Strain Fitness in Erwinia amylovora T8 around OLJFJH_16955

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
3,585,040	-		OLJFJH_16950	0.79	-1.7
3,585,113	-		OLJFJH_16950	0.82	-1.1
3,585,115	-		OLJFJH_16950	0.82	-1.1
3,585,115	-		OLJFJH_16950	0.82	-0.7
3,585,723	-				-0.8
3,585,814	-				+0.1
3,585,933	-		OLJFJH_16955	0.10	-0.3
3,585,950	-		OLJFJH_16955	0.13	-3.1
3,585,950	-		OLJFJH_16955	0.13	-2.0
3,585,969	-		OLJFJH_16955	0.15	-0.8
3,586,236	+		OLJFJH_16955	0.52	-1.0
3,586,352	-		OLJFJH_16955	0.69	-0.7
3,586,352	-		OLJFJH_16955	0.69	-1.5
3,586,583	-				-0.0
3,586,583	-				-0.7
3,586,595	+				-0.3
3,586,596	-				+0.7
3,586,596	-				-0.1
3,586,596	-				+1.4
3,586,700	-				-1.3
3,587,131	+		OLJFJH_16960	0.30	+0.3
3,587,132	-		OLJFJH_16960	0.30	-2.0
3,587,132	-		OLJFJH_16960	0.30	-1.0
3,587,297	+		OLJFJH_16960	0.40	-0.5
3,587,297	+		OLJFJH_16960	0.40	-0.7
3,587,298	-		OLJFJH_16960	0.40	-1.7
3,587,298	-		OLJFJH_16960	0.40	+0.1
3,587,544	+		OLJFJH_16960	0.54	-0.3