 1,676,800 + +0.6 1,676,800 + +1.3 1,676,800 + +0.2 1,676,801 - +0.3 1,676,801 - +0.5 1,676,864 + -0.0 1,676,932 + A4249_RS08355 0.16 -0.5 1,676,932 + A4249_RS08355 0.16 -0.3 1,676,932 + A4249_RS08355 0.16 -0.6 1,676,932 + A4249_RS08355 0.16 -0.5 1,676,932 + A4249_RS08355 0.16 -0.1 1,676,932 + A4249_RS08355 0.16 -0.4 1,676,932 + A4249_RS08355 0.16 -0.9 1,676,932 + A4249_RS08355 0.16 +0.1 1,676,932 + A4249_RS08355 0.16 -0.5 1,676,932 + A4249_RS08355 0.16 -0.2 1,676,932 + A4249_RS08355 0.16 -0.9 1,676,932 + A4249_RS08355 0.16 -0.3 1,676,933 - A4249_RS08355 0.16 -0.9 1,676,933 - A4249_RS08355 0.16 -0.8 1,676,933 - A4249_RS08355 0.16 +0.1 1,676,933 - A4249_RS08355 0.16 -1.3 1,676,933 - A4249_RS08355 0.16 -0.7 1,676,933 - A4249_RS08355 0.16 -1.5 1,676,934 + A4249_RS08355 0.17 +1.2 1,676,934 + A4249_RS08355 0.17 -0.8 1,676,934 + A4249_RS08355 0.17 +0.0 1,676,934 + A4249_RS08355 0.17 -0.5 1,676,934 + A4249_RS08355 0.17 -0.4 1,676,934 + A4249_RS08355 0.17 -1.0 1,676,935 - A4249_RS08355 0.17 +0.4 1,676,935 - A4249_RS08355 0.17 +0.8 1,676,935 - A4249_RS08355 0.17 -0.3 1,676,935 - A4249_RS08355 0.17 -1.2 1,676,935 - A4249_RS08355 0.17 -1.6 1,676,935 - A4249_RS08355 0.17 -0.8 1,676,935 - A4249_RS08355 0.17 -0.3 1,676,935 - A4249_RS08355 0.17 -0.1 1,676,935 - A4249_RS08355 0.17 +1.1 1,676,958 - A4249_RS08355 0.23 +1.3 1,677,159 + A4249_RS08355 0.78 +0.9 1,677,160 - A4249_RS08355 0.78 -0.9 1,677,307 + -0.6 1,677,307 + +0.5 1,677,307 + +0.3 1,677,308 - -0.0 1,677,308 - +0.4 1,677,308 - -0.3 1,677,308 - -0.2 1,677,308 - -0.5 1,677,308 - +0.0 1,677,330 - -0.3 1,677,340 + -0.6 1,677,340 + +0.8 1,677,341 - -0.6 1,677,341 - -0.7 1,677,448 + -0.1 1,677,449 - +0.0 1,677,501 + A4249_RS08360 0.12 -0.3 1,677,501 + A4249_RS08360 0.12 +0.7 1,677,501 + A4249_RS08360 0.12 -0.7 1,677,501 + A4249_RS08360 0.12 +0.2 1,677,502 - A4249_RS08360 0.12 +0.3 1,677,502 - A4249_RS08360 0.12 -0.3 1,677,502 - A4249_RS08360 0.12 -0.3 1,677,502 - A4249_RS08360 0.12 +0.4 1,677,502 - A4249_RS08360 0.12 -0.5 1,677,502 - A4249_RS08360 0.12 -1.0 1,677,502 - A4249_RS08360 0.12 -1.3 1,677,502 - A4249_RS08360 0.12 -0.1 1,677,594 + A4249_RS08360 0.20 -0.0 1,677,594 + A4249_RS08360 0.20 +0.7 1,677,594 + A4249_RS08360 0.20 +0.3 1,677,594 + A4249_RS08360 0.20 -0.6 1,677,594 + A4249_RS08360 0.20 -0.1 1,677,594 + A4249_RS08360 0.20 -0.6 1,677,594 + A4249_RS08360 0.20 +0.1 1,677,594 + A4249_RS08360 0.20 +0.8 1,677,594 + A4249_RS08360 0.20 -0.0 1,677,594 + A4249_RS08360 0.20 -1.1 1,677,594 + A4249_RS08360 0.20 -0.5 1,677,595 - A4249_RS08360 0.20 -0.9 1,677,595 - A4249_RS08360 0.20 +0.2 1,677,610 - A4249_RS08360 0.21 -0.3 1,677,610 - A4249_RS08360 0.21 +0.1 1,677,610 - A4249_RS08360 0.21 +0.8 1,677,693 + A4249_RS08360 0.27 -0.6 1,677,693 + A4249_RS08360 0.27 +0.3 1,677,693 + A4249_RS08360 0.27 -0.0 1,677,693 + A4249_RS08360 0.27 +0.6 1,677,693 + A4249_RS08360 0.27 -0.3 1,677,693 + A4249_RS08360 0.27 +2.5 1,677,693 + A4249_RS08360 0.27 -0.0 1,677,693 + A4249_RS08360 0.27 +0.2 1,677,693 + A4249_RS08360 0.27 +0.4 1,677,694 - A4249_RS08360 0.28 -0.5 1,677,694 - A4249_RS08360 0.28 -0.6 1,677,694 - A4249_RS08360 0.28 +0.9 1,677,694 - A4249_RS08360 0.28 -0.3 1,677,694 - A4249_RS08360 0.28 -0.9 1,677,694 - A4249_RS08360 0.28 -0.5 1,677,694 - A4249_RS08360 0.28 -1.2 1,677,694 - A4249_RS08360 0.28 -0.8 1,677,694 - A4249_RS08360 0.28 +0.1 1,677,694 - A4249_RS08360 0.28 -1.1 1,677,694 - A4249_RS08360 0.28 +1.1 1,677,694 - A4249_RS08360 0.28 -0.4 1,677,694 - A4249_RS08360 0.28 +0.1 1,677,694 - A4249_RS08360 0.28 -0.7
Or see this region's nucleotide sequence