Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00300 and A4249_RS00305 overlap by 4 nucleotides A4249_RS00305 and A4249_RS00310 are separated by 100 nucleotides A4249_RS00310 and A4249_RS00315 are separated by 143 nucleotides
A4249_RS00300: A4249_RS00300 - hydroxyacylglutathione hydrolase, at 51,179 to 51,907
_RS00300
A4249_RS00305: A4249_RS00305 - DUF4908 domain-containing protein, at 51,904 to 52,620
_RS00305
A4249_RS00310: A4249_RS00310 - acetoacetyl-CoA reductase, at 52,721 to 53,446
_RS00310
A4249_RS00315: A4249_RS00315 - NAD(P)-dependent alcohol dehydrogenase, at 53,590 to 54,651
_RS00315
Position (kb) 52
53
54 Strain fitness (log2 ratio) -2
-1
0
1 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.229 kb on + strand, within A4249_RS00305 at 52.230 kb on - strand, within A4249_RS00305 at 52.734 kb on + strand at 52.734 kb on + strand at 52.734 kb on + strand at 52.734 kb on + strand at 52.734 kb on + strand at 52.773 kb on + strand at 52.774 kb on - strand at 52.774 kb on - strand at 52.774 kb on - strand at 52.909 kb on + strand, within A4249_RS00310 at 52.909 kb on + strand, within A4249_RS00310 at 52.910 kb on - strand, within A4249_RS00310 at 52.911 kb on + strand, within A4249_RS00310 at 52.912 kb on - strand, within A4249_RS00310 at 53.007 kb on + strand, within A4249_RS00310 at 53.007 kb on + strand, within A4249_RS00310 at 53.349 kb on + strand, within A4249_RS00310 at 53.350 kb on - strand, within A4249_RS00310 at 53.436 kb on - strand at 53.436 kb on - strand at 53.436 kb on - strand at 53.436 kb on - strand at 53.446 kb on + strand at 53.474 kb on + strand at 53.474 kb on + strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.475 kb on - strand at 53.611 kb on - strand at 53.657 kb on + strand at 53.657 kb on + strand at 53.657 kb on + strand at 53.657 kb on + strand at 53.658 kb on - strand at 53.658 kb on - strand at 53.658 kb on - strand at 53.658 kb on - strand at 53.658 kb on - strand at 53.658 kb on - strand at 54.072 kb on + strand, within A4249_RS00315 at 54.072 kb on + strand, within A4249_RS00315 at 54.073 kb on - strand, within A4249_RS00315 at 54.146 kb on + strand, within A4249_RS00315 at 54.146 kb on + strand, within A4249_RS00315 at 54.146 kb on + strand, within A4249_RS00315 at 54.146 kb on + strand, within A4249_RS00315 at 54.146 kb on + strand, within A4249_RS00315 at 54.147 kb on - strand, within A4249_RS00315 at 54.302 kb on + strand, within A4249_RS00315 at 54.302 kb on + strand, within A4249_RS00315 at 54.302 kb on + strand, within A4249_RS00315 at 54.302 kb on + strand, within A4249_RS00315 at 54.302 kb on + strand, within A4249_RS00315 at 54.302 kb on + strand, within A4249_RS00315 at 54.303 kb on - strand, within A4249_RS00315 at 54.303 kb on - strand, within A4249_RS00315 at 54.329 kb on + strand, within A4249_RS00315 at 54.329 kb on + strand, within A4249_RS00315
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 52,229 + A4249_RS00305 0.45 +0.7 52,229 + A4249_RS00305 0.45 +0.5 52,229 + A4249_RS00305 0.45 +1.2 52,229 + A4249_RS00305 0.45 +0.9 52,229 + A4249_RS00305 0.45 +0.8 52,229 + A4249_RS00305 0.45 -0.3 52,229 + A4249_RS00305 0.45 -1.1 52,230 - A4249_RS00305 0.45 -0.3 52,734 + -0.0 52,734 + +0.7 52,734 + -0.7 52,734 + -0.1 52,734 + -0.2 52,773 + +0.9 52,774 - +1.4 52,774 - +0.1 52,774 - -0.4 52,909 + A4249_RS00310 0.26 +0.4 52,909 + A4249_RS00310 0.26 +0.0 52,910 - A4249_RS00310 0.26 -1.3 52,911 + A4249_RS00310 0.26 -0.4 52,912 - A4249_RS00310 0.26 -0.0 53,007 + A4249_RS00310 0.39 -0.1 53,007 + A4249_RS00310 0.39 -1.2 53,349 + A4249_RS00310 0.87 -0.0 53,350 - A4249_RS00310 0.87 -0.4 53,436 - +0.1 53,436 - -2.3 53,436 - +1.5 53,436 - +0.2 53,446 + +0.4 53,474 + +0.3 53,474 + -2.3 53,475 - -0.3 53,475 - -0.5 53,475 - -0.1 53,475 - +0.5 53,475 - +0.3 53,475 - -0.3 53,475 - -1.6 53,475 - -0.3 53,475 - -0.1 53,611 - +0.3 53,657 + -0.3 53,657 + -0.9 53,657 + +0.3 53,657 + -1.3 53,658 - +0.0 53,658 - +1.5 53,658 - +0.0 53,658 - -0.6 53,658 - +0.7 53,658 - +0.4 54,072 + A4249_RS00315 0.45 -0.4 54,072 + A4249_RS00315 0.45 +0.6 54,073 - A4249_RS00315 0.45 +0.3 54,146 + A4249_RS00315 0.52 -1.0 54,146 + A4249_RS00315 0.52 +0.0 54,146 + A4249_RS00315 0.52 +0.4 54,146 + A4249_RS00315 0.52 +0.2 54,146 + A4249_RS00315 0.52 +0.1 54,147 - A4249_RS00315 0.52 +0.2 54,302 + A4249_RS00315 0.67 +0.3 54,302 + A4249_RS00315 0.67 -0.0 54,302 + A4249_RS00315 0.67 +0.6 54,302 + A4249_RS00315 0.67 +0.7 54,302 + A4249_RS00315 0.67 +0.6 54,302 + A4249_RS00315 0.67 -0.8 54,303 - A4249_RS00315 0.67 -0.3 54,303 - A4249_RS00315 0.67 +1.3 54,329 + A4249_RS00315 0.70 +0.1 54,329 + A4249_RS00315 0.70 -0.1
Or see this region's nucleotide sequence