Strain Fitness in Erwinia amylovora T8 around OLJFJH_13335

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-7
2,805,240	+		OLJFJH_13325	0.74	-0.1
2,805,240	+		OLJFJH_13325	0.74	-0.2
2,805,241	-		OLJFJH_13325	0.74	+0.2
2,805,241	-		OLJFJH_13325	0.74	-0.4
2,805,261	+		OLJFJH_13325	0.75	-1.0
2,805,261	+		OLJFJH_13325	0.75	+0.1
2,805,261	+		OLJFJH_13325	0.75	-0.5
2,805,262	-		OLJFJH_13325	0.75	-2.0
2,805,262	-		OLJFJH_13325	0.75	-1.8
2,805,378	+		OLJFJH_13325	0.82	-0.6
2,805,378	+		OLJFJH_13325	0.82	+0.7
2,805,756	-		OLJFJH_13330	0.20	+0.6
2,805,832	+		OLJFJH_13330	0.34	-1.2
2,806,035	+		OLJFJH_13330	0.73	-0.2
2,806,383	+		OLJFJH_13335	0.42	-0.8
2,806,640	+				+0.7
2,806,642	+				-0.1
2,806,643	-				+0.3
2,806,643	-				-1.1
2,806,643	-				+0.4
2,806,643	-				-0.8
2,806,788	-				+3.5
2,806,852	+				-1.6
2,806,852	+				-0.8
2,806,853	-				-0.8
2,807,061	+		OLJFJH_13340	0.30	-0.2
2,807,061	+		OLJFJH_13340	0.30	-0.2
2,807,062	-		OLJFJH_13340	0.31	-0.7
2,807,197	+		OLJFJH_13340	0.46	-0.2
2,807,323	+		OLJFJH_13340	0.60	-0.1
2,807,323	+		OLJFJH_13340	0.60	-0.5
2,807,324	-		OLJFJH_13340	0.60	-1.0
2,807,324	-		OLJFJH_13340	0.60	-0.2
2,807,324	-		OLJFJH_13340	0.60	-4.3