Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00075 and A4249_RS00080 are separated by 39 nucleotides A4249_RS00080 and A4249_RS00085 are separated by 22 nucleotides A4249_RS00085 and A4249_RS00090 are separated by 119 nucleotides A4249_RS00090 and A4249_RS00095 overlap by 4 nucleotides
A4249_RS00075: A4249_RS00075 - alpha/beta hydrolase, at 12,184 to 13,131
_RS00075
A4249_RS00080: A4249_RS00080 - DUF3298 and DUF4163 domain-containing protein, at 13,171 to 13,995
_RS00080
A4249_RS00085: A4249_RS00085 - UbiA family prenyltransferase, at 14,018 to 15,049
_RS00085
A4249_RS00090: A4249_RS00090 - DUF2807 domain-containing protein, at 15,169 to 15,951
_RS00090
A4249_RS00095: A4249_RS00095 - DUF1700 domain-containing protein, at 15,948 to 16,547
_RS00095
Position (kb) 14
15
16 Strain fitness (log2 ratio) -1
0
1 at 13.018 kb on + strand, within A4249_RS00075 at 13.018 kb on + strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.019 kb on - strand, within A4249_RS00075 at 13.232 kb on + strand at 13.298 kb on + strand, within A4249_RS00080 at 13.314 kb on - strand, within A4249_RS00080 at 13.766 kb on + strand, within A4249_RS00080 at 13.766 kb on + strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.767 kb on - strand, within A4249_RS00080 at 13.832 kb on + strand, within A4249_RS00080 at 13.832 kb on + strand, within A4249_RS00080 at 13.850 kb on + strand, within A4249_RS00080 at 13.850 kb on + strand, within A4249_RS00080 at 13.851 kb on - strand, within A4249_RS00080 at 15.061 kb on - strand at 15.061 kb on - strand at 15.061 kb on - strand at 15.061 kb on - strand at 15.179 kb on + strand at 15.179 kb on + strand at 15.179 kb on + strand at 15.179 kb on + strand at 15.179 kb on + strand at 15.179 kb on + strand at 15.179 kb on + strand at 15.180 kb on - strand at 15.180 kb on - strand at 15.180 kb on - strand at 15.180 kb on - strand at 15.456 kb on - strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.692 kb on + strand, within A4249_RS00090 at 15.693 kb on - strand, within A4249_RS00090 at 15.693 kb on - strand, within A4249_RS00090 at 15.693 kb on - strand, within A4249_RS00090 at 15.693 kb on - strand, within A4249_RS00090 at 16.018 kb on + strand, within A4249_RS00095
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 13,018 + A4249_RS00075 0.88 -0.7 13,018 + A4249_RS00075 0.88 +0.3 13,019 - A4249_RS00075 0.88 -0.6 13,019 - A4249_RS00075 0.88 +1.2 13,019 - A4249_RS00075 0.88 +0.0 13,019 - A4249_RS00075 0.88 +1.0 13,232 + +0.2 13,298 + A4249_RS00080 0.15 +0.1 13,314 - A4249_RS00080 0.17 -0.2 13,766 + A4249_RS00080 0.72 +1.7 13,766 + A4249_RS00080 0.72 +0.2 13,767 - A4249_RS00080 0.72 -0.0 13,767 - A4249_RS00080 0.72 -0.2 13,767 - A4249_RS00080 0.72 +0.8 13,767 - A4249_RS00080 0.72 -0.5 13,767 - A4249_RS00080 0.72 +0.3 13,767 - A4249_RS00080 0.72 -0.5 13,832 + A4249_RS00080 0.80 +0.9 13,832 + A4249_RS00080 0.80 -1.0 13,850 + A4249_RS00080 0.82 +0.2 13,850 + A4249_RS00080 0.82 +1.1 13,851 - A4249_RS00080 0.82 -0.5 15,061 - -0.3 15,061 - +0.0 15,061 - +0.3 15,061 - -1.2 15,179 + +0.4 15,179 + +0.3 15,179 + +0.6 15,179 + -0.9 15,179 + +0.2 15,179 + +0.1 15,179 + -0.2 15,180 - +0.1 15,180 - -0.4 15,180 - +0.3 15,180 - -0.6 15,456 - A4249_RS00090 0.37 -1.5 15,692 + A4249_RS00090 0.67 -0.3 15,692 + A4249_RS00090 0.67 +0.6 15,692 + A4249_RS00090 0.67 +0.1 15,692 + A4249_RS00090 0.67 +0.0 15,692 + A4249_RS00090 0.67 +0.9 15,692 + A4249_RS00090 0.67 +0.6 15,692 + A4249_RS00090 0.67 +0.4 15,692 + A4249_RS00090 0.67 -0.8 15,692 + A4249_RS00090 0.67 -0.3 15,692 + A4249_RS00090 0.67 -1.1 15,692 + A4249_RS00090 0.67 +1.0 15,693 - A4249_RS00090 0.67 +0.6 15,693 - A4249_RS00090 0.67 -1.3 15,693 - A4249_RS00090 0.67 +0.5 15,693 - A4249_RS00090 0.67 +0.8 16,018 + A4249_RS00095 0.12 -0.8
Or see this region's nucleotide sequence