Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02475 and A4249_RS16215 are separated by 19 nucleotides A4249_RS16215 and A4249_RS02485 overlap by 4 nucleotides A4249_RS02485 and A4249_RS02490 overlap by 4 nucleotides
A4249_RS02475: A4249_RS02475 - IS3 family transposase, at 531,418 to 532,607
_RS02475
A4249_RS16215: A4249_RS16215 - biotin/lipoyl-binding protein, at 532,627 to 532,869
_RS16215
A4249_RS02485: A4249_RS02485 - methylmalonyl-CoA mutase family protein, at 532,866 to 534,251
_RS02485
A4249_RS02490: A4249_RS02490 - methylmalonyl-CoA mutase, at 534,248 to 536,407
_RS02490
Position (kb) 532
533
534
535 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.993 kb on - strand at 532.993 kb on - strand at 532.993 kb on - strand at 533.318 kb on + strand, within A4249_RS02485 at 533.319 kb on - strand, within A4249_RS02485 at 533.319 kb on - strand, within A4249_RS02485 at 533.396 kb on + strand, within A4249_RS02485 at 533.396 kb on + strand, within A4249_RS02485 at 533.607 kb on + strand, within A4249_RS02485 at 533.608 kb on - strand, within A4249_RS02485 at 533.608 kb on - strand, within A4249_RS02485 at 533.937 kb on + strand, within A4249_RS02485 at 533.938 kb on - strand, within A4249_RS02485 at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.123 kb on + strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.124 kb on - strand at 534.246 kb on - strand at 534.246 kb on - strand at 534.246 kb on - strand at 534.246 kb on - strand at 534.250 kb on + strand at 534.356 kb on + strand at 534.356 kb on + strand at 534.357 kb on - strand at 534.431 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.443 kb on + strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.444 kb on - strand at 534.474 kb on - strand, within A4249_RS02490 at 534.474 kb on - strand, within A4249_RS02490 at 534.474 kb on - strand, within A4249_RS02490 at 534.512 kb on + strand, within A4249_RS02490 at 534.512 kb on + strand, within A4249_RS02490 at 534.513 kb on - strand, within A4249_RS02490 at 534.513 kb on - strand, within A4249_RS02490 at 534.513 kb on - strand, within A4249_RS02490 at 534.513 kb on - strand, within A4249_RS02490 at 534.513 kb on - strand, within A4249_RS02490 at 534.581 kb on + strand, within A4249_RS02490 at 534.581 kb on + strand, within A4249_RS02490 at 534.581 kb on + strand, within A4249_RS02490 at 534.582 kb on - strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.647 kb on + strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.648 kb on - strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.740 kb on + strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.741 kb on - strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.836 kb on + strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.837 kb on - strand, within A4249_RS02490 at 534.842 kb on + strand, within A4249_RS02490 at 534.842 kb on + strand, within A4249_RS02490 at 534.842 kb on + strand, within A4249_RS02490 at 534.842 kb on + strand, within A4249_RS02490 at 534.843 kb on - strand, within A4249_RS02490 at 534.843 kb on - strand, within A4249_RS02490 at 534.843 kb on - strand, within A4249_RS02490 at 534.843 kb on - strand, within A4249_RS02490 at 534.843 kb on - strand, within A4249_RS02490 at 534.980 kb on + strand, within A4249_RS02490 at 534.980 kb on + strand, within A4249_RS02490 at 534.981 kb on - strand, within A4249_RS02490 at 534.982 kb on + strand, within A4249_RS02490 at 534.982 kb on + strand, within A4249_RS02490 at 534.982 kb on + strand, within A4249_RS02490 at 534.982 kb on + strand, within A4249_RS02490 at 534.982 kb on + strand, within A4249_RS02490 at 534.983 kb on - strand, within A4249_RS02490 at 534.983 kb on - strand, within A4249_RS02490 at 535.004 kb on + strand, within A4249_RS02490 at 535.004 kb on + strand, within A4249_RS02490 at 535.005 kb on - strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.088 kb on + strand, within A4249_RS02490 at 535.089 kb on - strand, within A4249_RS02490 at 535.089 kb on - strand, within A4249_RS02490 at 535.089 kb on - strand, within A4249_RS02490 at 535.182 kb on + strand, within A4249_RS02490 at 535.183 kb on - strand, within A4249_RS02490
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 532,583 + -0.6 532,583 + -0.2 532,583 + +0.1 532,993 - -0.5 532,993 - +1.0 532,993 - -0.9 533,318 + A4249_RS02485 0.33 -0.3 533,319 - A4249_RS02485 0.33 -1.1 533,319 - A4249_RS02485 0.33 -0.6 533,396 + A4249_RS02485 0.38 -1.0 533,396 + A4249_RS02485 0.38 -0.7 533,607 + A4249_RS02485 0.53 +0.3 533,608 - A4249_RS02485 0.54 +0.2 533,608 - A4249_RS02485 0.54 +0.1 533,937 + A4249_RS02485 0.77 +1.2 533,938 - A4249_RS02485 0.77 -0.8 534,123 + -0.3 534,123 + +0.8 534,123 + -0.2 534,123 + +1.3 534,123 + -0.0 534,123 + -0.7 534,123 + -0.1 534,123 + -0.7 534,123 + -0.0 534,124 - +1.2 534,124 - -0.5 534,124 - +0.1 534,124 - -1.0 534,124 - -0.8 534,124 - -0.0 534,124 - +0.3 534,124 - +0.2 534,124 - -0.3 534,124 - -0.1 534,124 - +0.5 534,246 - +1.4 534,246 - -0.7 534,246 - -0.4 534,246 - +0.1 534,250 + -1.9 534,356 + +0.4 534,356 + -0.3 534,357 - +0.0 534,431 + -0.3 534,443 + -0.9 534,443 + -0.1 534,443 + -0.2 534,443 + -0.4 534,443 + -1.2 534,443 + +1.0 534,443 + +0.4 534,443 + -0.1 534,443 + +0.4 534,443 + -0.1 534,443 + -0.4 534,443 + -0.3 534,443 + +0.1 534,443 + -0.6 534,443 + +0.2 534,443 + +0.8 534,443 + -0.2 534,443 + +0.7 534,443 + -0.7 534,443 + -1.5 534,443 + +2.2 534,443 + +0.4 534,443 + -0.4 534,443 + +0.1 534,444 - +1.0 534,444 - +0.5 534,444 - -0.2 534,444 - +0.0 534,444 - +0.3 534,444 - -0.3 534,444 - -0.6 534,444 - -0.0 534,444 - +0.5 534,474 - A4249_RS02490 0.10 +0.4 534,474 - A4249_RS02490 0.10 -1.2 534,474 - A4249_RS02490 0.10 +0.4 534,512 + A4249_RS02490 0.12 -1.0 534,512 + A4249_RS02490 0.12 -1.5 534,513 - A4249_RS02490 0.12 -0.4 534,513 - A4249_RS02490 0.12 +0.7 534,513 - A4249_RS02490 0.12 +0.4 534,513 - A4249_RS02490 0.12 +0.4 534,513 - A4249_RS02490 0.12 -0.6 534,581 + A4249_RS02490 0.15 +0.9 534,581 + A4249_RS02490 0.15 -0.7 534,581 + A4249_RS02490 0.15 -0.3 534,582 - A4249_RS02490 0.15 +0.3 534,647 + A4249_RS02490 0.18 +0.3 534,647 + A4249_RS02490 0.18 +0.6 534,647 + A4249_RS02490 0.18 +1.0 534,647 + A4249_RS02490 0.18 +0.9 534,647 + A4249_RS02490 0.18 -0.1 534,647 + A4249_RS02490 0.18 -0.0 534,647 + A4249_RS02490 0.18 -1.7 534,647 + A4249_RS02490 0.18 +1.3 534,648 - A4249_RS02490 0.19 +0.1 534,648 - A4249_RS02490 0.19 -1.2 534,648 - A4249_RS02490 0.19 +1.2 534,648 - A4249_RS02490 0.19 +0.5 534,648 - A4249_RS02490 0.19 -0.1 534,648 - A4249_RS02490 0.19 -0.3 534,648 - A4249_RS02490 0.19 -1.0 534,648 - A4249_RS02490 0.19 +0.4 534,648 - A4249_RS02490 0.19 +0.3 534,648 - A4249_RS02490 0.19 -0.5 534,740 + A4249_RS02490 0.23 -0.6 534,740 + A4249_RS02490 0.23 +0.2 534,740 + A4249_RS02490 0.23 -0.8 534,740 + A4249_RS02490 0.23 -0.4 534,740 + A4249_RS02490 0.23 +0.1 534,740 + A4249_RS02490 0.23 -0.1 534,740 + A4249_RS02490 0.23 -0.3 534,740 + A4249_RS02490 0.23 +0.1 534,741 - A4249_RS02490 0.23 +0.4 534,741 - A4249_RS02490 0.23 +0.0 534,741 - A4249_RS02490 0.23 -0.1 534,741 - A4249_RS02490 0.23 +0.5 534,741 - A4249_RS02490 0.23 -0.2 534,741 - A4249_RS02490 0.23 -0.4 534,741 - A4249_RS02490 0.23 -1.7 534,741 - A4249_RS02490 0.23 -0.1 534,741 - A4249_RS02490 0.23 +0.2 534,836 + A4249_RS02490 0.27 +1.0 534,836 + A4249_RS02490 0.27 +1.4 534,836 + A4249_RS02490 0.27 -0.6 534,836 + A4249_RS02490 0.27 -2.4 534,836 + A4249_RS02490 0.27 +0.2 534,836 + A4249_RS02490 0.27 -0.2 534,836 + A4249_RS02490 0.27 -1.7 534,836 + A4249_RS02490 0.27 -0.5 534,836 + A4249_RS02490 0.27 +0.8 534,836 + A4249_RS02490 0.27 +0.0 534,836 + A4249_RS02490 0.27 +0.1 534,836 + A4249_RS02490 0.27 +1.2 534,836 + A4249_RS02490 0.27 -1.4 534,836 + A4249_RS02490 0.27 -0.4 534,837 - A4249_RS02490 0.27 +0.3 534,837 - A4249_RS02490 0.27 +0.3 534,837 - A4249_RS02490 0.27 -2.0 534,837 - A4249_RS02490 0.27 +0.8 534,837 - A4249_RS02490 0.27 -0.8 534,837 - A4249_RS02490 0.27 +0.2 534,837 - A4249_RS02490 0.27 +0.4 534,837 - A4249_RS02490 0.27 +0.0 534,837 - A4249_RS02490 0.27 -0.2 534,837 - A4249_RS02490 0.27 -0.1 534,837 - A4249_RS02490 0.27 -0.1 534,837 - A4249_RS02490 0.27 +0.2 534,837 - A4249_RS02490 0.27 +0.6 534,837 - A4249_RS02490 0.27 -0.4 534,837 - A4249_RS02490 0.27 -0.7 534,837 - A4249_RS02490 0.27 -0.6 534,842 + A4249_RS02490 0.28 +0.2 534,842 + A4249_RS02490 0.28 +1.1 534,842 + A4249_RS02490 0.28 -0.3 534,842 + A4249_RS02490 0.28 -0.0 534,843 - A4249_RS02490 0.28 -0.1 534,843 - A4249_RS02490 0.28 -0.2 534,843 - A4249_RS02490 0.28 -0.3 534,843 - A4249_RS02490 0.28 -1.4 534,843 - A4249_RS02490 0.28 -0.9 534,980 + A4249_RS02490 0.34 +0.3 534,980 + A4249_RS02490 0.34 -2.8 534,981 - A4249_RS02490 0.34 -0.7 534,982 + A4249_RS02490 0.34 -0.4 534,982 + A4249_RS02490 0.34 +0.2 534,982 + A4249_RS02490 0.34 +0.3 534,982 + A4249_RS02490 0.34 +0.6 534,982 + A4249_RS02490 0.34 -0.6 534,983 - A4249_RS02490 0.34 +0.1 534,983 - A4249_RS02490 0.34 +0.5 535,004 + A4249_RS02490 0.35 -0.5 535,004 + A4249_RS02490 0.35 +0.8 535,005 - A4249_RS02490 0.35 +0.8 535,088 + A4249_RS02490 0.39 +0.4 535,088 + A4249_RS02490 0.39 +0.7 535,088 + A4249_RS02490 0.39 -0.3 535,088 + A4249_RS02490 0.39 -0.2 535,088 + A4249_RS02490 0.39 -0.2 535,088 + A4249_RS02490 0.39 -0.6 535,088 + A4249_RS02490 0.39 +1.2 535,089 - A4249_RS02490 0.39 +0.9 535,089 - A4249_RS02490 0.39 +0.4 535,089 - A4249_RS02490 0.39 -2.0 535,182 + A4249_RS02490 0.43 -0.5 535,183 - A4249_RS02490 0.43 -0.1
Or see this region's nucleotide sequence