Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06085

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06075 and A4249_RS06080 are separated by 114 nucleotidesA4249_RS06080 and A4249_RS06085 are separated by 75 nucleotidesA4249_RS06085 and A4249_RS06090 are separated by 53 nucleotidesA4249_RS06090 and A4249_RS06095 are separated by 18 nucleotides A4249_RS06075: A4249_RS06075 - flagellar motor protein MotB, at 1,235,012 to 1,235,902 _RS06075 A4249_RS06080: A4249_RS06080 - arginyltransferase, at 1,236,017 to 1,236,754 _RS06080 A4249_RS06085: A4249_RS06085 - peroxide stress protein YaaA, at 1,236,830 to 1,237,600 _RS06085 A4249_RS06090: A4249_RS06090 - 3-hydroxybutyrate dehydrogenase, at 1,237,654 to 1,238,496 _RS06090 A4249_RS06095: A4249_RS06095 - patatin-like phospholipase family protein, at 1,238,515 to 1,239,582 _RS06095 Position (kb) 1236 1237 1238Strain fitness (log2 ratio) -2 -1 0 1 2at 1235.986 kb on + strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1236.030 kb on + strandat 1236.030 kb on + strandat 1236.030 kb on + strandat 1236.030 kb on + strandat 1236.031 kb on - strandat 1236.031 kb on - strandat 1236.031 kb on - strandat 1236.080 kb on + strandat 1236.081 kb on - strandat 1236.318 kb on + strand, within A4249_RS06080at 1236.318 kb on + strand, within A4249_RS06080at 1236.318 kb on + strand, within A4249_RS06080at 1236.318 kb on + strand, within A4249_RS06080at 1236.319 kb on - strand, within A4249_RS06080at 1236.319 kb on - strand, within A4249_RS06080at 1236.319 kb on - strand, within A4249_RS06080at 1236.363 kb on - strand, within A4249_RS06080at 1236.416 kb on + strand, within A4249_RS06080at 1236.416 kb on + strand, within A4249_RS06080at 1236.416 kb on + strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.464 kb on + strand, within A4249_RS06080at 1236.464 kb on + strand, within A4249_RS06080at 1236.511 kb on - strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.615 kb on + strand, within A4249_RS06080at 1236.615 kb on + strand, within A4249_RS06080at 1236.615 kb on + strand, within A4249_RS06080at 1236.616 kb on - strand, within A4249_RS06080at 1236.616 kb on - strand, within A4249_RS06080at 1236.616 kb on - strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.651 kb on - strand, within A4249_RS06080at 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.886 kb on + strandat 1236.887 kb on - strandat 1236.887 kb on - strandat 1236.919 kb on + strand, within A4249_RS06085at 1236.920 kb on - strand, within A4249_RS06085at 1236.920 kb on - strand, within A4249_RS06085at 1236.920 kb on - strand, within A4249_RS06085at 1236.920 kb on - strand, within A4249_RS06085at 1236.920 kb on - strand, within A4249_RS06085at 1236.920 kb on - strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.085 kb on + strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.086 kb on - strand, within A4249_RS06085at 1237.167 kb on - strand, within A4249_RS06085at 1237.253 kb on + strand, within A4249_RS06085at 1237.253 kb on + strand, within A4249_RS06085at 1237.254 kb on - strand, within A4249_RS06085at 1237.254 kb on - strand, within A4249_RS06085at 1237.254 kb on - strand, within A4249_RS06085at 1237.254 kb on - strand, within A4249_RS06085at 1237.346 kb on + strand, within A4249_RS06085at 1237.346 kb on + strand, within A4249_RS06085at 1237.347 kb on - strand, within A4249_RS06085at 1237.347 kb on - strand, within A4249_RS06085at 1237.535 kb on + strandat 1237.575 kb on + strandat 1237.668 kb on + strandat 1237.668 kb on + strandat 1237.668 kb on + strandat 1237.669 kb on - strandat 1237.669 kb on - strandat 1237.888 kb on + strand, within A4249_RS06090at 1237.888 kb on + strand, within A4249_RS06090at 1237.888 kb on + strand, within A4249_RS06090at 1237.888 kb on + strand, within A4249_RS06090at 1237.889 kb on - strand, within A4249_RS06090at 1237.889 kb on - strand, within A4249_RS06090at 1237.889 kb on - strand, within A4249_RS06090at 1237.889 kb on - strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.973 kb on + strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1237.974 kb on - strand, within A4249_RS06090at 1238.071 kb on + strand, within A4249_RS06090at 1238.071 kb on + strand, within A4249_RS06090at 1238.072 kb on - strand, within A4249_RS06090at 1238.072 kb on - strand, within A4249_RS06090at 1238.072 kb on - strand, within A4249_RS06090at 1238.176 kb on + strand, within A4249_RS06090at 1238.176 kb on + strand, within A4249_RS06090at 1238.177 kb on - strand, within A4249_RS06090at 1238.177 kb on - strand, within A4249_RS06090at 1238.177 kb on - strand, within A4249_RS06090at 1238.422 kb on + strandat 1238.422 kb on + strandat 1238.423 kb on - strandat 1238.494 kb on + strandat 1238.494 kb on + strandat 1238.494 kb on + strandat 1238.495 kb on - strandat 1238.585 kb on + strandat 1238.585 kb on + strandat 1238.585 kb on + strandat 1238.585 kb on + strandat 1238.585 kb on + strandat 1238.585 kb on + strandat 1238.586 kb on - strandat 1238.586 kb on - strandat 1238.586 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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1,235,986 + +0.1
1,235,987 - +0.1
1,235,987 - +0.4
1,235,987 - -0.2
1,235,987 - -0.2
1,235,987 - -0.0
1,235,987 - +0.5
1,235,987 - +0.8
1,236,030 + -0.5
1,236,030 + +0.2
1,236,030 + +1.0
1,236,030 + +0.7
1,236,031 - -0.1
1,236,031 - +0.1
1,236,031 - -0.5
1,236,080 + -0.9
1,236,081 - +0.1
1,236,318 + A4249_RS06080 0.41 -1.8
1,236,318 + A4249_RS06080 0.41 +0.1
1,236,318 + A4249_RS06080 0.41 -0.3
1,236,318 + A4249_RS06080 0.41 -2.1
1,236,319 - A4249_RS06080 0.41 -1.4
1,236,319 - A4249_RS06080 0.41 -0.2
1,236,319 - A4249_RS06080 0.41 -0.2
1,236,363 - A4249_RS06080 0.47 -0.2
1,236,416 + A4249_RS06080 0.54 +0.2
1,236,416 + A4249_RS06080 0.54 -0.1
1,236,416 + A4249_RS06080 0.54 -0.0
1,236,417 - A4249_RS06080 0.54 +0.4
1,236,417 - A4249_RS06080 0.54 +0.4
1,236,417 - A4249_RS06080 0.54 -0.2
1,236,417 - A4249_RS06080 0.54 +0.1
1,236,417 - A4249_RS06080 0.54 +0.1
1,236,464 + A4249_RS06080 0.61 -0.2
1,236,464 + A4249_RS06080 0.61 -0.1
1,236,511 - A4249_RS06080 0.67 -0.2
1,236,551 + A4249_RS06080 0.72 -0.1
1,236,551 + A4249_RS06080 0.72 -0.7
1,236,551 + A4249_RS06080 0.72 +0.1
1,236,551 + A4249_RS06080 0.72 -0.1
1,236,551 + A4249_RS06080 0.72 -0.4
1,236,551 + A4249_RS06080 0.72 -0.2
1,236,551 + A4249_RS06080 0.72 -0.0
1,236,551 + A4249_RS06080 0.72 -1.5
1,236,551 + A4249_RS06080 0.72 +0.4
1,236,552 - A4249_RS06080 0.72 -0.0
1,236,552 - A4249_RS06080 0.72 +0.4
1,236,552 - A4249_RS06080 0.72 +0.3
1,236,552 - A4249_RS06080 0.72 +0.4
1,236,552 - A4249_RS06080 0.72 -0.7
1,236,552 - A4249_RS06080 0.72 +0.4
1,236,560 + A4249_RS06080 0.74 +0.6
1,236,560 + A4249_RS06080 0.74 -0.9
1,236,560 + A4249_RS06080 0.74 -1.7
1,236,560 + A4249_RS06080 0.74 +0.0
1,236,560 + A4249_RS06080 0.74 +0.1
1,236,561 - A4249_RS06080 0.74 -0.9
1,236,561 - A4249_RS06080 0.74 +0.6
1,236,561 - A4249_RS06080 0.74 -0.5
1,236,561 - A4249_RS06080 0.74 -0.0
1,236,561 - A4249_RS06080 0.74 +0.0
1,236,561 - A4249_RS06080 0.74 -0.5
1,236,561 - A4249_RS06080 0.74 +1.0
1,236,561 - A4249_RS06080 0.74 -0.4
1,236,615 + A4249_RS06080 0.81 +0.1
1,236,615 + A4249_RS06080 0.81 -0.3
1,236,615 + A4249_RS06080 0.81 +0.4
1,236,616 - A4249_RS06080 0.81 -0.9
1,236,616 - A4249_RS06080 0.81 +1.6
1,236,616 - A4249_RS06080 0.81 -1.2
1,236,650 + A4249_RS06080 0.86 -2.6
1,236,650 + A4249_RS06080 0.86 +1.3
1,236,650 + A4249_RS06080 0.86 +0.1
1,236,650 + A4249_RS06080 0.86 +0.3
1,236,650 + A4249_RS06080 0.86 +0.7
1,236,651 - A4249_RS06080 0.86 -0.4
1,236,689 + -0.0
1,236,689 + -1.8
1,236,689 + +0.2
1,236,689 + -0.3
1,236,689 + +0.8
1,236,689 + +0.5
1,236,689 + -0.5
1,236,689 + -0.7
1,236,690 - -0.8
1,236,690 - -0.3
1,236,690 - -0.0
1,236,690 - -0.6
1,236,690 - +0.1
1,236,690 - -1.4
1,236,690 - +0.3
1,236,690 - +0.0
1,236,690 - -0.2
1,236,690 - +0.3
1,236,690 - +0.8
1,236,799 + -0.9
1,236,799 + -0.1
1,236,799 + +0.8
1,236,799 + -0.4
1,236,799 + +0.7
1,236,799 + -0.9
1,236,799 + +0.3
1,236,799 + -0.7
1,236,799 + -1.1
1,236,799 + -0.8
1,236,799 + +0.6
1,236,799 + +0.3
1,236,799 + -1.0
1,236,799 + -0.6
1,236,799 + +0.9
1,236,799 + +0.1
1,236,799 + +1.0
1,236,799 + -0.9
1,236,800 - +0.3
1,236,800 - +1.1
1,236,800 - -0.9
1,236,800 - +1.8
1,236,800 - -0.3
1,236,800 - +0.6
1,236,800 - +0.2
1,236,800 - -0.6
1,236,800 - +0.2
1,236,800 - -0.0
1,236,800 - +1.4
1,236,800 - +0.0
1,236,800 - +0.1
1,236,800 - -0.2
1,236,800 - -0.1
1,236,800 - -1.6
1,236,800 - -0.3
1,236,886 + -0.9
1,236,887 - +0.3
1,236,887 - -0.8
1,236,919 + A4249_RS06085 0.12 +0.6
1,236,920 - A4249_RS06085 0.12 -0.7
1,236,920 - A4249_RS06085 0.12 -0.5
1,236,920 - A4249_RS06085 0.12 -0.5
1,236,920 - A4249_RS06085 0.12 +1.1
1,236,920 - A4249_RS06085 0.12 +0.5
1,236,920 - A4249_RS06085 0.12 -1.8
1,237,085 + A4249_RS06085 0.33 +0.1
1,237,085 + A4249_RS06085 0.33 -1.5
1,237,085 + A4249_RS06085 0.33 -0.6
1,237,085 + A4249_RS06085 0.33 -0.7
1,237,085 + A4249_RS06085 0.33 -0.7
1,237,085 + A4249_RS06085 0.33 +0.5
1,237,085 + A4249_RS06085 0.33 -1.2
1,237,085 + A4249_RS06085 0.33 -0.4
1,237,085 + A4249_RS06085 0.33 -0.4
1,237,085 + A4249_RS06085 0.33 -0.9
1,237,085 + A4249_RS06085 0.33 +0.7
1,237,086 - A4249_RS06085 0.33 +0.2
1,237,086 - A4249_RS06085 0.33 +1.1
1,237,086 - A4249_RS06085 0.33 -0.1
1,237,086 - A4249_RS06085 0.33 -0.4
1,237,086 - A4249_RS06085 0.33 +0.9
1,237,086 - A4249_RS06085 0.33 -0.2
1,237,086 - A4249_RS06085 0.33 -0.8
1,237,086 - A4249_RS06085 0.33 -0.2
1,237,167 - A4249_RS06085 0.44 +0.7
1,237,253 + A4249_RS06085 0.55 -1.3
1,237,253 + A4249_RS06085 0.55 +0.2
1,237,254 - A4249_RS06085 0.55 -0.9
1,237,254 - A4249_RS06085 0.55 +0.3
1,237,254 - A4249_RS06085 0.55 +0.1
1,237,254 - A4249_RS06085 0.55 -0.2
1,237,346 + A4249_RS06085 0.67 -1.1
1,237,346 + A4249_RS06085 0.67 -1.0
1,237,347 - A4249_RS06085 0.67 -0.6
1,237,347 - A4249_RS06085 0.67 +0.1
1,237,535 + -0.3
1,237,575 + +1.1
1,237,668 + -0.0
1,237,668 + -1.1
1,237,668 + +1.1
1,237,669 - +0.6
1,237,669 - +0.1
1,237,888 + A4249_RS06090 0.28 +0.3
1,237,888 + A4249_RS06090 0.28 -0.6
1,237,888 + A4249_RS06090 0.28 -1.1
1,237,888 + A4249_RS06090 0.28 +1.2
1,237,889 - A4249_RS06090 0.28 +0.0
1,237,889 - A4249_RS06090 0.28 -0.9
1,237,889 - A4249_RS06090 0.28 -0.1
1,237,889 - A4249_RS06090 0.28 -0.8
1,237,973 + A4249_RS06090 0.38 -0.7
1,237,973 + A4249_RS06090 0.38 +1.1
1,237,973 + A4249_RS06090 0.38 +1.0
1,237,973 + A4249_RS06090 0.38 +0.3
1,237,973 + A4249_RS06090 0.38 +0.1
1,237,973 + A4249_RS06090 0.38 +0.5
1,237,973 + A4249_RS06090 0.38 +0.2
1,237,974 - A4249_RS06090 0.38 -0.9
1,237,974 - A4249_RS06090 0.38 -0.7
1,237,974 - A4249_RS06090 0.38 -0.2
1,237,974 - A4249_RS06090 0.38 -0.7
1,237,974 - A4249_RS06090 0.38 -0.2
1,237,974 - A4249_RS06090 0.38 -0.1
1,237,974 - A4249_RS06090 0.38 -0.3
1,237,974 - A4249_RS06090 0.38 +0.6
1,237,974 - A4249_RS06090 0.38 -0.0
1,238,071 + A4249_RS06090 0.49 +0.3
1,238,071 + A4249_RS06090 0.49 -1.0
1,238,072 - A4249_RS06090 0.50 -0.3
1,238,072 - A4249_RS06090 0.50 -0.1
1,238,072 - A4249_RS06090 0.50 +0.6
1,238,176 + A4249_RS06090 0.62 +0.3
1,238,176 + A4249_RS06090 0.62 +0.2
1,238,177 - A4249_RS06090 0.62 +0.9
1,238,177 - A4249_RS06090 0.62 +0.5
1,238,177 - A4249_RS06090 0.62 -0.0
1,238,422 + +0.9
1,238,422 + -0.2
1,238,423 - -1.1
1,238,494 + -0.9
1,238,494 + -0.0
1,238,494 + -0.4
1,238,495 - +0.5
1,238,585 + +0.7
1,238,585 + -0.4
1,238,585 + -0.0
1,238,585 + -0.7
1,238,585 + -0.0
1,238,585 + +0.1
1,238,586 - +0.1
1,238,586 - +0.5
1,238,586 - +0.4

Or see this region's nucleotide sequence