Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05030 and A4249_RS05035 are separated by 146 nucleotides A4249_RS05035 and A4249_RS05040 are separated by 76 nucleotides
A4249_RS05030: A4249_RS05030 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 1,040,670 to 1,041,470
_RS05030
A4249_RS05035: A4249_RS05035 - Mrp/NBP35 family ATP-binding protein, at 1,041,617 to 1,042,684
_RS05035
A4249_RS05040: A4249_RS05040 - NADH:flavin oxidoreductase, at 1,042,761 to 1,043,858
_RS05040
Position (kb)
1041
1042
1043 Strain fitness (log2 ratio)
-2
-1
0
1 at 1041.574 kb on + strand at 1041.575 kb on - strand at 1041.575 kb on - strand at 1041.575 kb on - strand at 1041.847 kb on - strand, within A4249_RS05035 at 1041.847 kb on - strand, within A4249_RS05035 at 1041.847 kb on - strand, within A4249_RS05035 at 1041.859 kb on + strand, within A4249_RS05035 at 1041.859 kb on + strand, within A4249_RS05035 at 1042.683 kb on - strand at 1042.739 kb on + strand at 1042.739 kb on + strand at 1042.740 kb on - strand at 1042.745 kb on + strand at 1042.745 kb on + strand at 1042.746 kb on - strand at 1042.746 kb on - strand at 1042.887 kb on + strand, within A4249_RS05040 at 1042.887 kb on + strand, within A4249_RS05040 at 1042.888 kb on - strand, within A4249_RS05040 at 1042.888 kb on - strand, within A4249_RS05040 at 1042.891 kb on - strand, within A4249_RS05040 at 1043.052 kb on - strand, within A4249_RS05040 at 1043.052 kb on - strand, within A4249_RS05040 at 1043.277 kb on + strand, within A4249_RS05040 at 1043.277 kb on + strand, within A4249_RS05040 at 1043.277 kb on + strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.278 kb on - strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.308 kb on + strand, within A4249_RS05040 at 1043.451 kb on + strand, within A4249_RS05040 at 1043.451 kb on + strand, within A4249_RS05040 at 1043.451 kb on + strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040 at 1043.452 kb on - strand, within A4249_RS05040
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 1,041,574 + +0.8 1,041,575 - -0.3 1,041,575 - -0.3 1,041,575 - +0.2 1,041,847 - A4249_RS05035 0.22 -0.8 1,041,847 - A4249_RS05035 0.22 -0.2 1,041,847 - A4249_RS05035 0.22 -0.7 1,041,859 + A4249_RS05035 0.23 -1.9 1,041,859 + A4249_RS05035 0.23 +1.4 1,042,683 - +0.1 1,042,739 + -0.6 1,042,739 + +0.3 1,042,740 - -0.8 1,042,745 + -0.2 1,042,745 + +0.0 1,042,746 - -0.3 1,042,746 - -0.8 1,042,887 + A4249_RS05040 0.11 +0.1 1,042,887 + A4249_RS05040 0.11 -0.2 1,042,888 - A4249_RS05040 0.12 -0.0 1,042,888 - A4249_RS05040 0.12 +1.0 1,042,891 - A4249_RS05040 0.12 -1.1 1,043,052 - A4249_RS05040 0.27 +0.2 1,043,052 - A4249_RS05040 0.27 +0.6 1,043,277 + A4249_RS05040 0.47 -0.3 1,043,277 + A4249_RS05040 0.47 +0.6 1,043,277 + A4249_RS05040 0.47 +0.3 1,043,278 - A4249_RS05040 0.47 +0.1 1,043,278 - A4249_RS05040 0.47 -0.8 1,043,278 - A4249_RS05040 0.47 -0.1 1,043,278 - A4249_RS05040 0.47 -1.6 1,043,308 + A4249_RS05040 0.50 +0.1 1,043,308 + A4249_RS05040 0.50 -0.4 1,043,308 + A4249_RS05040 0.50 +0.3 1,043,308 + A4249_RS05040 0.50 +0.2 1,043,451 + A4249_RS05040 0.63 -0.2 1,043,451 + A4249_RS05040 0.63 -0.1 1,043,451 + A4249_RS05040 0.63 -0.0 1,043,452 - A4249_RS05040 0.63 -0.2 1,043,452 - A4249_RS05040 0.63 +0.1 1,043,452 - A4249_RS05040 0.63 +0.1 1,043,452 - A4249_RS05040 0.63 +0.6
Or see this region's nucleotide sequence