Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03365 and A4249_RS03370 overlap by 4 nucleotides A4249_RS03370 and A4249_RS03375 are separated by 65 nucleotides
A4249_RS03365: A4249_RS03365 - efflux RND transporter permease subunit, at 705,338 to 708,487
_RS03365
A4249_RS03370: A4249_RS03370 - copper-binding protein, at 708,484 to 708,864
_RS03370
A4249_RS03375: A4249_RS03375 - ferredoxin, at 708,930 to 709,343
_RS03375
Position (kb) 708
709 Strain fitness (log2 ratio) -2
-1
0
1
2 at 707.504 kb on + strand, within A4249_RS03365 at 707.504 kb on + strand, within A4249_RS03365 at 707.543 kb on + strand, within A4249_RS03365 at 707.810 kb on + strand, within A4249_RS03365 at 707.810 kb on + strand, within A4249_RS03365 at 707.810 kb on + strand, within A4249_RS03365 at 707.810 kb on + strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.811 kb on - strand, within A4249_RS03365 at 707.909 kb on + strand, within A4249_RS03365 at 707.909 kb on + strand, within A4249_RS03365 at 707.909 kb on + strand, within A4249_RS03365 at 707.910 kb on - strand, within A4249_RS03365 at 707.928 kb on - strand, within A4249_RS03365 at 707.999 kb on + strand, within A4249_RS03365 at 707.999 kb on + strand, within A4249_RS03365 at 707.999 kb on + strand, within A4249_RS03365 at 707.999 kb on + strand, within A4249_RS03365 at 707.999 kb on + strand, within A4249_RS03365 at 708.000 kb on - strand, within A4249_RS03365 at 708.000 kb on - strand, within A4249_RS03365 at 708.000 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.084 kb on - strand, within A4249_RS03365 at 708.176 kb on + strand at 708.176 kb on + strand at 708.177 kb on - strand at 708.177 kb on - strand at 708.412 kb on + strand at 708.412 kb on + strand at 708.413 kb on - strand at 708.413 kb on - strand at 708.413 kb on - strand at 708.413 kb on - strand at 708.413 kb on - strand at 708.413 kb on - strand at 708.414 kb on + strand at 708.426 kb on - strand at 708.426 kb on - strand at 708.718 kb on - strand, within A4249_RS03370 at 708.756 kb on + strand, within A4249_RS03370 at 708.862 kb on + strand at 708.862 kb on + strand at 709.119 kb on - strand, within A4249_RS03375 at 709.258 kb on + strand, within A4249_RS03375 at 709.258 kb on + strand, within A4249_RS03375 at 709.259 kb on - strand, within A4249_RS03375 at 709.259 kb on - strand, within A4249_RS03375 at 709.259 kb on - strand, within A4249_RS03375 at 709.259 kb on - strand, within A4249_RS03375 at 709.337 kb on + strand at 709.337 kb on + strand at 709.337 kb on + strand at 709.338 kb on - strand at 709.338 kb on - strand at 709.338 kb on - strand at 709.338 kb on - strand at 709.338 kb on - strand at 709.408 kb on - strand at 709.482 kb on + strand at 709.483 kb on - strand at 709.490 kb on + strand at 709.490 kb on + strand at 709.490 kb on + strand at 709.491 kb on - strand at 709.491 kb on - strand at 709.491 kb on - strand at 709.491 kb on - strand at 709.527 kb on + strand at 709.528 kb on - strand at 709.545 kb on + strand at 709.545 kb on + strand at 709.545 kb on + strand at 709.545 kb on + strand at 709.545 kb on + strand at 709.545 kb on + strand at 709.545 kb on + strand at 709.546 kb on - strand at 709.546 kb on - strand at 709.546 kb on - strand at 709.546 kb on - strand at 709.546 kb on - strand at 709.546 kb on - strand at 709.546 kb on - strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.631 kb on + strand at 709.632 kb on - strand at 709.632 kb on - strand at 709.632 kb on - strand at 709.632 kb on - strand at 709.632 kb on - strand at 709.655 kb on + strand at 709.737 kb on + strand at 709.763 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 707,504 + A4249_RS03365 0.69 -0.3 707,504 + A4249_RS03365 0.69 +0.7 707,543 + A4249_RS03365 0.70 -0.4 707,810 + A4249_RS03365 0.78 +0.2 707,810 + A4249_RS03365 0.78 +0.3 707,810 + A4249_RS03365 0.78 +0.8 707,810 + A4249_RS03365 0.78 -0.5 707,811 - A4249_RS03365 0.79 -0.9 707,811 - A4249_RS03365 0.79 -0.4 707,811 - A4249_RS03365 0.79 -0.4 707,811 - A4249_RS03365 0.79 -1.0 707,811 - A4249_RS03365 0.79 +0.3 707,811 - A4249_RS03365 0.79 +0.2 707,811 - A4249_RS03365 0.79 -0.4 707,811 - A4249_RS03365 0.79 -0.8 707,811 - A4249_RS03365 0.79 +0.5 707,811 - A4249_RS03365 0.79 -0.4 707,811 - A4249_RS03365 0.79 +0.3 707,909 + A4249_RS03365 0.82 -0.1 707,909 + A4249_RS03365 0.82 -0.2 707,909 + A4249_RS03365 0.82 +0.8 707,910 - A4249_RS03365 0.82 +0.4 707,928 - A4249_RS03365 0.82 -0.2 707,999 + A4249_RS03365 0.84 -0.6 707,999 + A4249_RS03365 0.84 -1.1 707,999 + A4249_RS03365 0.84 -0.2 707,999 + A4249_RS03365 0.84 -1.3 707,999 + A4249_RS03365 0.84 -0.2 708,000 - A4249_RS03365 0.85 -0.7 708,000 - A4249_RS03365 0.85 -0.0 708,000 - A4249_RS03365 0.85 -0.1 708,084 - A4249_RS03365 0.87 +0.1 708,084 - A4249_RS03365 0.87 +0.0 708,084 - A4249_RS03365 0.87 +0.5 708,084 - A4249_RS03365 0.87 +0.7 708,084 - A4249_RS03365 0.87 -0.3 708,084 - A4249_RS03365 0.87 +0.2 708,084 - A4249_RS03365 0.87 +0.2 708,176 + +0.6 708,176 + +1.5 708,177 - -0.7 708,177 - +0.1 708,412 + -1.0 708,412 + +0.7 708,413 - +1.2 708,413 - -1.5 708,413 - -0.0 708,413 - +0.4 708,413 - +0.4 708,413 - -0.8 708,414 + +0.4 708,426 - +0.3 708,426 - +1.5 708,718 - A4249_RS03370 0.61 -0.2 708,756 + A4249_RS03370 0.71 -0.3 708,862 + -0.2 708,862 + -0.1 709,119 - A4249_RS03375 0.46 -2.3 709,258 + A4249_RS03375 0.79 +1.4 709,258 + A4249_RS03375 0.79 +0.2 709,259 - A4249_RS03375 0.79 +0.5 709,259 - A4249_RS03375 0.79 +0.0 709,259 - A4249_RS03375 0.79 -0.7 709,259 - A4249_RS03375 0.79 -0.5 709,337 + -0.9 709,337 + -0.7 709,337 + -1.0 709,338 - +0.6 709,338 - -0.1 709,338 - -1.1 709,338 - +0.1 709,338 - +0.6 709,408 - +0.8 709,482 + -0.4 709,483 - -1.1 709,490 + -0.5 709,490 + -0.5 709,490 + -0.6 709,491 - -0.0 709,491 - +0.0 709,491 - +0.1 709,491 - -0.3 709,527 + +0.0 709,528 - -0.1 709,545 + -0.2 709,545 + -1.7 709,545 + +0.5 709,545 + +0.8 709,545 + -2.0 709,545 + +0.5 709,545 + -0.6 709,546 - -0.6 709,546 - -0.1 709,546 - +0.4 709,546 - +1.2 709,546 - +1.5 709,546 - +1.0 709,546 - +0.5 709,631 + -0.5 709,631 + -0.1 709,631 + -0.4 709,631 + +0.4 709,631 + -1.5 709,631 + -0.4 709,631 + +1.9 709,631 + +0.1 709,631 + -0.5 709,632 - -1.4 709,632 - -0.0 709,632 - +0.2 709,632 - +1.1 709,632 - -0.1 709,655 + -0.2 709,737 + +0.1 709,763 - +0.3
Or see this region's nucleotide sequence