Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02695

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02690 and A4249_RS02695 overlap by 26 nucleotidesA4249_RS02695 and A4249_RS02700 are separated by 68 nucleotidesA4249_RS02700 and A4249_RS17070 are separated by 143 nucleotides A4249_RS02690: A4249_RS02690 - CCA tRNA nucleotidyltransferase, at 573,522 to 574,736 _RS02690 A4249_RS02695: A4249_RS02695 - endonuclease/exonuclease/phosphatase family protein, at 574,711 to 575,667 _RS02695 A4249_RS02700: A4249_RS02700 - DUF4112 domain-containing protein, at 575,736 to 576,197 _RS02700 A4249_RS17070: A4249_RS17070 - DUF2793 domain-containing protein, at 576,341 to 577,777 _RS17070 Position (kb) 574 575 576Strain fitness (log2 ratio) -2 -1 0 1 2at 574.817 kb on + strand, within A4249_RS02695at 574.817 kb on + strand, within A4249_RS02695at 574.818 kb on - strand, within A4249_RS02695at 574.818 kb on - strand, within A4249_RS02695at 574.944 kb on + strand, within A4249_RS02695at 574.945 kb on - strand, within A4249_RS02695at 574.945 kb on - strand, within A4249_RS02695at 574.945 kb on - strand, within A4249_RS02695at 575.036 kb on + strand, within A4249_RS02695at 575.037 kb on - strand, within A4249_RS02695at 575.037 kb on - strand, within A4249_RS02695at 575.042 kb on + strand, within A4249_RS02695at 575.043 kb on - strand, within A4249_RS02695at 575.231 kb on + strand, within A4249_RS02695at 575.232 kb on - strand, within A4249_RS02695at 575.232 kb on - strand, within A4249_RS02695at 575.232 kb on - strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.354 kb on + strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.355 kb on - strand, within A4249_RS02695at 575.369 kb on + strand, within A4249_RS02695at 575.369 kb on + strand, within A4249_RS02695at 575.369 kb on + strand, within A4249_RS02695at 575.370 kb on - strand, within A4249_RS02695at 575.370 kb on - strand, within A4249_RS02695at 575.485 kb on + strand, within A4249_RS02695at 575.486 kb on - strand, within A4249_RS02695at 575.656 kb on + strandat 575.656 kb on + strandat 575.657 kb on - strandat 575.657 kb on - strandat 575.657 kb on - strandat 575.676 kb on + strandat 575.676 kb on + strandat 575.676 kb on + strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.677 kb on - strandat 575.883 kb on + strand, within A4249_RS02700at 575.883 kb on + strand, within A4249_RS02700at 575.884 kb on - strand, within A4249_RS02700at 575.884 kb on - strand, within A4249_RS02700at 575.884 kb on - strand, within A4249_RS02700at 575.885 kb on + strand, within A4249_RS02700at 575.885 kb on + strand, within A4249_RS02700at 575.885 kb on + strand, within A4249_RS02700at 575.885 kb on + strand, within A4249_RS02700at 575.885 kb on + strand, within A4249_RS02700at 575.886 kb on - strand, within A4249_RS02700at 575.886 kb on - strand, within A4249_RS02700at 575.886 kb on - strand, within A4249_RS02700at 575.886 kb on - strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.967 kb on + strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.968 kb on - strand, within A4249_RS02700at 575.969 kb on + strand, within A4249_RS02700at 575.969 kb on + strand, within A4249_RS02700at 575.969 kb on + strand, within A4249_RS02700at 575.969 kb on + strand, within A4249_RS02700at 575.969 kb on + strand, within A4249_RS02700at 575.969 kb on + strand, within A4249_RS02700at 575.970 kb on - strand, within A4249_RS02700at 575.970 kb on - strand, within A4249_RS02700at 575.970 kb on - strand, within A4249_RS02700at 575.970 kb on - strand, within A4249_RS02700at 576.183 kb on + strandat 576.183 kb on + strandat 576.183 kb on + strandat 576.183 kb on + strandat 576.183 kb on + strandat 576.184 kb on - strandat 576.184 kb on - strandat 576.184 kb on - strandat 576.219 kb on + strandat 576.219 kb on + strandat 576.219 kb on + strandat 576.220 kb on - strandat 576.220 kb on - strandat 576.377 kb on + strandat 576.418 kb on + strandat 576.418 kb on + strandat 576.418 kb on + strandat 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.512 kb on + strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.513 kb on - strand, within A4249_RS17070at 576.514 kb on + strand, within A4249_RS17070at 576.514 kb on + strand, within A4249_RS17070at 576.514 kb on + strand, within A4249_RS17070at 576.515 kb on - strand, within A4249_RS17070at 576.515 kb on - strand, within A4249_RS17070at 576.515 kb on - strand, within A4249_RS17070

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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574,817 + A4249_RS02695 0.11 -1.0
574,817 + A4249_RS02695 0.11 -0.5
574,818 - A4249_RS02695 0.11 -0.2
574,818 - A4249_RS02695 0.11 +0.5
574,944 + A4249_RS02695 0.24 +0.7
574,945 - A4249_RS02695 0.24 +0.0
574,945 - A4249_RS02695 0.24 +0.8
574,945 - A4249_RS02695 0.24 -0.5
575,036 + A4249_RS02695 0.34 -1.3
575,037 - A4249_RS02695 0.34 +0.9
575,037 - A4249_RS02695 0.34 -0.5
575,042 + A4249_RS02695 0.35 -0.5
575,043 - A4249_RS02695 0.35 -1.3
575,231 + A4249_RS02695 0.54 -0.4
575,232 - A4249_RS02695 0.54 -1.3
575,232 - A4249_RS02695 0.54 +0.2
575,232 - A4249_RS02695 0.54 +0.2
575,354 + A4249_RS02695 0.67 -0.2
575,354 + A4249_RS02695 0.67 -1.1
575,354 + A4249_RS02695 0.67 +0.9
575,354 + A4249_RS02695 0.67 +1.8
575,354 + A4249_RS02695 0.67 -0.1
575,354 + A4249_RS02695 0.67 -0.8
575,354 + A4249_RS02695 0.67 +0.2
575,354 + A4249_RS02695 0.67 +0.4
575,354 + A4249_RS02695 0.67 -0.6
575,354 + A4249_RS02695 0.67 +0.4
575,354 + A4249_RS02695 0.67 -1.6
575,355 - A4249_RS02695 0.67 +0.2
575,355 - A4249_RS02695 0.67 +0.4
575,355 - A4249_RS02695 0.67 +0.3
575,355 - A4249_RS02695 0.67 -0.7
575,355 - A4249_RS02695 0.67 -0.3
575,355 - A4249_RS02695 0.67 +0.4
575,355 - A4249_RS02695 0.67 -0.4
575,355 - A4249_RS02695 0.67 -0.1
575,355 - A4249_RS02695 0.67 -0.3
575,355 - A4249_RS02695 0.67 -0.5
575,355 - A4249_RS02695 0.67 -0.3
575,355 - A4249_RS02695 0.67 -0.5
575,355 - A4249_RS02695 0.67 +0.4
575,369 + A4249_RS02695 0.69 +0.6
575,369 + A4249_RS02695 0.69 +1.2
575,369 + A4249_RS02695 0.69 -0.8
575,370 - A4249_RS02695 0.69 -0.1
575,370 - A4249_RS02695 0.69 +0.0
575,485 + A4249_RS02695 0.81 -0.4
575,486 - A4249_RS02695 0.81 -2.1
575,656 + -1.0
575,656 + -0.6
575,657 - -0.9
575,657 - +0.4
575,657 - +1.7
575,676 + +1.0
575,676 + +0.7
575,676 + -0.8
575,677 - +1.7
575,677 - -1.2
575,677 - -0.3
575,677 - +0.3
575,677 - -0.8
575,677 - +0.0
575,677 - +0.3
575,677 - -1.0
575,677 - +0.5
575,677 - -1.0
575,677 - +0.8
575,677 - +0.3
575,677 - +0.2
575,677 - -1.5
575,883 + A4249_RS02700 0.32 -0.2
575,883 + A4249_RS02700 0.32 -0.5
575,884 - A4249_RS02700 0.32 +0.4
575,884 - A4249_RS02700 0.32 -0.1
575,884 - A4249_RS02700 0.32 +0.1
575,885 + A4249_RS02700 0.32 -0.1
575,885 + A4249_RS02700 0.32 -0.2
575,885 + A4249_RS02700 0.32 +0.0
575,885 + A4249_RS02700 0.32 +0.1
575,885 + A4249_RS02700 0.32 -0.2
575,886 - A4249_RS02700 0.32 -0.0
575,886 - A4249_RS02700 0.32 -0.1
575,886 - A4249_RS02700 0.32 -0.2
575,886 - A4249_RS02700 0.32 -0.4
575,967 + A4249_RS02700 0.50 -0.1
575,967 + A4249_RS02700 0.50 +0.1
575,967 + A4249_RS02700 0.50 -0.9
575,967 + A4249_RS02700 0.50 -0.7
575,967 + A4249_RS02700 0.50 -0.6
575,967 + A4249_RS02700 0.50 -0.2
575,967 + A4249_RS02700 0.50 -1.0
575,967 + A4249_RS02700 0.50 -0.2
575,967 + A4249_RS02700 0.50 -0.2
575,967 + A4249_RS02700 0.50 -0.2
575,967 + A4249_RS02700 0.50 +0.1
575,967 + A4249_RS02700 0.50 -0.7
575,967 + A4249_RS02700 0.50 -0.3
575,967 + A4249_RS02700 0.50 +0.0
575,967 + A4249_RS02700 0.50 -0.5
575,967 + A4249_RS02700 0.50 -0.4
575,967 + A4249_RS02700 0.50 +0.2
575,967 + A4249_RS02700 0.50 +0.1
575,968 - A4249_RS02700 0.50 -0.3
575,968 - A4249_RS02700 0.50 -0.3
575,968 - A4249_RS02700 0.50 -0.1
575,968 - A4249_RS02700 0.50 -0.4
575,968 - A4249_RS02700 0.50 -0.3
575,968 - A4249_RS02700 0.50 -0.3
575,968 - A4249_RS02700 0.50 +0.1
575,968 - A4249_RS02700 0.50 -0.3
575,968 - A4249_RS02700 0.50 +0.1
575,968 - A4249_RS02700 0.50 +0.1
575,968 - A4249_RS02700 0.50 -0.2
575,968 - A4249_RS02700 0.50 +0.3
575,968 - A4249_RS02700 0.50 +0.0
575,969 + A4249_RS02700 0.50 -0.4
575,969 + A4249_RS02700 0.50 -0.3
575,969 + A4249_RS02700 0.50 -0.1
575,969 + A4249_RS02700 0.50 -0.2
575,969 + A4249_RS02700 0.50 -0.4
575,969 + A4249_RS02700 0.50 -0.1
575,970 - A4249_RS02700 0.51 -0.2
575,970 - A4249_RS02700 0.51 -0.2
575,970 - A4249_RS02700 0.51 +0.6
575,970 - A4249_RS02700 0.51 +0.2
576,183 + -0.5
576,183 + +0.0
576,183 + -0.6
576,183 + -0.5
576,183 + -0.1
576,184 - -0.3
576,184 - -0.7
576,184 - -0.2
576,219 + -0.4
576,219 + +0.3
576,219 + -0.5
576,220 - -0.2
576,220 - +0.1
576,377 + -0.5
576,418 + -0.1
576,418 + +0.0
576,418 + +0.1
576,512 + A4249_RS17070 0.12 +1.7
576,512 + A4249_RS17070 0.12 -0.5
576,512 + A4249_RS17070 0.12 -0.9
576,512 + A4249_RS17070 0.12 -1.1
576,512 + A4249_RS17070 0.12 +0.4
576,512 + A4249_RS17070 0.12 +0.2
576,512 + A4249_RS17070 0.12 -0.6
576,512 + A4249_RS17070 0.12 -0.5
576,512 + A4249_RS17070 0.12 -0.6
576,512 + A4249_RS17070 0.12 -0.3
576,512 + A4249_RS17070 0.12 -0.3
576,512 + A4249_RS17070 0.12 -1.1
576,513 - A4249_RS17070 0.12 -0.9
576,513 - A4249_RS17070 0.12 +0.3
576,513 - A4249_RS17070 0.12 +0.0
576,513 - A4249_RS17070 0.12 +0.5
576,513 - A4249_RS17070 0.12 -0.1
576,513 - A4249_RS17070 0.12 -1.1
576,513 - A4249_RS17070 0.12 +0.5
576,513 - A4249_RS17070 0.12 +0.1
576,513 - A4249_RS17070 0.12 -0.4
576,513 - A4249_RS17070 0.12 -0.5
576,513 - A4249_RS17070 0.12 +0.2
576,513 - A4249_RS17070 0.12 -0.5
576,513 - A4249_RS17070 0.12 +0.6
576,513 - A4249_RS17070 0.12 +0.2
576,513 - A4249_RS17070 0.12 -0.2
576,514 + A4249_RS17070 0.12 +0.2
576,514 + A4249_RS17070 0.12 -0.2
576,514 + A4249_RS17070 0.12 -0.9
576,515 - A4249_RS17070 0.12 -0.8
576,515 - A4249_RS17070 0.12 +0.2
576,515 - A4249_RS17070 0.12 -0.1

Or see this region's nucleotide sequence