Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03810 and A4249_RS03815 overlap by 4 nucleotides A4249_RS03815 and A4249_RS03820 are separated by 104 nucleotides A4249_RS03820 and A4249_RS03825 are separated by 51 nucleotides
A4249_RS03810: A4249_RS03810 - biotin carboxylase N-terminal domain-containing protein, at 804,727 to 806,688
_RS03810
A4249_RS03815: A4249_RS03815 - antibiotic biosynthesis monooxygenase, at 806,685 to 806,975
_RS03815
A4249_RS03820: A4249_RS03820 - DUF1489 domain-containing protein, at 807,080 to 807,478
_RS03820
A4249_RS03825: A4249_RS03825 - MATE family efflux transporter, at 807,530 to 808,888
_RS03825
Position (kb) 807
808 Strain fitness (log2 ratio) -2
-1
0
1 at 806.203 kb on + strand, within A4249_RS03810 at 806.203 kb on + strand, within A4249_RS03810 at 806.203 kb on + strand, within A4249_RS03810 at 806.204 kb on - strand, within A4249_RS03810 at 806.371 kb on + strand, within A4249_RS03810 at 806.371 kb on + strand, within A4249_RS03810 at 806.514 kb on + strand at 806.514 kb on + strand at 806.515 kb on - strand at 806.564 kb on + strand at 806.565 kb on - strand at 806.565 kb on - strand at 806.686 kb on + strand at 806.686 kb on + strand at 806.686 kb on + strand at 806.686 kb on + strand at 806.687 kb on - strand at 806.687 kb on - strand at 806.687 kb on - strand at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.872 kb on + strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.873 kb on - strand, within A4249_RS03815 at 806.960 kb on + strand at 806.971 kb on + strand at 806.971 kb on + strand at 806.971 kb on + strand at 806.971 kb on + strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.972 kb on - strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.975 kb on + strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.976 kb on - strand at 806.985 kb on - strand at 807.031 kb on + strand at 807.032 kb on - strand at 807.032 kb on - strand at 807.058 kb on + strand at 807.059 kb on - strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.068 kb on + strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.069 kb on - strand at 807.172 kb on + strand, within A4249_RS03820 at 807.224 kb on + strand, within A4249_RS03820 at 807.377 kb on + strand, within A4249_RS03820 at 807.377 kb on + strand, within A4249_RS03820 at 807.378 kb on - strand, within A4249_RS03820 at 807.477 kb on - strand at 807.477 kb on - strand at 807.477 kb on - strand at 807.477 kb on - strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.628 kb on + strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.629 kb on - strand at 807.668 kb on + strand, within A4249_RS03825 at 807.668 kb on + strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.669 kb on - strand, within A4249_RS03825 at 807.833 kb on + strand, within A4249_RS03825 at 807.833 kb on + strand, within A4249_RS03825 at 807.833 kb on + strand, within A4249_RS03825 at 807.833 kb on + strand, within A4249_RS03825 at 807.833 kb on + strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.834 kb on - strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.974 kb on + strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 807.975 kb on - strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.083 kb on + strand, within A4249_RS03825 at 808.084 kb on - strand, within A4249_RS03825 at 808.084 kb on - strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.184 kb on + strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.185 kb on - strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.295 kb on + strand, within A4249_RS03825 at 808.296 kb on - strand, within A4249_RS03825 at 808.296 kb on - strand, within A4249_RS03825 at 808.296 kb on - strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.457 kb on + strand, within A4249_RS03825 at 808.458 kb on - strand, within A4249_RS03825 at 808.458 kb on - strand, within A4249_RS03825
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 806,203 + A4249_RS03810 0.75 -0.3 806,203 + A4249_RS03810 0.75 -0.1 806,203 + A4249_RS03810 0.75 -0.8 806,204 - A4249_RS03810 0.75 -0.4 806,371 + A4249_RS03810 0.84 +0.4 806,371 + A4249_RS03810 0.84 -0.3 806,514 + -0.3 806,514 + -0.7 806,515 - +0.1 806,564 + +0.5 806,565 - -0.8 806,565 - -0.3 806,686 + +0.9 806,686 + +0.4 806,686 + +0.8 806,686 + +0.3 806,687 - +0.4 806,687 - +0.4 806,687 - -0.5 806,872 + A4249_RS03815 0.64 +0.7 806,872 + A4249_RS03815 0.64 +0.0 806,872 + A4249_RS03815 0.64 -0.9 806,872 + A4249_RS03815 0.64 -1.2 806,872 + A4249_RS03815 0.64 +0.8 806,872 + A4249_RS03815 0.64 -0.1 806,872 + A4249_RS03815 0.64 +0.2 806,872 + A4249_RS03815 0.64 +0.8 806,872 + A4249_RS03815 0.64 -0.5 806,873 - A4249_RS03815 0.65 +0.0 806,873 - A4249_RS03815 0.65 -0.2 806,873 - A4249_RS03815 0.65 +0.0 806,873 - A4249_RS03815 0.65 -0.1 806,873 - A4249_RS03815 0.65 -1.1 806,873 - A4249_RS03815 0.65 +0.6 806,873 - A4249_RS03815 0.65 +0.4 806,873 - A4249_RS03815 0.65 -0.5 806,873 - A4249_RS03815 0.65 +0.1 806,873 - A4249_RS03815 0.65 +0.5 806,873 - A4249_RS03815 0.65 -1.0 806,873 - A4249_RS03815 0.65 -0.7 806,873 - A4249_RS03815 0.65 +0.3 806,960 + +0.2 806,971 + -0.3 806,971 + -1.5 806,971 + -0.5 806,971 + -0.2 806,972 - +0.7 806,972 - -1.7 806,972 - -0.1 806,972 - -0.3 806,972 - +0.7 806,975 + -0.2 806,975 + +0.2 806,975 + +0.3 806,975 + -1.2 806,975 + -0.6 806,975 + -1.1 806,975 + -0.6 806,975 + +0.8 806,976 - -0.2 806,976 - -1.8 806,976 - -0.1 806,976 - +0.1 806,976 - -0.7 806,976 - -0.5 806,976 - -1.8 806,976 - +0.3 806,976 - -1.2 806,976 - -0.8 806,976 - -0.1 806,976 - -0.5 806,976 - +0.9 806,985 - +0.1 807,031 + -0.3 807,032 - -0.8 807,032 - +0.2 807,058 + -0.3 807,059 - -0.4 807,068 + +0.3 807,068 + -0.8 807,068 + +0.2 807,068 + -0.6 807,068 + -0.5 807,069 - -0.4 807,069 - -0.5 807,069 - +0.3 807,069 - -0.2 807,069 - -0.5 807,069 - +0.0 807,069 - -1.1 807,172 + A4249_RS03820 0.23 -1.0 807,224 + A4249_RS03820 0.36 -0.9 807,377 + A4249_RS03820 0.74 -1.4 807,377 + A4249_RS03820 0.74 +0.4 807,378 - A4249_RS03820 0.75 +0.1 807,477 - +0.0 807,477 - +0.1 807,477 - -0.2 807,477 - +0.2 807,628 + +0.8 807,628 + -0.6 807,628 + -0.4 807,628 + -0.6 807,628 + -0.4 807,629 - -1.5 807,629 - +0.2 807,629 - +0.2 807,629 - -1.2 807,629 - -0.3 807,668 + A4249_RS03825 0.10 +0.2 807,668 + A4249_RS03825 0.10 -0.2 807,669 - A4249_RS03825 0.10 -1.5 807,669 - A4249_RS03825 0.10 +0.7 807,669 - A4249_RS03825 0.10 -1.0 807,669 - A4249_RS03825 0.10 +1.3 807,833 + A4249_RS03825 0.22 -0.0 807,833 + A4249_RS03825 0.22 +0.8 807,833 + A4249_RS03825 0.22 -0.2 807,833 + A4249_RS03825 0.22 +1.0 807,833 + A4249_RS03825 0.22 -0.1 807,834 - A4249_RS03825 0.22 +0.0 807,834 - A4249_RS03825 0.22 +0.9 807,834 - A4249_RS03825 0.22 -0.8 807,834 - A4249_RS03825 0.22 -1.0 807,834 - A4249_RS03825 0.22 -0.0 807,834 - A4249_RS03825 0.22 +0.3 807,834 - A4249_RS03825 0.22 +0.6 807,974 + A4249_RS03825 0.33 +1.2 807,974 + A4249_RS03825 0.33 -0.3 807,974 + A4249_RS03825 0.33 +0.7 807,974 + A4249_RS03825 0.33 +0.8 807,974 + A4249_RS03825 0.33 -0.2 807,974 + A4249_RS03825 0.33 +0.8 807,974 + A4249_RS03825 0.33 -1.5 807,975 - A4249_RS03825 0.33 -0.3 807,975 - A4249_RS03825 0.33 -0.8 807,975 - A4249_RS03825 0.33 -0.4 807,975 - A4249_RS03825 0.33 -0.1 807,975 - A4249_RS03825 0.33 +0.9 807,975 - A4249_RS03825 0.33 +0.0 807,975 - A4249_RS03825 0.33 -1.0 807,975 - A4249_RS03825 0.33 +0.2 808,083 + A4249_RS03825 0.41 +0.4 808,083 + A4249_RS03825 0.41 -0.2 808,083 + A4249_RS03825 0.41 -1.2 808,083 + A4249_RS03825 0.41 -0.6 808,084 - A4249_RS03825 0.41 +0.0 808,084 - A4249_RS03825 0.41 -0.9 808,184 + A4249_RS03825 0.48 +0.2 808,184 + A4249_RS03825 0.48 -0.4 808,184 + A4249_RS03825 0.48 +0.9 808,184 + A4249_RS03825 0.48 +0.2 808,184 + A4249_RS03825 0.48 +0.6 808,185 - A4249_RS03825 0.48 +0.8 808,185 - A4249_RS03825 0.48 -0.1 808,185 - A4249_RS03825 0.48 -0.2 808,185 - A4249_RS03825 0.48 -0.1 808,185 - A4249_RS03825 0.48 +1.2 808,185 - A4249_RS03825 0.48 +0.3 808,185 - A4249_RS03825 0.48 -0.9 808,185 - A4249_RS03825 0.48 +0.3 808,185 - A4249_RS03825 0.48 +0.8 808,185 - A4249_RS03825 0.48 +0.8 808,185 - A4249_RS03825 0.48 +0.0 808,185 - A4249_RS03825 0.48 +0.4 808,295 + A4249_RS03825 0.56 +0.8 808,295 + A4249_RS03825 0.56 +1.5 808,295 + A4249_RS03825 0.56 +0.5 808,295 + A4249_RS03825 0.56 -0.2 808,295 + A4249_RS03825 0.56 -0.2 808,296 - A4249_RS03825 0.56 +0.6 808,296 - A4249_RS03825 0.56 -0.8 808,296 - A4249_RS03825 0.56 -0.2 808,457 + A4249_RS03825 0.68 -0.3 808,457 + A4249_RS03825 0.68 +0.3 808,457 + A4249_RS03825 0.68 -0.0 808,457 + A4249_RS03825 0.68 -0.9 808,457 + A4249_RS03825 0.68 +0.2 808,458 - A4249_RS03825 0.68 -0.4 808,458 - A4249_RS03825 0.68 +0.2
Or see this region's nucleotide sequence