Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06475 and A4249_RS06480 are separated by 194 nucleotides A4249_RS06480 and A4249_RS06485 are separated by 3 nucleotides A4249_RS06485 and A4249_RS06490 are separated by 73 nucleotides
A4249_RS06475: A4249_RS06475 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,318,706 to 1,319,974
_RS06475
A4249_RS06480: A4249_RS06480 - HAD-IB family hydrolase, at 1,320,169 to 1,320,816
_RS06480
A4249_RS06485: A4249_RS06485 - hypothetical protein, at 1,320,820 to 1,321,140
_RS06485
A4249_RS06490: A4249_RS06490 - ATP-dependent Clp protease proteolytic subunit, at 1,321,214 to 1,321,861
_RS06490
Position (kb)
1320
1321 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1319.975 kb on - strand at 1320.183 kb on + strand at 1320.183 kb on + strand at 1320.183 kb on + strand at 1320.197 kb on + strand at 1320.198 kb on - strand at 1320.707 kb on - strand, within A4249_RS06480 at 1320.821 kb on + strand at 1320.821 kb on + strand at 1320.821 kb on + strand at 1320.822 kb on - strand at 1320.822 kb on - strand at 1320.822 kb on - strand at 1320.822 kb on - strand at 1321.088 kb on + strand, within A4249_RS06485 at 1321.088 kb on + strand, within A4249_RS06485 at 1321.088 kb on + strand, within A4249_RS06485 at 1321.089 kb on - strand, within A4249_RS06485 at 1321.089 kb on - strand, within A4249_RS06485 at 1321.089 kb on - strand, within A4249_RS06485 at 1321.215 kb on + strand at 1321.215 kb on + strand at 1321.216 kb on - strand at 1321.216 kb on - strand at 1321.216 kb on - strand at 1321.216 kb on - strand at 1321.233 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 1,319,975 - -0.6 1,320,183 + -0.4 1,320,183 + +0.0 1,320,183 + -2.4 1,320,197 + -0.3 1,320,198 - +0.1 1,320,707 - A4249_RS06480 0.83 +0.4 1,320,821 + -0.1 1,320,821 + +0.5 1,320,821 + -0.2 1,320,822 - +0.2 1,320,822 - -1.5 1,320,822 - +0.2 1,320,822 - -0.2 1,321,088 + A4249_RS06485 0.83 -0.4 1,321,088 + A4249_RS06485 0.83 -1.4 1,321,088 + A4249_RS06485 0.83 -0.0 1,321,089 - A4249_RS06485 0.84 -0.3 1,321,089 - A4249_RS06485 0.84 -0.1 1,321,089 - A4249_RS06485 0.84 -0.1 1,321,215 + -0.5 1,321,215 + +2.2 1,321,216 - -1.3 1,321,216 - +0.2 1,321,216 - -0.0 1,321,216 - -0.7 1,321,233 - -0.2
Or see this region's nucleotide sequence