Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_14360 and OLJFJH_14365 overlap by 1 nucleotides OLJFJH_14365 and OLJFJH_14370 overlap by 8 nucleotides OLJFJH_14370 and OLJFJH_14375 are separated by 0 nucleotides
OLJFJH_14360: OLJFJH_14360 - electron transport complex subunit RsxA, at 3,035,032 to 3,035,613
_14360
OLJFJH_14365: OLJFJH_14365 - electron transport complex subunit RsxB, at 3,035,613 to 3,036,188
_14365
OLJFJH_14370: OLJFJH_14370 - electron transport complex subunit RsxC, at 3,036,181 to 3,038,541
_14370
OLJFJH_14375: OLJFJH_14375 - electron transport complex subunit RsxD, at 3,038,542 to 3,039,603
_14375
Position (kb)
3036
3037
3038
3039 Strain fitness (log2 ratio)
-1
0
1 at 3035.260 kb on + strand, within OLJFJH_14360 at 3035.861 kb on + strand, within OLJFJH_14365 at 3035.995 kb on + strand, within OLJFJH_14365 at 3036.149 kb on + strand at 3036.172 kb on + strand at 3036.712 kb on + strand, within OLJFJH_14370 at 3037.450 kb on + strand, within OLJFJH_14370 at 3037.483 kb on + strand, within OLJFJH_14370 at 3037.483 kb on + strand, within OLJFJH_14370 at 3037.713 kb on + strand, within OLJFJH_14370 at 3038.539 kb on + strand at 3038.571 kb on + strand at 3038.577 kb on + strand at 3039.017 kb on + strand, within OLJFJH_14375 at 3039.423 kb on + strand, within OLJFJH_14375
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7 remove 3,035,260 + OLJFJH_14360 0.39 -0.2 3,035,861 + OLJFJH_14365 0.43 -0.5 3,035,995 + OLJFJH_14365 0.66 -0.9 3,036,149 + +0.1 3,036,172 + +0.2 3,036,712 + OLJFJH_14370 0.22 -1.2 3,037,450 + OLJFJH_14370 0.54 -0.9 3,037,483 + OLJFJH_14370 0.55 -0.9 3,037,483 + OLJFJH_14370 0.55 -1.7 3,037,713 + OLJFJH_14370 0.65 +0.7 3,038,539 + -1.6 3,038,571 + -0.7 3,038,577 + -0.7 3,039,017 + OLJFJH_14375 0.45 -0.6 3,039,423 + OLJFJH_14375 0.83 +0.5
Or see this region's nucleotide sequence