Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04445 and A4249_RS04450 are separated by 13 nucleotides A4249_RS04450 and A4249_RS04455 are separated by 2 nucleotides A4249_RS04455 and A4249_RS04460 are separated by 8 nucleotides
A4249_RS04445: A4249_RS04445 - ubiquinol oxidase subunit II, at 924,384 to 925,613
_RS04445
A4249_RS04450: A4249_RS04450 - cytochrome o ubiquinol oxidase subunit I, at 925,627 to 927,630
_RS04450
A4249_RS04455: A4249_RS04455 - cytochrome o ubiquinol oxidase subunit III, at 927,633 to 928,256
_RS04455
A4249_RS04460: A4249_RS04460 - cytochrome o ubiquinol oxidase subunit IV, at 928,265 to 928,648
_RS04460
Position (kb) 925
926
927
928 Strain fitness (log2 ratio) -2
-1
0
1
2 at 924.921 kb on + strand, within A4249_RS04445 at 924.921 kb on + strand, within A4249_RS04445 at 924.948 kb on + strand, within A4249_RS04445 at 925.026 kb on + strand, within A4249_RS04445 at 925.332 kb on + strand, within A4249_RS04445 at 925.332 kb on + strand, within A4249_RS04445 at 925.341 kb on + strand, within A4249_RS04445 at 925.341 kb on + strand, within A4249_RS04445 at 925.341 kb on + strand, within A4249_RS04445 at 925.341 kb on + strand, within A4249_RS04445 at 925.341 kb on + strand, within A4249_RS04445 at 925.341 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.389 kb on + strand, within A4249_RS04445 at 925.459 kb on + strand, within A4249_RS04445 at 925.459 kb on + strand, within A4249_RS04445 at 925.459 kb on + strand, within A4249_RS04445 at 925.459 kb on + strand, within A4249_RS04445 at 925.463 kb on + strand, within A4249_RS04445 at 925.463 kb on + strand, within A4249_RS04445 at 925.834 kb on + strand, within A4249_RS04450 at 926.026 kb on + strand, within A4249_RS04450 at 926.026 kb on + strand, within A4249_RS04450 at 926.170 kb on + strand, within A4249_RS04450 at 926.225 kb on + strand, within A4249_RS04450 at 926.225 kb on + strand, within A4249_RS04450 at 926.363 kb on + strand, within A4249_RS04450 at 926.476 kb on + strand, within A4249_RS04450 at 926.605 kb on + strand, within A4249_RS04450 at 927.301 kb on + strand, within A4249_RS04450 at 927.322 kb on + strand, within A4249_RS04450 at 927.322 kb on + strand, within A4249_RS04450 at 927.322 kb on + strand, within A4249_RS04450 at 927.475 kb on + strand at 927.534 kb on + strand at 927.534 kb on + strand at 927.534 kb on + strand at 927.534 kb on + strand at 927.534 kb on + strand at 927.534 kb on + strand at 927.544 kb on + strand at 927.544 kb on + strand at 927.556 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.559 kb on + strand at 927.732 kb on + strand, within A4249_RS04455 at 927.798 kb on + strand, within A4249_RS04455 at 927.885 kb on + strand, within A4249_RS04455 at 927.885 kb on + strand, within A4249_RS04455 at 928.233 kb on + strand at 928.233 kb on + strand at 928.233 kb on + strand at 928.343 kb on + strand, within A4249_RS04460 at 928.343 kb on + strand, within A4249_RS04460 at 928.343 kb on + strand, within A4249_RS04460 at 928.343 kb on + strand, within A4249_RS04460 at 928.481 kb on + strand, within A4249_RS04460 at 928.481 kb on + strand, within A4249_RS04460 at 928.481 kb on + strand, within A4249_RS04460 at 928.589 kb on + strand, within A4249_RS04460 at 928.589 kb on + strand, within A4249_RS04460 at 928.589 kb on + strand, within A4249_RS04460
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 924,921 + A4249_RS04445 0.44 -1.7 924,921 + A4249_RS04445 0.44 +0.8 924,948 + A4249_RS04445 0.46 +1.9 925,026 + A4249_RS04445 0.52 -1.7 925,332 + A4249_RS04445 0.77 -0.4 925,332 + A4249_RS04445 0.77 -0.1 925,341 + A4249_RS04445 0.78 -1.1 925,341 + A4249_RS04445 0.78 +0.2 925,341 + A4249_RS04445 0.78 -0.1 925,341 + A4249_RS04445 0.78 +0.1 925,341 + A4249_RS04445 0.78 +1.2 925,341 + A4249_RS04445 0.78 +1.0 925,389 + A4249_RS04445 0.82 -1.2 925,389 + A4249_RS04445 0.82 -0.4 925,389 + A4249_RS04445 0.82 +0.2 925,389 + A4249_RS04445 0.82 -0.4 925,389 + A4249_RS04445 0.82 -0.1 925,389 + A4249_RS04445 0.82 +0.6 925,389 + A4249_RS04445 0.82 +0.2 925,389 + A4249_RS04445 0.82 -0.1 925,389 + A4249_RS04445 0.82 +0.0 925,459 + A4249_RS04445 0.87 +0.3 925,459 + A4249_RS04445 0.87 -0.2 925,459 + A4249_RS04445 0.87 -0.0 925,459 + A4249_RS04445 0.87 -0.1 925,463 + A4249_RS04445 0.88 +0.5 925,463 + A4249_RS04445 0.88 -0.6 925,834 + A4249_RS04450 0.10 +0.8 926,026 + A4249_RS04450 0.20 +0.6 926,026 + A4249_RS04450 0.20 -0.2 926,170 + A4249_RS04450 0.27 +1.2 926,225 + A4249_RS04450 0.30 -0.8 926,225 + A4249_RS04450 0.30 +0.2 926,363 + A4249_RS04450 0.37 +0.2 926,476 + A4249_RS04450 0.42 -0.2 926,605 + A4249_RS04450 0.49 +1.4 927,301 + A4249_RS04450 0.84 -0.3 927,322 + A4249_RS04450 0.85 +0.8 927,322 + A4249_RS04450 0.85 -0.4 927,322 + A4249_RS04450 0.85 -0.9 927,475 + -1.5 927,534 + +1.1 927,534 + +0.2 927,534 + -0.1 927,534 + -0.2 927,534 + -2.0 927,534 + -0.7 927,544 + +0.8 927,544 + +0.3 927,556 + -0.2 927,559 + -0.5 927,559 + -0.4 927,559 + -0.8 927,559 + +0.0 927,559 + +0.1 927,559 + +0.6 927,559 + +0.2 927,559 + -0.6 927,559 + +0.2 927,732 + A4249_RS04455 0.16 +0.2 927,798 + A4249_RS04455 0.26 -0.8 927,885 + A4249_RS04455 0.40 +0.7 927,885 + A4249_RS04455 0.40 -0.3 928,233 + +0.2 928,233 + -0.1 928,233 + -0.2 928,343 + A4249_RS04460 0.20 +1.8 928,343 + A4249_RS04460 0.20 -1.0 928,343 + A4249_RS04460 0.20 +0.2 928,343 + A4249_RS04460 0.20 +1.2 928,481 + A4249_RS04460 0.56 -1.3 928,481 + A4249_RS04460 0.56 +0.4 928,481 + A4249_RS04460 0.56 -1.2 928,589 + A4249_RS04460 0.84 -0.4 928,589 + A4249_RS04460 0.84 -0.5 928,589 + A4249_RS04460 0.84 +0.1
Or see this region's nucleotide sequence