Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01965 and A4249_RS01970 overlap by 4 nucleotides A4249_RS01970 and A4249_RS01975 are separated by 1 nucleotides A4249_RS01975 and A4249_RS01980 are separated by 189 nucleotides
A4249_RS01965: A4249_RS01965 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 395,077 to 395,718
_RS01965
A4249_RS01970: A4249_RS01970 - 2-dehydro-3-deoxygalactonokinase, at 395,715 to 396,605
_RS01970
A4249_RS01975: A4249_RS01975 - sodium/sugar symporter, at 396,607 to 398,181
_RS01975
A4249_RS01980: A4249_RS01980 - helix-turn-helix domain-containing protein, at 398,371 to 399,144
_RS01980
Position (kb) 396
397
398
399 Strain fitness (log2 ratio) -2
-1
0
1
2 at 395.821 kb on + strand, within A4249_RS01970 at 395.822 kb on - strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.920 kb on + strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 395.921 kb on - strand, within A4249_RS01970 at 396.092 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.364 kb on + strand, within A4249_RS01970 at 396.365 kb on - strand, within A4249_RS01970 at 396.365 kb on - strand, within A4249_RS01970 at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.621 kb on + strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.622 kb on - strand at 396.623 kb on + strand at 396.623 kb on + strand at 396.623 kb on + strand at 396.624 kb on - strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.686 kb on + strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 396.687 kb on - strand at 397.104 kb on - strand, within A4249_RS01975 at 397.104 kb on - strand, within A4249_RS01975 at 397.104 kb on - strand, within A4249_RS01975 at 397.233 kb on - strand, within A4249_RS01975 at 397.322 kb on + strand, within A4249_RS01975 at 397.322 kb on + strand, within A4249_RS01975 at 397.323 kb on - strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.391 kb on + strand, within A4249_RS01975 at 397.392 kb on - strand, within A4249_RS01975 at 397.392 kb on - strand, within A4249_RS01975 at 397.392 kb on - strand, within A4249_RS01975 at 397.392 kb on - strand, within A4249_RS01975 at 397.392 kb on - strand, within A4249_RS01975 at 397.392 kb on - strand, within A4249_RS01975 at 397.409 kb on + strand, within A4249_RS01975 at 397.409 kb on + strand, within A4249_RS01975 at 397.409 kb on + strand, within A4249_RS01975 at 397.410 kb on - strand, within A4249_RS01975 at 397.410 kb on - strand, within A4249_RS01975 at 397.410 kb on - strand, within A4249_RS01975 at 397.410 kb on - strand, within A4249_RS01975 at 397.470 kb on - strand, within A4249_RS01975 at 397.470 kb on - strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.524 kb on + strand, within A4249_RS01975 at 397.525 kb on - strand, within A4249_RS01975 at 397.525 kb on - strand, within A4249_RS01975 at 397.525 kb on - strand, within A4249_RS01975 at 397.525 kb on - strand, within A4249_RS01975 at 397.525 kb on - strand, within A4249_RS01975 at 397.525 kb on - strand, within A4249_RS01975 at 397.670 kb on + strand, within A4249_RS01975 at 397.671 kb on - strand, within A4249_RS01975 at 397.671 kb on - strand, within A4249_RS01975 at 397.706 kb on + strand, within A4249_RS01975 at 397.706 kb on + strand, within A4249_RS01975 at 397.707 kb on - strand, within A4249_RS01975 at 397.707 kb on - strand, within A4249_RS01975 at 397.707 kb on - strand, within A4249_RS01975 at 397.784 kb on + strand, within A4249_RS01975 at 397.785 kb on - strand, within A4249_RS01975 at 397.785 kb on - strand, within A4249_RS01975 at 397.785 kb on - strand, within A4249_RS01975 at 397.785 kb on - strand, within A4249_RS01975 at 397.785 kb on - strand, within A4249_RS01975 at 397.937 kb on + strand, within A4249_RS01975 at 397.937 kb on + strand, within A4249_RS01975 at 397.937 kb on + strand, within A4249_RS01975 at 397.938 kb on - strand, within A4249_RS01975 at 397.938 kb on - strand, within A4249_RS01975 at 397.964 kb on + strand, within A4249_RS01975 at 397.964 kb on + strand, within A4249_RS01975 at 397.964 kb on + strand, within A4249_RS01975 at 397.965 kb on - strand, within A4249_RS01975 at 397.965 kb on - strand, within A4249_RS01975 at 397.965 kb on - strand, within A4249_RS01975 at 397.965 kb on - strand, within A4249_RS01975 at 398.066 kb on + strand at 398.067 kb on - strand at 398.067 kb on - strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.141 kb on + strand at 398.142 kb on - strand at 398.142 kb on - strand at 398.142 kb on - strand at 398.142 kb on - strand at 398.142 kb on - strand at 398.142 kb on - strand at 398.181 kb on + strand at 398.181 kb on + strand at 398.181 kb on + strand at 398.181 kb on + strand at 398.181 kb on + strand at 398.182 kb on - strand at 398.182 kb on - strand at 398.182 kb on - strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.184 kb on + strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.185 kb on - strand at 398.215 kb on + strand at 398.215 kb on + strand at 398.216 kb on - strand at 398.216 kb on - strand at 398.216 kb on - strand at 398.227 kb on + strand at 398.227 kb on + strand at 398.227 kb on + strand at 398.227 kb on + strand at 398.227 kb on + strand at 398.227 kb on + strand at 398.227 kb on + strand at 398.228 kb on - strand at 398.228 kb on - strand at 398.228 kb on - strand at 398.228 kb on - strand at 398.228 kb on - strand at 398.261 kb on + strand at 398.261 kb on + strand at 398.261 kb on + strand at 398.262 kb on - strand at 398.262 kb on - strand at 398.263 kb on + strand at 398.264 kb on - strand at 398.347 kb on + strand at 398.348 kb on - strand at 398.348 kb on - strand at 398.348 kb on - strand at 398.348 kb on - strand at 398.348 kb on - strand at 398.348 kb on - strand at 398.404 kb on + strand at 398.404 kb on + strand at 398.404 kb on + strand at 398.404 kb on + strand at 398.554 kb on + strand, within A4249_RS01980 at 398.554 kb on + strand, within A4249_RS01980 at 398.554 kb on + strand, within A4249_RS01980 at 398.554 kb on + strand, within A4249_RS01980 at 398.555 kb on - strand, within A4249_RS01980 at 398.555 kb on - strand, within A4249_RS01980 at 398.555 kb on - strand, within A4249_RS01980 at 398.556 kb on + strand, within A4249_RS01980 at 398.556 kb on + strand, within A4249_RS01980 at 398.764 kb on + strand, within A4249_RS01980 at 398.764 kb on + strand, within A4249_RS01980 at 398.824 kb on + strand, within A4249_RS01980 at 398.825 kb on - strand, within A4249_RS01980 at 398.825 kb on - strand, within A4249_RS01980 at 398.867 kb on + strand, within A4249_RS01980 at 398.867 kb on + strand, within A4249_RS01980 at 398.867 kb on + strand, within A4249_RS01980 at 398.868 kb on - strand, within A4249_RS01980 at 398.868 kb on - strand, within A4249_RS01980 at 398.888 kb on + strand, within A4249_RS01980 at 398.888 kb on + strand, within A4249_RS01980 at 398.889 kb on - strand, within A4249_RS01980 at 398.941 kb on + strand, within A4249_RS01980 at 398.941 kb on + strand, within A4249_RS01980 at 398.941 kb on + strand, within A4249_RS01980 at 398.941 kb on + strand, within A4249_RS01980 at 398.941 kb on + strand, within A4249_RS01980 at 398.942 kb on - strand, within A4249_RS01980 at 398.942 kb on - strand, within A4249_RS01980 at 398.942 kb on - strand, within A4249_RS01980 at 398.942 kb on - strand, within A4249_RS01980 at 399.031 kb on - strand, within A4249_RS01980 at 399.031 kb on - strand, within A4249_RS01980 at 399.031 kb on - strand, within A4249_RS01980 at 399.031 kb on - strand, within A4249_RS01980 at 399.149 kb on + strand at 399.149 kb on + strand at 399.149 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 395,821 + A4249_RS01970 0.12 -0.7 395,822 - A4249_RS01970 0.12 -0.6 395,920 + A4249_RS01970 0.23 -0.7 395,920 + A4249_RS01970 0.23 -0.5 395,920 + A4249_RS01970 0.23 -1.0 395,920 + A4249_RS01970 0.23 +0.2 395,920 + A4249_RS01970 0.23 -0.6 395,920 + A4249_RS01970 0.23 -1.3 395,920 + A4249_RS01970 0.23 +1.5 395,920 + A4249_RS01970 0.23 +0.8 395,920 + A4249_RS01970 0.23 -0.3 395,920 + A4249_RS01970 0.23 +0.1 395,921 - A4249_RS01970 0.23 -0.3 395,921 - A4249_RS01970 0.23 -0.9 395,921 - A4249_RS01970 0.23 -0.6 395,921 - A4249_RS01970 0.23 +0.2 395,921 - A4249_RS01970 0.23 -0.8 396,092 + A4249_RS01970 0.42 +1.5 396,364 + A4249_RS01970 0.73 +0.1 396,364 + A4249_RS01970 0.73 -0.0 396,364 + A4249_RS01970 0.73 +1.2 396,364 + A4249_RS01970 0.73 +0.4 396,364 + A4249_RS01970 0.73 +0.6 396,364 + A4249_RS01970 0.73 -0.4 396,365 - A4249_RS01970 0.73 +0.2 396,365 - A4249_RS01970 0.73 -0.6 396,621 + -1.9 396,621 + -1.5 396,621 + +0.2 396,621 + -0.7 396,621 + -0.0 396,621 + +0.6 396,621 + +0.2 396,621 + -0.4 396,621 + -0.5 396,622 - -0.6 396,622 - +0.7 396,622 - +0.1 396,622 - -0.4 396,622 - +0.0 396,623 + +0.9 396,623 + -0.5 396,623 + +0.2 396,624 - +0.4 396,686 + -0.2 396,686 + -0.0 396,686 + -0.1 396,686 + -0.2 396,686 + -2.1 396,686 + -0.9 396,686 + +0.2 396,686 + -0.3 396,686 + -0.7 396,686 + -0.0 396,686 + -0.4 396,687 - -0.2 396,687 - +0.3 396,687 - +0.4 396,687 - -0.1 396,687 - -0.4 396,687 - +0.1 397,104 - A4249_RS01975 0.32 -0.2 397,104 - A4249_RS01975 0.32 +0.6 397,104 - A4249_RS01975 0.32 -0.3 397,233 - A4249_RS01975 0.40 -0.7 397,322 + A4249_RS01975 0.45 -1.3 397,322 + A4249_RS01975 0.45 +0.5 397,323 - A4249_RS01975 0.45 -1.1 397,391 + A4249_RS01975 0.50 +1.4 397,391 + A4249_RS01975 0.50 -0.6 397,391 + A4249_RS01975 0.50 +0.2 397,391 + A4249_RS01975 0.50 -1.4 397,391 + A4249_RS01975 0.50 -0.2 397,391 + A4249_RS01975 0.50 -0.1 397,391 + A4249_RS01975 0.50 -0.6 397,391 + A4249_RS01975 0.50 +0.1 397,391 + A4249_RS01975 0.50 +0.3 397,392 - A4249_RS01975 0.50 +0.5 397,392 - A4249_RS01975 0.50 +0.5 397,392 - A4249_RS01975 0.50 -0.2 397,392 - A4249_RS01975 0.50 -0.0 397,392 - A4249_RS01975 0.50 +0.4 397,392 - A4249_RS01975 0.50 -0.2 397,409 + A4249_RS01975 0.51 -0.3 397,409 + A4249_RS01975 0.51 -1.4 397,409 + A4249_RS01975 0.51 +0.1 397,410 - A4249_RS01975 0.51 -0.4 397,410 - A4249_RS01975 0.51 -0.0 397,410 - A4249_RS01975 0.51 -0.7 397,410 - A4249_RS01975 0.51 -0.4 397,470 - A4249_RS01975 0.55 +0.3 397,470 - A4249_RS01975 0.55 +0.2 397,524 + A4249_RS01975 0.58 -0.5 397,524 + A4249_RS01975 0.58 -0.3 397,524 + A4249_RS01975 0.58 -0.8 397,524 + A4249_RS01975 0.58 +0.2 397,524 + A4249_RS01975 0.58 +0.4 397,524 + A4249_RS01975 0.58 +0.3 397,524 + A4249_RS01975 0.58 -0.9 397,524 + A4249_RS01975 0.58 +0.5 397,524 + A4249_RS01975 0.58 +0.4 397,524 + A4249_RS01975 0.58 -1.5 397,524 + A4249_RS01975 0.58 +0.2 397,525 - A4249_RS01975 0.58 -0.2 397,525 - A4249_RS01975 0.58 +0.1 397,525 - A4249_RS01975 0.58 -0.7 397,525 - A4249_RS01975 0.58 +0.7 397,525 - A4249_RS01975 0.58 -0.4 397,525 - A4249_RS01975 0.58 +0.3 397,670 + A4249_RS01975 0.67 +0.8 397,671 - A4249_RS01975 0.68 -0.3 397,671 - A4249_RS01975 0.68 -0.4 397,706 + A4249_RS01975 0.70 -0.3 397,706 + A4249_RS01975 0.70 +0.6 397,707 - A4249_RS01975 0.70 +0.2 397,707 - A4249_RS01975 0.70 -0.7 397,707 - A4249_RS01975 0.70 +0.8 397,784 + A4249_RS01975 0.75 +1.5 397,785 - A4249_RS01975 0.75 -0.4 397,785 - A4249_RS01975 0.75 -0.6 397,785 - A4249_RS01975 0.75 -0.6 397,785 - A4249_RS01975 0.75 +1.1 397,785 - A4249_RS01975 0.75 +0.4 397,937 + A4249_RS01975 0.84 -1.0 397,937 + A4249_RS01975 0.84 +1.0 397,937 + A4249_RS01975 0.84 +0.4 397,938 - A4249_RS01975 0.85 +0.1 397,938 - A4249_RS01975 0.85 +0.6 397,964 + A4249_RS01975 0.86 -0.3 397,964 + A4249_RS01975 0.86 +0.4 397,964 + A4249_RS01975 0.86 -0.4 397,965 - A4249_RS01975 0.86 +0.6 397,965 - A4249_RS01975 0.86 -0.2 397,965 - A4249_RS01975 0.86 +0.1 397,965 - A4249_RS01975 0.86 -1.6 398,066 + -0.2 398,067 - +0.6 398,067 - -0.4 398,141 + +0.0 398,141 + +0.7 398,141 + -0.2 398,141 + -0.4 398,141 + +0.0 398,141 + -0.7 398,141 + -0.4 398,141 + +0.0 398,141 + -1.9 398,142 - -0.3 398,142 - +0.6 398,142 - -0.1 398,142 - +0.8 398,142 - +0.4 398,142 - -0.7 398,181 + +0.2 398,181 + +0.1 398,181 + -0.7 398,181 + -0.5 398,181 + -0.2 398,182 - +0.5 398,182 - -0.1 398,182 - +0.3 398,184 + -0.7 398,184 + -0.8 398,184 + -0.5 398,184 + +0.9 398,184 + -0.1 398,184 + -0.3 398,184 + +0.8 398,184 + +0.0 398,184 + -1.6 398,184 + -0.3 398,184 + +0.1 398,184 + -0.2 398,184 + +0.5 398,184 + -1.1 398,184 + -1.2 398,184 + -0.3 398,184 + -0.8 398,184 + +0.3 398,184 + +1.2 398,184 + -0.2 398,184 + +0.9 398,184 + -0.3 398,184 + +0.3 398,184 + -0.4 398,184 + +0.2 398,184 + +0.8 398,184 + +0.1 398,184 + -0.0 398,184 + +0.1 398,185 - -0.2 398,185 - -0.6 398,185 - -0.2 398,185 - +0.1 398,185 - -1.4 398,185 - -1.9 398,185 - +0.4 398,185 - -0.5 398,185 - +0.1 398,185 - -0.5 398,185 - -1.0 398,185 - +0.2 398,185 - +1.1 398,185 - -0.6 398,185 - +0.2 398,185 - +0.4 398,185 - -0.9 398,185 - +0.8 398,185 - +0.7 398,185 - +0.4 398,185 - +0.4 398,185 - -0.5 398,215 + +0.3 398,215 + -0.3 398,216 - +0.0 398,216 - +0.3 398,216 - -0.1 398,227 + +1.1 398,227 + +0.4 398,227 + +0.5 398,227 + -0.2 398,227 + -0.4 398,227 + -0.3 398,227 + -0.8 398,228 - -0.2 398,228 - +0.3 398,228 - +0.8 398,228 - +0.6 398,228 - +1.2 398,261 + +0.6 398,261 + +0.8 398,261 + -0.6 398,262 - -0.3 398,262 - -0.7 398,263 + +0.5 398,264 - +1.4 398,347 + +0.0 398,348 - +0.1 398,348 - -0.2 398,348 - -0.2 398,348 - -0.5 398,348 - +0.5 398,348 - +0.3 398,404 + -0.2 398,404 + -0.4 398,404 + +0.1 398,404 + -0.3 398,554 + A4249_RS01980 0.24 +0.0 398,554 + A4249_RS01980 0.24 -0.1 398,554 + A4249_RS01980 0.24 +0.6 398,554 + A4249_RS01980 0.24 -0.2 398,555 - A4249_RS01980 0.24 +0.9 398,555 - A4249_RS01980 0.24 +0.5 398,555 - A4249_RS01980 0.24 -0.0 398,556 + A4249_RS01980 0.24 -0.2 398,556 + A4249_RS01980 0.24 -0.8 398,764 + A4249_RS01980 0.51 +1.8 398,764 + A4249_RS01980 0.51 +2.7 398,824 + A4249_RS01980 0.59 -0.8 398,825 - A4249_RS01980 0.59 -0.4 398,825 - A4249_RS01980 0.59 +0.5 398,867 + A4249_RS01980 0.64 -1.4 398,867 + A4249_RS01980 0.64 -0.1 398,867 + A4249_RS01980 0.64 -1.7 398,868 - A4249_RS01980 0.64 -0.3 398,868 - A4249_RS01980 0.64 +1.6 398,888 + A4249_RS01980 0.67 -0.4 398,888 + A4249_RS01980 0.67 -0.1 398,889 - A4249_RS01980 0.67 +0.7 398,941 + A4249_RS01980 0.74 -0.0 398,941 + A4249_RS01980 0.74 +0.6 398,941 + A4249_RS01980 0.74 +0.4 398,941 + A4249_RS01980 0.74 -1.0 398,941 + A4249_RS01980 0.74 +0.1 398,942 - A4249_RS01980 0.74 +0.8 398,942 - A4249_RS01980 0.74 +0.0 398,942 - A4249_RS01980 0.74 +0.1 398,942 - A4249_RS01980 0.74 -0.5 399,031 - A4249_RS01980 0.85 -0.5 399,031 - A4249_RS01980 0.85 -0.7 399,031 - A4249_RS01980 0.85 +0.7 399,031 - A4249_RS01980 0.85 +1.9 399,149 + -0.5 399,149 + +0.2 399,149 + -1.0
Or see this region's nucleotide sequence