Strain Fitness in Erwinia amylovora T8 around OLJFJH_15705

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
3,307,730	+		OLJFJH_15700	0.30	-0.2
3,307,785	-		OLJFJH_15700	0.35	-1.8
3,307,805	-		OLJFJH_15700	0.37	-0.2
3,307,874	-		OLJFJH_15700	0.43	-1.1
3,307,878	-		OLJFJH_15700	0.44	+1.3
3,307,988	-		OLJFJH_15700	0.54	-0.7
3,308,121	-		OLJFJH_15700	0.67	+0.8
3,308,160	-		OLJFJH_15700	0.71	+0.8
3,308,333	-		OLJFJH_15700	0.87	-0.8
3,308,375	-				-0.2
3,308,474	-				-1.1
3,308,474	-				+0.0
3,308,517	-				+1.3
3,308,517	-				-3.4
3,308,517	-				+0.8
3,308,517	-				-0.6
3,308,519	+				-2.0
3,308,528	+				+0.5
3,308,548	-				+0.3
3,308,548	-				+0.5
3,308,553	+				-0.4
3,308,553	+				+0.7
3,308,554	-				+0.2
3,308,554	-				-0.4
3,308,554	-				-0.5
3,308,614	+				+0.9
3,308,614	+				+0.4
3,308,615	-				+0.1
3,308,615	-				-1.9
3,308,615	-				-1.6
3,308,615	-				+0.0
3,308,741	+				-0.5
3,308,987	+		OLJFJH_15705	0.34	+0.4
3,309,014	-		OLJFJH_15705	0.37	-0.0
3,309,014	-		OLJFJH_15705	0.37	-0.2
3,309,182	+		OLJFJH_15705	0.55	-1.6
3,309,182	+		OLJFJH_15705	0.55	-1.3
3,309,182	+		OLJFJH_15705	0.55	-1.1
3,309,182	+		OLJFJH_15705	0.55	-1.2
3,309,183	-		OLJFJH_15705	0.55	-1.1
3,309,194	+		OLJFJH_15705	0.56	-1.8
3,309,347	+		OLJFJH_15705	0.73	-0.7
3,309,347	+		OLJFJH_15705	0.73	-0.3
3,309,501	-		OLJFJH_15705	0.90	-1.1
3,309,538	-				+1.5
3,309,538	-				-0.7
3,309,594	+				+0.7
3,309,594	+				+0.7
3,309,594	+				+0.3
3,309,595	-				+0.4
3,309,603	+				+0.5
3,309,654	-				+2.1
3,309,746	+				-0.2
3,309,746	+				+0.4
3,309,757	+				+0.7
3,309,757	+				-0.1
3,309,831	-		OLJFJH_15710	0.13	-0.4
3,309,831	-		OLJFJH_15710	0.13	-0.1
3,309,896	+		OLJFJH_15710	0.29	-0.2
3,309,897	-		OLJFJH_15710	0.30	-0.9
3,310,192	+				+0.3
3,310,193	-				+0.1
3,310,193	-				+0.3
3,310,268	+		OLJFJH_15715	0.32	-0.1
3,310,321	+		OLJFJH_15715	0.54	-0.4
3,310,322	-		OLJFJH_15715	0.55	-0.1
3,310,394	+		OLJFJH_15715	0.85	-1.1
3,310,395	-		OLJFJH_15715	0.85	+1.1
3,310,417	-				-0.1
3,310,418	+				+0.1
3,310,419	-				+0.7
3,310,419	-				-2.2
3,310,435	+				-0.4
3,310,512	+				+0.4
3,310,512	+				-2.4
3,310,513	-				+2.2
3,310,516	+				-0.2
3,310,516	+				-0.2
3,310,517	-				+1.3
3,310,517	-				-0.2
3,310,521	-				+0.1
3,310,566	-				+0.7
3,310,584	+				+1.2
3,310,585	-				-0.4